RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 IGHV6-1A0A0B4J1U7 121 aa8.1□□□□□ -1.11
THBS3-202ENST00000428962 CYP4F30PQ9H0H9 118 aa8.1□□□□□ -1.11
THBS3-202ENST00000428962 KRTAP10-1P60331 282 aa8.08□□□□□ -1.12
THBS3-202ENST00000428962 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
THBS3-202ENST00000428962 SEC61GP60059 68 aa8.07□□□□□ -1.12
THBS3-202ENST00000428962 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
THBS3-202ENST00000428962 FAM229BQ4G0N7 80 aa8.06□□□□□ -1.12
THBS3-202ENST00000428962 MRPL34Q9BQ48 92 aaKnown RBP8.06□□□□□ -1.12
THBS3-202ENST00000428962 MPLKIPQ8TAP9 179 aa8.04□□□□□ -1.12
THBS3-202ENST00000428962 NDUFS5O43920 106 aa8.03□□□□□ -1.12
THBS3-202ENST00000428962 DNAH8Q96JB1 4490 aa8.03□□□□□ -1.12
THBS3-202ENST00000428962 Q1T7F1 81 aa8.03□□□□□ -1.12
THBS3-202ENST00000428962 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
THBS3-202ENST00000428962 EPPK1P58107 5090 aaKnown RBP8.01□□□□□ -1.13
THBS3-202ENST00000428962 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
THBS3-202ENST00000428962 PRR4Q16378 134 aa8.01□□□□□ -1.13
THBS3-202ENST00000428962 FRAS1Q86XX4 4008 aa7.99□□□□□ -1.13
THBS3-202ENST00000428962 A0A087X002 238 aa7.98□□□□□ -1.13
THBS3-202ENST00000428962 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
THBS3-202ENST00000428962 NOTCH2NLQ7Z3S9 236 aa7.96□□□□□ -1.13
THBS3-202ENST00000428962 PMAIP1Q13794 54 aa7.96□□□□□ -1.14
THBS3-202ENST00000428962 BIRC6Q9NR09 4857 aa7.95□□□□□ -1.14
THBS3-202ENST00000428962 LIMD2Q9BT23 127 aa7.95□□□□□ -1.14
THBS3-202ENST00000428962 IGLV7-46A0A075B6I9 117 aa7.94□□□□□ -1.14
THBS3-202ENST00000428962 KRTAP1-4P0C5Y4 121 aa7.93□□□□□ -1.14
THBS3-202ENST00000428962 DNAH11Q96DT5 4516 aa7.93□□□□□ -1.14
THBS3-202ENST00000428962 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
THBS3-202ENST00000428962 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
THBS3-202ENST00000428962 PCOTHQ58A44 107 aa7.92□□□□□ -1.14
THBS3-202ENST00000428962 LINC00313P59037 77 aa7.9□□□□□ -1.14
THBS3-202ENST00000428962 A0A1B0GVY2 172 aa7.89□□□□□ -1.15
THBS3-202ENST00000428962 PKD1P98161 4303 aa7.88□□□□□ -1.15
THBS3-202ENST00000428962 C4orf48Q5BLP8 95 aa7.88□□□□□ -1.15
THBS3-202ENST00000428962 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
THBS3-202ENST00000428962 FAT2Q9NYQ8 4349 aa7.86□□□□□ -1.15
THBS3-202ENST00000428962 TYMSOSQ8TAI1 123 aa7.86□□□□□ -1.15
THBS3-202ENST00000428962 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
THBS3-202ENST00000428962 FAM229AH3BQW9 127 aa7.84□□□□□ -1.15
THBS3-202ENST00000428962 SPINK1P00995 79 aa7.84□□□□□ -1.15
THBS3-202ENST00000428962 COA5Q86WW8 74 aa7.84□□□□□ -1.15
THBS3-202ENST00000428962 Q5W150 140 aa7.83□□□□□ -1.16
THBS3-202ENST00000428962 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
THBS3-202ENST00000428962 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
THBS3-202ENST00000428962 PSPHP1O15172 72 aa7.78□□□□□ -1.16
THBS3-202ENST00000428962 KRTAP16-1A8MUX0 517 aa7.78□□□□□ -1.16
THBS3-202ENST00000428962 SPAG11AQ6PDA7 123 aa7.78□□□□□ -1.16
THBS3-202ENST00000428962 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.17
THBS3-202ENST00000428962 LINC00304Q8N9R0 145 aa7.76□□□□□ -1.17
THBS3-202ENST00000428962 PKHD1P08F94 4074 aa7.76□□□□□ -1.17
THBS3-202ENST00000428962 Q5VV11 94 aa7.74□□□□□ -1.17
THBS3-202ENST00000428962 A8MUN3 132 aa7.73□□□□□ -1.17
THBS3-202ENST00000428962 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
THBS3-202ENST00000428962 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
THBS3-202ENST00000428962 HRES1P13985 223 aa7.73□□□□□ -1.17
THBS3-202ENST00000428962 VPS13BQ7Z7G8 4022 aa7.72□□□□□ -1.17
THBS3-202ENST00000428962 KTN1-AS1Q86SY8 53 aa7.71□□□□□ -1.17
THBS3-202ENST00000428962 DYNC1H1Q14204 4646 aaKnown RBP7.71□□□□□ -1.17
THBS3-202ENST00000428962 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.18
THBS3-202ENST00000428962 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
THBS3-202ENST00000428962 KIAA1109Q2LD37 5005 aa7.7□□□□□ -1.18
THBS3-202ENST00000428962 HERC2O95714 4834 aa7.69□□□□□ -1.18
THBS3-202ENST00000428962 ACYP2P14621 99 aa7.69□□□□□ -1.18
THBS3-202ENST00000428962 ATP11AUNQ6ZP68 121 aa7.69□□□□□ -1.18
THBS3-202ENST00000428962 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
THBS3-202ENST00000428962 Q75L30 129 aa7.68□□□□□ -1.18
THBS3-202ENST00000428962 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
THBS3-202ENST00000428962 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
THBS3-202ENST00000428962 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
THBS3-202ENST00000428962 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
THBS3-202ENST00000428962 IGKV2D-30A0A075B6S6 120 aa7.62□□□□□ -1.19
THBS3-202ENST00000428962 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.19
THBS3-202ENST00000428962 KRTAP17-1Q9BYP8 105 aa7.59□□□□□ -1.19
THBS3-202ENST00000428962 RYR1P21817 5038 aa7.59□□□□□ -1.2
THBS3-202ENST00000428962 HSPG2P98160 4391 aa7.58□□□□□ -1.2
THBS3-202ENST00000428962 Q8N1X5 172 aa7.58□□□□□ -1.2
THBS3-202ENST00000428962 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
THBS3-202ENST00000428962 A6NN06 94 aa7.57□□□□□ -1.2
THBS3-202ENST00000428962 A6NED7 52 aa7.57□□□□□ -1.2
THBS3-202ENST00000428962 C7orf65Q6ZTY9 151 aa7.57□□□□□ -1.2
THBS3-202ENST00000428962 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
THBS3-202ENST00000428962 LCA10Q71F78 164 aa7.56□□□□□ -1.2
THBS3-202ENST00000428962 A8MU10 97 aa7.55□□□□□ -1.2
THBS3-202ENST00000428962 SPTSSBQ8NFR3 76 aa7.55□□□□□ -1.2
THBS3-202ENST00000428962 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
THBS3-202ENST00000428962 C20orf166-AS1Q96NR2 134 aa7.52□□□□□ -1.21
THBS3-202ENST00000428962 A8MUU9 505 aa7.51□□□□□ -1.21
THBS3-202ENST00000428962 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
THBS3-202ENST00000428962 C9orf92A6NGG3 77 aa7.49□□□□□ -1.21
THBS3-202ENST00000428962 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.21
THBS3-202ENST00000428962 Q5VSD8 79 aa7.46□□□□□ -1.21
THBS3-202ENST00000428962 ABCA13Q86UQ4 5058 aa7.44□□□□□ -1.22
THBS3-202ENST00000428962 A0A1B0GU69 56 aa7.42□□□□□ -1.22
THBS3-202ENST00000428962 SPINK7P58062 85 aa7.41□□□□□ -1.22
THBS3-202ENST00000428962 FAT1Q14517 4588 aa7.4□□□□□ -1.22
THBS3-202ENST00000428962 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
THBS3-202ENST00000428962 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.24
THBS3-202ENST00000428962 UQCR11O14957 56 aa7.27□□□□□ -1.25
THBS3-202ENST00000428962 J3QL48 77 aa7.24□□□□□ -1.25
THBS3-202ENST00000428962 SPATA8Q6RVD6 105 aa7.24□□□□□ -1.25
THBS3-202ENST00000428962 RPL37P61927 97 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms