RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 LIMD2Q9BT23 127 aa5.02□□□□□ -1.61
SMC6-204ENST00000428868 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
SMC6-204ENST00000428868 OXTP01178 125 aa5.01□□□□□ -1.61
SMC6-204ENST00000428868 CXCL6P80162 114 aa5.01□□□□□ -1.61
SMC6-204ENST00000428868 ATP5EP2Q5VTU8 51 aa5.01□□□□□ -1.61
SMC6-204ENST00000428868 RPS29P62273 56 aaKnown RBP5□□□□□ -1.61
SMC6-204ENST00000428868 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
SMC6-204ENST00000428868 HIST1H4AP62805 103 aaKnown RBP4.99□□□□□ -1.61
SMC6-204ENST00000428868 A8MWP4 228 aa4.98□□□□□ -1.61
SMC6-204ENST00000428868 NOTCH2NLQ7Z3S9 236 aa4.98□□□□□ -1.61
SMC6-204ENST00000428868 A0A1B0GVX0 72 aa4.96□□□□□ -1.62
SMC6-204ENST00000428868 J3KT08 172 aa4.96□□□□□ -1.62
SMC6-204ENST00000428868 PRR15Q8IV56 129 aa4.96□□□□□ -1.62
SMC6-204ENST00000428868 IGHV6-1A0A0B4J1U7 121 aa4.95□□□□□ -1.62
SMC6-204ENST00000428868 MMP24-AS1A0A0U1RRL7 71 aa4.95□□□□□ -1.62
SMC6-204ENST00000428868 LCE2BO14633 110 aa4.95□□□□□ -1.62
SMC6-204ENST00000428868 IMUPQ9GZP8 106 aa4.94□□□□□ -1.62
SMC6-204ENST00000428868 LPAP08519 4548 aa4.93□□□□□ -1.62
SMC6-204ENST00000428868 FAM236AA0A1B0GUQ0 79 aa4.93□□□□□ -1.62
SMC6-204ENST00000428868 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
SMC6-204ENST00000428868 WFDC13Q8IUB5 93 aa4.93□□□□□ -1.62
SMC6-204ENST00000428868 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
SMC6-204ENST00000428868 C9orf92A6NGG3 77 aa4.91□□□□□ -1.62
SMC6-204ENST00000428868 HCG22E2RYF7 251 aa4.91□□□□□ -1.62
SMC6-204ENST00000428868 NDUFB1O75438 58 aa4.91□□□□□ -1.62
SMC6-204ENST00000428868 RNF213Q63HN8 5207 aa4.9□□□□□ -1.62
SMC6-204ENST00000428868 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
SMC6-204ENST00000428868 CASC2Q6XLA1 102 aa4.89□□□□□ -1.63
SMC6-204ENST00000428868 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
SMC6-204ENST00000428868 LINC00313P59037 77 aa4.88□□□□□ -1.63
SMC6-204ENST00000428868 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
SMC6-204ENST00000428868 PRR4Q16378 134 aa4.87□□□□□ -1.63
SMC6-204ENST00000428868 IGLV7-46A0A075B6I9 117 aa4.86□□□□□ -1.63
SMC6-204ENST00000428868 FP248Q71RG6 208 aaPredicted RBP4.86□□□□□ -1.63
SMC6-204ENST00000428868 TMEM254Q8TBM7 123 aa4.86□□□□□ -1.63
SMC6-204ENST00000428868 SCGB1A1P11684 91 aa4.85□□□□□ -1.63
SMC6-204ENST00000428868 MRPL34Q9BQ48 92 aaKnown RBP4.85□□□□□ -1.63
SMC6-204ENST00000428868 KRTAP13-3Q3SY46 172 aa4.84□□□□□ -1.63
SMC6-204ENST00000428868 LRP2P98164 4655 aa4.83□□□□□ -1.64
SMC6-204ENST00000428868 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
SMC6-204ENST00000428868 ATOX1O00244 68 aa4.82□□□□□ -1.64
SMC6-204ENST00000428868 NDUFS5O43920 106 aa4.81□□□□□ -1.64
SMC6-204ENST00000428868 XP32Q5T750 250 aa4.8□□□□□ -1.64
SMC6-204ENST00000428868 Q8N9P0 234 aaPredicted RBP4.8□□□□□ -1.64
SMC6-204ENST00000428868 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
SMC6-204ENST00000428868 A8MUU9 505 aa4.79□□□□□ -1.64
SMC6-204ENST00000428868 Q5W150 140 aa4.79□□□□□ -1.64
SMC6-204ENST00000428868 ANAPC13Q9BS18 74 aa4.79□□□□□ -1.64
SMC6-204ENST00000428868 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
SMC6-204ENST00000428868 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
SMC6-204ENST00000428868 TRAV7A0A075B6U4 112 aa4.77□□□□□ -1.65
SMC6-204ENST00000428868 SERP2Q8N6R1 65 aa4.76□□□□□ -1.65
SMC6-204ENST00000428868 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
SMC6-204ENST00000428868 H0Y9P7 68 aa4.74□□□□□ -1.65
SMC6-204ENST00000428868 UQCRQO14949 82 aa4.74□□□□□ -1.65
SMC6-204ENST00000428868 COX7CP15954 63 aa4.74□□□□□ -1.65
SMC6-204ENST00000428868 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
SMC6-204ENST00000428868 Q75L30 129 aa4.74□□□□□ -1.65
SMC6-204ENST00000428868 SMIM20Q8N5G0 67 aa4.74□□□□□ -1.65
SMC6-204ENST00000428868 PCP4P48539 62 aa4.73□□□□□ -1.65
SMC6-204ENST00000428868 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
SMC6-204ENST00000428868 CYSTM1Q9H1C7 97 aa4.73□□□□□ -1.65
SMC6-204ENST00000428868 TP53AIP1Q9HCN2 124 aa4.73□□□□□ -1.65
SMC6-204ENST00000428868 TRAV22A0A0B4J277 110 aa4.72□□□□□ -1.65
SMC6-204ENST00000428868 ZCCHC13Q8WW36 166 aaKnown RBP4.72□□□□□ -1.65
SMC6-204ENST00000428868 C20orf197Q8N268 126 aa4.71□□□□□ -1.66
SMC6-204ENST00000428868 SNURFQ9Y675 71 aa4.71□□□□□ -1.66
SMC6-204ENST00000428868 A0A0U1RQV1 116 aa4.69□□□□□ -1.66
SMC6-204ENST00000428868 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
SMC6-204ENST00000428868 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
SMC6-204ENST00000428868 LINC00208Q96KT6 92 aa4.69□□□□□ -1.66
SMC6-204ENST00000428868 C5orf47Q569G3 176 aa4.68□□□□□ -1.66
SMC6-204ENST00000428868 PCOTHQ58A44 107 aa4.68□□□□□ -1.66
SMC6-204ENST00000428868 MP68P56378 58 aa4.67□□□□□ -1.66
SMC6-204ENST00000428868 C1orf64Q8NEQ6 169 aa4.67□□□□□ -1.66
SMC6-204ENST00000428868 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
SMC6-204ENST00000428868 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
SMC6-204ENST00000428868 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
SMC6-204ENST00000428868 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
SMC6-204ENST00000428868 ATP11AUNQ6ZP68 121 aa4.65□□□□□ -1.67
SMC6-204ENST00000428868 KRTAP4-1Q9BYQ7 146 aa4.64□□□□□ -1.67
SMC6-204ENST00000428868 LOC101927531A0A1B0GV80 90 aa4.63□□□□□ -1.67
SMC6-204ENST00000428868 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
SMC6-204ENST00000428868 H3BPC8 53 aa4.62□□□□□ -1.67
SMC6-204ENST00000428868 H7BZZ5 65 aa4.61□□□□□ -1.67
SMC6-204ENST00000428868 SPINK7P58062 85 aa4.61□□□□□ -1.67
SMC6-204ENST00000428868 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
SMC6-204ENST00000428868 C7orf65Q6ZTY9 151 aa4.6□□□□□ -1.67
SMC6-204ENST00000428868 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.67
SMC6-204ENST00000428868 HRES1P13985 223 aa4.58□□□□□ -1.68
SMC6-204ENST00000428868 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
SMC6-204ENST00000428868 MUC2Q02817 5179 aa4.54□□□□□ -1.68
SMC6-204ENST00000428868 C4orf26Q17RF5 130 aa4.54□□□□□ -1.68
SMC6-204ENST00000428868 NDUFC1O43677 76 aa4.52□□□□□ -1.69
SMC6-204ENST00000428868 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
SMC6-204ENST00000428868 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
SMC6-204ENST00000428868 FAM236DA0A1B0GTK5 79 aa4.5□□□□□ -1.69
SMC6-204ENST00000428868 FAM236CP0DP71 79 aa4.5□□□□□ -1.69
SMC6-204ENST00000428868 TMEM258P61165 79 aa4.5□□□□□ -1.69
SMC6-204ENST00000428868 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms