RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
NCBP2-205ENST00000428425 EPPK1P58107 5090 aaKnown RBP8.05□□□□□ -1.12
NCBP2-205ENST00000428425 H0Y9P7 68 aa8.03□□□□□ -1.12
NCBP2-205ENST00000428425 CD164Q04900 197 aa8.03□□□□□ -1.12
NCBP2-205ENST00000428425 LINC00208Q96KT6 92 aa8.03□□□□□ -1.12
NCBP2-205ENST00000428425 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
NCBP2-205ENST00000428425 CDK2AP2O75956 126 aa8.02□□□□□ -1.13
NCBP2-205ENST00000428425 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
NCBP2-205ENST00000428425 FAT1Q14517 4588 aa8.02□□□□□ -1.13
NCBP2-205ENST00000428425 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
NCBP2-205ENST00000428425 MP68P56378 58 aa8.01□□□□□ -1.13
NCBP2-205ENST00000428425 FAM229BQ4G0N7 80 aa8.01□□□□□ -1.13
NCBP2-205ENST00000428425 ATP5EP56381 51 aaPredicted RBP7.99□□□□□ -1.13
NCBP2-205ENST00000428425 PRR4Q16378 134 aa7.99□□□□□ -1.13
NCBP2-205ENST00000428425 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
NCBP2-205ENST00000428425 PLA2G1BP04054 148 aaKnown RBP7.98□□□□□ -1.13
NCBP2-205ENST00000428425 NDUFS5O43920 106 aa7.97□□□□□ -1.13
NCBP2-205ENST00000428425 MRPL34Q9BQ48 92 aaKnown RBP7.97□□□□□ -1.13
NCBP2-205ENST00000428425 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
NCBP2-205ENST00000428425 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
NCBP2-205ENST00000428425 Q5XG85 94 aa7.95□□□□□ -1.14
NCBP2-205ENST00000428425 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
NCBP2-205ENST00000428425 TYMSOSQ8TAI1 123 aa7.91□□□□□ -1.14
NCBP2-205ENST00000428425 TP53AIP1Q9HCN2 124 aa7.91□□□□□ -1.14
NCBP2-205ENST00000428425 H3BPC8 53 aa7.91□□□□□ -1.14
NCBP2-205ENST00000428425 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
NCBP2-205ENST00000428425 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
NCBP2-205ENST00000428425 C4orf26Q17RF5 130 aa7.9□□□□□ -1.15
NCBP2-205ENST00000428425 Q5W150 140 aa7.89□□□□□ -1.15
NCBP2-205ENST00000428425 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
NCBP2-205ENST00000428425 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
NCBP2-205ENST00000428425 SMIM26A0A096LP01 95 aa7.85□□□□□ -1.15
NCBP2-205ENST00000428425 LINC00313P59037 77 aa7.85□□□□□ -1.15
NCBP2-205ENST00000428425 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
NCBP2-205ENST00000428425 C8orf87E5RJ46 101 aa7.84□□□□□ -1.15
NCBP2-205ENST00000428425 LIMD2Q9BT23 127 aa7.84□□□□□ -1.15
NCBP2-205ENST00000428425 HERC2O95714 4834 aa7.84□□□□□ -1.15
NCBP2-205ENST00000428425 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
NCBP2-205ENST00000428425 KRTAP16-1A8MUX0 517 aa7.82□□□□□ -1.16
NCBP2-205ENST00000428425 SPINK1P00995 79 aa7.82□□□□□ -1.16
NCBP2-205ENST00000428425 PKHD1L1Q86WI1 4243 aa7.81□□□□□ -1.16
NCBP2-205ENST00000428425 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
NCBP2-205ENST00000428425 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
NCBP2-205ENST00000428425 RETNLBQ9BQ08 111 aa7.81□□□□□ -1.16
NCBP2-205ENST00000428425 MPLKIPQ8TAP9 179 aa7.79□□□□□ -1.16
NCBP2-205ENST00000428425 Q8N9P0 234 aaPredicted RBP7.79□□□□□ -1.16
NCBP2-205ENST00000428425 IGLV7-46A0A075B6I9 117 aa7.77□□□□□ -1.17
NCBP2-205ENST00000428425 HSPG2P98160 4391 aa7.75□□□□□ -1.17
NCBP2-205ENST00000428425 PRO0628Q9UI54 55 aa7.74□□□□□ -1.17
NCBP2-205ENST00000428425 RYR1P21817 5038 aa7.73□□□□□ -1.17
NCBP2-205ENST00000428425 KIAA1109Q2LD37 5005 aa7.73□□□□□ -1.17
NCBP2-205ENST00000428425 LOC101927531A0A1B0GV80 90 aa7.73□□□□□ -1.17
NCBP2-205ENST00000428425 LRP1Q07954 4544 aaKnown RBP7.73□□□□□ -1.17
NCBP2-205ENST00000428425 SPAG11AQ6PDA7 123 aa7.71□□□□□ -1.18
NCBP2-205ENST00000428425 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
NCBP2-205ENST00000428425 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
NCBP2-205ENST00000428425 Q8N1X5 172 aa7.7□□□□□ -1.18
NCBP2-205ENST00000428425 COA5Q86WW8 74 aa7.68□□□□□ -1.18
NCBP2-205ENST00000428425 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
NCBP2-205ENST00000428425 SEC61GP60059 68 aa7.68□□□□□ -1.18
NCBP2-205ENST00000428425 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
NCBP2-205ENST00000428425 FLG2Q5D862 2391 aaPredicted RBP7.64□□□□□ -1.19
NCBP2-205ENST00000428425 HRES1P13985 223 aa7.64□□□□□ -1.19
NCBP2-205ENST00000428425 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
NCBP2-205ENST00000428425 TNXBP22105 4242 aa7.64□□□□□ -1.19
NCBP2-205ENST00000428425 C9orf92A6NGG3 77 aa7.64□□□□□ -1.19
NCBP2-205ENST00000428425 Q1T7F1 81 aa7.64□□□□□ -1.19
NCBP2-205ENST00000428425 Q5VSD8 79 aa7.63□□□□□ -1.19
NCBP2-205ENST00000428425 IGKV2D-30A0A075B6S6 120 aa7.61□□□□□ -1.19
NCBP2-205ENST00000428425 PSPHP1O15172 72 aa7.6□□□□□ -1.19
NCBP2-205ENST00000428425 FAT3Q8TDW7 4589 aa7.58□□□□□ -1.2
NCBP2-205ENST00000428425 V9GYY9 64 aa7.57□□□□□ -1.2
NCBP2-205ENST00000428425 MYCBP2O75592 4640 aa7.56□□□□□ -1.2
NCBP2-205ENST00000428425 A8MUN3 132 aa7.56□□□□□ -1.2
NCBP2-205ENST00000428425 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
NCBP2-205ENST00000428425 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
NCBP2-205ENST00000428425 ABCA13Q86UQ4 5058 aa7.52□□□□□ -1.21
NCBP2-205ENST00000428425 A8MUU9 505 aa7.51□□□□□ -1.21
NCBP2-205ENST00000428425 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
NCBP2-205ENST00000428425 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
NCBP2-205ENST00000428425 PCLOQ9Y6V0 5065 aa7.5□□□□□ -1.21
NCBP2-205ENST00000428425 Q5VV11 94 aa7.5□□□□□ -1.21
NCBP2-205ENST00000428425 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
NCBP2-205ENST00000428425 ACYP2P14621 99 aa7.49□□□□□ -1.21
NCBP2-205ENST00000428425 PRR15LQ9BU68 103 aa7.48□□□□□ -1.21
NCBP2-205ENST00000428425 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.22
NCBP2-205ENST00000428425 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
NCBP2-205ENST00000428425 MT1HL1P0DM35 61 aa7.42□□□□□ -1.22
NCBP2-205ENST00000428425 A8MU10 97 aa7.41□□□□□ -1.22
NCBP2-205ENST00000428425 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
NCBP2-205ENST00000428425 Q75L30 129 aa7.37□□□□□ -1.23
NCBP2-205ENST00000428425 SPINK7P58062 85 aa7.36□□□□□ -1.23
NCBP2-205ENST00000428425 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
NCBP2-205ENST00000428425 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
NCBP2-205ENST00000428425 XP32Q5T750 250 aa7.31□□□□□ -1.24
NCBP2-205ENST00000428425 J3QL48 77 aa7.3□□□□□ -1.24
NCBP2-205ENST00000428425 A6NED7 52 aa7.29□□□□□ -1.24
NCBP2-205ENST00000428425 LCA10Q71F78 164 aa7.28□□□□□ -1.24
NCBP2-205ENST00000428425 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
NCBP2-205ENST00000428425 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms