RNA–Protein interactions for RNA: ENST00000427025.6

NHSL1-204, Transcript of NHS like 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NHSL1, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHSL1-204ENST00000427025 COL6A5A8TX70 2615 aa7.35□□□□□ -1.23
NHSL1-204ENST00000427025 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
NHSL1-204ENST00000427025 COL12A1Q99715 3063 aa7.35□□□□□ -1.23
NHSL1-204ENST00000427025 A0A1B0GVY2 172 aa7.32□□□□□ -1.24
NHSL1-204ENST00000427025 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
NHSL1-204ENST00000427025 DMXL1Q9Y485 3027 aa7.32□□□□□ -1.24
NHSL1-204ENST00000427025 EYSQ5T1H1 3165 aa7.3□□□□□ -1.24
NHSL1-204ENST00000427025 HELZ2Q9BYK8 2649 aaKnown RBP7.29□□□□□ -1.24
NHSL1-204ENST00000427025 ATMQ13315 3056 aa7.28□□□□□ -1.24
NHSL1-204ENST00000427025 KRTAP11-1Q8IUC1 163 aa7.25□□□□□ -1.25
NHSL1-204ENST00000427025 BAHCC1Q9P281 2608 aa7.22□□□□□ -1.25
NHSL1-204ENST00000427025 STAB2Q8WWQ8 2551 aa7.21□□□□□ -1.26
NHSL1-204ENST00000427025 SETXQ7Z333 2677 aaKnown RBP7.21□□□□□ -1.26
NHSL1-204ENST00000427025 ASPMQ8IZT6 3477 aa7.19□□□□□ -1.26
NHSL1-204ENST00000427025 UBR5O95071 2799 aaPredicted RBP7.18□□□□□ -1.26
NHSL1-204ENST00000427025 CSMD1Q96PZ7 3565 aa7.18□□□□□ -1.26
NHSL1-204ENST00000427025 LOC400499M0QZD8 3231 aa7.17□□□□□ -1.26
NHSL1-204ENST00000427025 KRTAP7-1Q8IUC3 87 aa7.16□□□□□ -1.26
NHSL1-204ENST00000427025 TEP1Q99973 2627 aaKnown RBP7.16□□□□□ -1.26
NHSL1-204ENST00000427025 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
NHSL1-204ENST00000427025 UTP20O75691 2785 aaKnown RBP7.12□□□□□ -1.27
NHSL1-204ENST00000427025 ZNF292O60281 2723 aa7.12□□□□□ -1.27
NHSL1-204ENST00000427025 TNRC18O15417 2968 aaPredicted RBP7.1□□□□□ -1.27
NHSL1-204ENST00000427025 LAMA5O15230 3695 aa7.1□□□□□ -1.27
NHSL1-204ENST00000427025 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
NHSL1-204ENST00000427025 ITPR2Q14571 2701 aa7.09□□□□□ -1.27
NHSL1-204ENST00000427025 ZFHX4Q86UP3 3567 aa7.09□□□□□ -1.28
NHSL1-204ENST00000427025 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.28
NHSL1-204ENST00000427025 HIVEP1P15822 2718 aa7.08□□□□□ -1.28
NHSL1-204ENST00000427025 NSD1Q96L73 2696 aaPredicted RBP7.05□□□□□ -1.28
NHSL1-204ENST00000427025 CELSR2Q9HCU4 2923 aa7.02□□□□□ -1.29
NHSL1-204ENST00000427025 RPS29P62273 56 aaKnown RBP7.01□□□□□ -1.29
NHSL1-204ENST00000427025 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
NHSL1-204ENST00000427025 RELNP78509 3460 aa6.93□□□□□ -1.3
NHSL1-204ENST00000427025 KMT2BQ9UMN6 2715 aaPredicted RBP6.92□□□□□ -1.3
NHSL1-204ENST00000427025 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
NHSL1-204ENST00000427025 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
NHSL1-204ENST00000427025 IGSF10Q6WRI0 2623 aa6.88□□□□□ -1.31
NHSL1-204ENST00000427025 FBN2P35556 2912 aa6.88□□□□□ -1.31
NHSL1-204ENST00000427025 DMDP11532 3685 aa6.88□□□□□ -1.31
NHSL1-204ENST00000427025 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
NHSL1-204ENST00000427025 H0YAA0 97 aa6.88□□□□□ -1.31
NHSL1-204ENST00000427025 DCHS2Q6V1P9 2916 aa6.83□□□□□ -1.32
NHSL1-204ENST00000427025 PP632Q6XCG6 107 aa6.81□□□□□ -1.32
NHSL1-204ENST00000427025 ZANQ9Y493 2812 aa6.8□□□□□ -1.32
NHSL1-204ENST00000427025 CELSR1Q9NYQ6 3014 aa6.8□□□□□ -1.32
NHSL1-204ENST00000427025 CUBNO60494 3623 aa6.79□□□□□ -1.32
NHSL1-204ENST00000427025 HRNRQ86YZ3 2850 aaPredicted RBP6.79□□□□□ -1.32
NHSL1-204ENST00000427025 SVEP1Q4LDE5 3571 aa6.78□□□□□ -1.32
NHSL1-204ENST00000427025 FLNCQ14315 2725 aa6.77□□□□□ -1.33
NHSL1-204ENST00000427025 XP32Q5T750 250 aa6.75□□□□□ -1.33
NHSL1-204ENST00000427025 SPENQ96T58 3664 aaKnown RBP6.74□□□□□ -1.33
NHSL1-204ENST00000427025 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
NHSL1-204ENST00000427025 NF1P21359 2839 aa6.68□□□□□ -1.34
NHSL1-204ENST00000427025 TGP01266 2768 aa6.66□□□□□ -1.34
NHSL1-204ENST00000427025 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
NHSL1-204ENST00000427025 NIPBLQ6KC79 2804 aaeCLIP6.62□□□□□ -1.35
NHSL1-204ENST00000427025 NBPF19A0A087WUL8 3843 aa6.62□□□□□ -1.35
NHSL1-204ENST00000427025 MXRA5Q9NR99 2828 aa6.58□□□□□ -1.36
NHSL1-204ENST00000427025 PDZD2O15018 2839 aa6.55□□□□□ -1.36
NHSL1-204ENST00000427025 KRTAP1-4P0C5Y4 121 aa6.51□□□□□ -1.37
NHSL1-204ENST00000427025 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
NHSL1-204ENST00000427025 TENM1Q9UKZ4 2725 aa6.49□□□□□ -1.37
NHSL1-204ENST00000427025 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
NHSL1-204ENST00000427025 MUC3AQ02505 3323 aa6.44□□□□□ -1.38
NHSL1-204ENST00000427025 ZFHX3Q15911 3703 aa6.4□□□□□ -1.38
NHSL1-204ENST00000427025 KRTAP13-3Q3SY46 172 aa6.39□□□□□ -1.39
NHSL1-204ENST00000427025 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
NHSL1-204ENST00000427025 CSMD2Q7Z408 3487 aa6.35□□□□□ -1.39
NHSL1-204ENST00000427025 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
NHSL1-204ENST00000427025 TENM4Q6N022 2769 aa6.31□□□□□ -1.4
NHSL1-204ENST00000427025 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
NHSL1-204ENST00000427025 VWFP04275 2813 aa6.3□□□□□ -1.4
NHSL1-204ENST00000427025 TENM3Q9P273 2699 aa6.29□□□□□ -1.4
NHSL1-204ENST00000427025 PKD1L1Q8TDX9 2849 aa6.26□□□□□ -1.41
NHSL1-204ENST00000427025 KRTAP12-1P59990 96 aa6.22□□□□□ -1.41
NHSL1-204ENST00000427025 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
NHSL1-204ENST00000427025 TENM2Q9NT68 2774 aa6.15□□□□□ -1.42
NHSL1-204ENST00000427025 CSMD3Q7Z407 3707 aa6.14□□□□□ -1.43
NHSL1-204ENST00000427025 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
NHSL1-204ENST00000427025 KRTAP13-4Q3LI77 160 aa6.13□□□□□ -1.43
NHSL1-204ENST00000427025 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
NHSL1-204ENST00000427025 MEGF8Q7Z7M0 2845 aa6.08□□□□□ -1.44
NHSL1-204ENST00000427025 FBN1P35555 2871 aaKnown RBP6.08□□□□□ -1.44
NHSL1-204ENST00000427025 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
NHSL1-204ENST00000427025 FBN3Q75N90 2809 aa6.05□□□□□ -1.44
NHSL1-204ENST00000427025 OTOGQ6ZRI0 2925 aa6.03□□□□□ -1.44
NHSL1-204ENST00000427025 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
NHSL1-204ENST00000427025 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
NHSL1-204ENST00000427025 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
NHSL1-204ENST00000427025 AKAP9Q99996 3911 aa5.86□□□□□ -1.47
NHSL1-204ENST00000427025 ANK3Q12955 4377 aaKnown RBP5.84□□□□□ -1.47
NHSL1-204ENST00000427025 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
NHSL1-204ENST00000427025 INE1O15225 51 aa5.75□□□□□ -1.49
NHSL1-204ENST00000427025 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
NHSL1-204ENST00000427025 KRTAP3-3Q9BYR6 98 aa5.73□□□□□ -1.49
NHSL1-204ENST00000427025 ZNF469Q96JG9 3925 aaPredicted RBP5.72□□□□□ -1.49
NHSL1-204ENST00000427025 KRTAP8-1Q8IUC2 63 aa5.69□□□□□ -1.5
NHSL1-204ENST00000427025 HUWE1Q7Z6Z7 4374 aaKnown RBP5.65□□□□□ -1.5
NHSL1-204ENST00000427025 ALMS1Q8TCU4 4167 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms