RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 RIF1Q5UIP0 2472 aaKnown RBP1.15□□□□□ -2.23
HDAC2-202ENST00000425835 FREM2Q5SZK8 3169 aa1.15□□□□□ -2.23
HDAC2-202ENST00000425835 SMG1Q96Q15 3661 aaKnown RBP1.15□□□□□ -2.23
HDAC2-202ENST00000425835 GVINP1Q7Z2Y8 2422 aa1.15□□□□□ -2.23
HDAC2-202ENST00000425835 LAMA1P25391 3075 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 CNOT1A5YKK6 2376 aaKnown RBP1.14□□□□□ -2.23
HDAC2-202ENST00000425835 CELSR3Q9NYQ7 3312 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 ZNF292O60281 2723 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 ANKRD17O75179 2603 aaKnown RBP1.14□□□□□ -2.23
HDAC2-202ENST00000425835 PTPRZ1P23471 2315 aaPredicted RBP1.14□□□□□ -2.23
HDAC2-202ENST00000425835 INE1O15225 51 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 Q6ZRN7 208 aaPredicted RBP1.14□□□□□ -2.23
HDAC2-202ENST00000425835 UBE2DNLQ8IWF7 75 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 KRTAP4-1Q9BYQ7 146 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 S4R3F8 94 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 MUC3AQ02505 3323 aa1.14□□□□□ -2.23
HDAC2-202ENST00000425835 SPTBN4Q9H254 2564 aa1.13□□□□□ -2.23
HDAC2-202ENST00000425835 NCOR2Q9Y618 2525 aa1.13□□□□□ -2.23
HDAC2-202ENST00000425835 SPACA4Q8TDM5 124 aa1.13□□□□□ -2.23
HDAC2-202ENST00000425835 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
HDAC2-202ENST00000425835 APLNQ9ULZ1 77 aa1.13□□□□□ -2.23
HDAC2-202ENST00000425835 IGF2RP11717 2491 aa1.13□□□□□ -2.23
HDAC2-202ENST00000425835 APC2O95996 2303 aa1.12□□□□□ -2.23
HDAC2-202ENST00000425835 NBPF19A0A087WUL8 3843 aa1.12□□□□□ -2.23
HDAC2-202ENST00000425835 DSPP15924 2871 aaKnown RBP1.12□□□□□ -2.23
HDAC2-202ENST00000425835 DMXL1Q9Y485 3027 aa1.12□□□□□ -2.23
HDAC2-202ENST00000425835 CEP295Q9C0D2 2601 aa1.12□□□□□ -2.23
HDAC2-202ENST00000425835 TPRP12270 2363 aaKnown RBP1.12□□□□□ -2.23
HDAC2-202ENST00000425835 BOD1L1Q8NFC6 3051 aa1.12□□□□□ -2.23
HDAC2-202ENST00000425835 ABCA2Q9BZC7 2435 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 CHD8Q9HCK8 2581 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 DMXL2Q8TDJ6 3036 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 CSMD1Q96PZ7 3565 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 TENM2Q9NT68 2774 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 PIEZO1Q92508 2521 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 A0A0D9SG42 100 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 RPS29P62273 56 aaKnown RBP1.11□□□□□ -2.23
HDAC2-202ENST00000425835 ROS1P08922 2347 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 RP1L1Q8IWN7 2480 aaPredicted RBP1.11□□□□□ -2.23
HDAC2-202ENST00000425835 TACC2O95359 2948 aa1.11□□□□□ -2.23
HDAC2-202ENST00000425835 HRNRQ86YZ3 2850 aaPredicted RBP1.1□□□□□ -2.23
HDAC2-202ENST00000425835 CREBBPQ92793 2442 aa1.1□□□□□ -2.23
HDAC2-202ENST00000425835 ANKRD11Q6UB99 2663 aaPredicted RBP1.1□□□□□ -2.23
HDAC2-202ENST00000425835 CELSR1Q9NYQ6 3014 aa1.1□□□□□ -2.23
HDAC2-202ENST00000425835 M0QZ58 72 aa1.1□□□□□ -2.23
HDAC2-202ENST00000425835 CELSR2Q9HCU4 2923 aa1.1□□□□□ -2.23
HDAC2-202ENST00000425835 ZFYVE26Q68DK2 2539 aa1.1□□□□□ -2.23
HDAC2-202ENST00000425835 C2CD3Q4AC94 2353 aa1.1□□□□□ -2.23
HDAC2-202ENST00000425835 ASPMQ8IZT6 3477 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 COL6A6A6NMZ7 2263 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 USP24Q9UPU5 2620 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 SETXQ7Z333 2677 aaKnown RBP1.09□□□□□ -2.23
HDAC2-202ENST00000425835 AKAP6Q13023 2319 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 ACACAQ13085 2346 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 DNAH1Q9P2D7 4330 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 OTOGQ6ZRI0 2925 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 RELNP78509 3460 aa1.09□□□□□ -2.23
HDAC2-202ENST00000425835 UTP20O75691 2785 aaKnown RBP1.09□□□□□ -2.24
HDAC2-202ENST00000425835 ITPR1Q14643 2758 aa1.09□□□□□ -2.24
HDAC2-202ENST00000425835 ASH1LQ9NR48 2969 aaKnown RBP1.09□□□□□ -2.24
HDAC2-202ENST00000425835 PKD1L2Q7Z442 2459 aa1.09□□□□□ -2.24
HDAC2-202ENST00000425835 PRRC2CQ9Y520 2896 aaKnown RBP1.09□□□□□ -2.24
HDAC2-202ENST00000425835 CACNA1AO00555 2505 aa1.09□□□□□ -2.24
HDAC2-202ENST00000425835 NBASA2RRP1 2371 aa1.08□□□□□ -2.24
HDAC2-202ENST00000425835 SVEP1Q4LDE5 3571 aa1.08□□□□□ -2.24
HDAC2-202ENST00000425835 TLN1Q9Y490 2541 aaKnown RBP1.08□□□□□ -2.24
HDAC2-202ENST00000425835 PCNX1Q96RV3 2341 aa1.08□□□□□ -2.24
HDAC2-202ENST00000425835 IGSF10Q6WRI0 2623 aa1.08□□□□□ -2.24
HDAC2-202ENST00000425835 ACACBO00763 2458 aa1.08□□□□□ -2.24
HDAC2-202ENST00000425835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.07□□□□□ -2.242e-10■■■■■ 29.2
HDAC2-202ENST00000425835 ADGRG4Q8IZF6 3080 aa1.07□□□□□ -2.24
HDAC2-202ENST00000425835 SPTA1P02549 2419 aa1.07□□□□□ -2.24
HDAC2-202ENST00000425835 LAMA5O15230 3695 aa1.07□□□□□ -2.24
HDAC2-202ENST00000425835 CFAP46Q8IYW2 2715 aa1.07□□□□□ -2.24
HDAC2-202ENST00000425835 LOC400499M0QZD8 3231 aa1.07□□□□□ -2.24
HDAC2-202ENST00000425835 EPG5Q9HCE0 2579 aa1.07□□□□□ -2.24
HDAC2-202ENST00000425835 DCHS2Q6V1P9 2916 aa1.07□□□□□ -2.24
HDAC2-202ENST00000425835 ATMQ13315 3056 aa1.06□□□□□ -2.24
HDAC2-202ENST00000425835 NF1P21359 2839 aa1.06□□□□□ -2.24
HDAC2-202ENST00000425835 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
HDAC2-202ENST00000425835 LRBAP50851 2863 aa1.06□□□□□ -2.24
HDAC2-202ENST00000425835 COL12A1Q99715 3063 aa1.06□□□□□ -2.24
HDAC2-202ENST00000425835 SPTAN1Q13813 2472 aaKnown RBP1.06□□□□□ -2.24
HDAC2-202ENST00000425835 BSNQ9UPA5 3926 aa1.05□□□□□ -2.24
HDAC2-202ENST00000425835 NIPBLQ6KC79 2804 aaeCLIP1.05□□□□□ -2.24
HDAC2-202ENST00000425835 HIVEP3Q5T1R4 2406 aa1.05□□□□□ -2.24
HDAC2-202ENST00000425835 CRYBG3Q68DQ2 2970 aa1.05□□□□□ -2.24
HDAC2-202ENST00000425835 USP9XQ93008 2570 aaPredicted RBP1.05□□□□□ -2.24
HDAC2-202ENST00000425835 FLNCQ14315 2725 aa1.05□□□□□ -2.24
HDAC2-202ENST00000425835 FAM208BQ5VWN6 2430 aa1.05□□□□□ -2.24
HDAC2-202ENST00000425835 POLQO75417 2590 aa1.04□□□□□ -2.24
HDAC2-202ENST00000425835 VPS13CQ709C8 3753 aa1.04□□□□□ -2.24
HDAC2-202ENST00000425835 TENM4Q6N022 2769 aa1.04□□□□□ -2.24
HDAC2-202ENST00000425835 Q5VSD8 79 aa1.04□□□□□ -2.24
HDAC2-202ENST00000425835 GCN1Q92616 2671 aaKnown RBP1.04□□□□□ -2.24
HDAC2-202ENST00000425835 VPS13DQ5THJ4 4388 aa1.04□□□□□ -2.24
HDAC2-202ENST00000425835 TLN2Q9Y4G6 2542 aa1.04□□□□□ -2.24
HDAC2-202ENST00000425835 TEX15Q9BXT5 2789 aa1.03□□□□□ -2.24
HDAC2-202ENST00000425835 FBN2P35556 2912 aa1.03□□□□□ -2.24
HDAC2-202ENST00000425835 SMR3AQ99954 134 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms