RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 A0A1B0GVX0 72 aa13.19□□□□□ -0.3
APOE-202ENST00000425718 A8MWP4 228 aa13.19□□□□□ -0.3
APOE-202ENST00000425718 LINC00846Q9NV44 126 aa13.19□□□□□ -0.3
APOE-202ENST00000425718 BPY2O14599 106 aa13.18□□□□□ -0.3
APOE-202ENST00000425718 LINC00313P59037 77 aa13.18□□□□□ -0.3
APOE-202ENST00000425718 IGHV6-1A0A0B4J1U7 121 aa13.15□□□□□ -0.3
APOE-202ENST00000425718 J3QR89 54 aa13.14□□□□□ -0.31
APOE-202ENST00000425718 SEC61BP60468 96 aaKnown RBP13.13□□□□□ -0.31
APOE-202ENST00000425718 DSCR10P59022 87 aa13.09□□□□□ -0.31
APOE-202ENST00000425718 PRR15Q8IV56 129 aa13.09□□□□□ -0.31
APOE-202ENST00000425718 IGKV3D-7A0A0C4DH55 119 aa13.07□□□□□ -0.32
APOE-202ENST00000425718 Q75L30 129 aa13.06□□□□□ -0.32
APOE-202ENST00000425718 RPL37P61927 97 aaKnown RBP13.05□□□□□ -0.32
APOE-202ENST00000425718 CXCL6P80162 114 aa13.03□□□□□ -0.32
APOE-202ENST00000425718 C20orf166-AS1Q96NR2 134 aa13.02□□□□□ -0.33
APOE-202ENST00000425718 C8orf17Q9NRJ1 99 aa13.02□□□□□ -0.33
APOE-202ENST00000425718 K7EQZ3 153 aa12.99□□□□□ -0.33
APOE-202ENST00000425718 A8MUU9 505 aa12.98□□□□□ -0.33
APOE-202ENST00000425718 ATP5EP2Q5VTU8 51 aa12.98□□□□□ -0.33
APOE-202ENST00000425718 NOTCH2NLQ7Z3S9 236 aa12.97□□□□□ -0.33
APOE-202ENST00000425718 KRTAP16-1A8MUX0 517 aa12.96□□□□□ -0.33
APOE-202ENST00000425718 ATP11AUNQ6ZP68 121 aa12.96□□□□□ -0.33
APOE-202ENST00000425718 MUC17Q685J3 4493 aa12.95□□□□□ -0.34
APOE-202ENST00000425718 TMEM254Q8TBM7 123 aa12.92□□□□□ -0.34
APOE-202ENST00000425718 UBR4Q5T4S7 5183 aa12.91□□□□□ -0.34
APOE-202ENST00000425718 MMP24-AS1A0A0U1RRL7 71 aa12.91□□□□□ -0.34
APOE-202ENST00000425718 hDV103S1A0JD37 113 aa12.9□□□□□ -0.34
APOE-202ENST00000425718 LINC00643Q86TS7 51 aa12.9□□□□□ -0.34
APOE-202ENST00000425718 K7ERU9 68 aa12.89□□□□□ -0.35
APOE-202ENST00000425718 PCOTHQ58A44 107 aa12.89□□□□□ -0.35
APOE-202ENST00000425718 Q8N9L7 120 aa12.87□□□□□ -0.35
APOE-202ENST00000425718 Q8N9P0 234 aaPredicted RBP12.87□□□□□ -0.35
APOE-202ENST00000425718 MRPL34Q9BQ48 92 aaKnown RBP12.87□□□□□ -0.35
APOE-202ENST00000425718 CASC2Q6XLA1 102 aa12.83□□□□□ -0.36
APOE-202ENST00000425718 HCG22E2RYF7 251 aa12.82□□□□□ -0.36
APOE-202ENST00000425718 WFDC13Q8IUB5 93 aa12.78□□□□□ -0.36
APOE-202ENST00000425718 NDUFS5O43920 106 aa12.74□□□□□ -0.37
APOE-202ENST00000425718 A0A0U1RQV1 116 aa12.73□□□□□ -0.37
APOE-202ENST00000425718 ZCCHC13Q8WW36 166 aaKnown RBP12.73□□□□□ -0.37
APOE-202ENST00000425718 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
APOE-202ENST00000425718 RNF213Q63HN8 5207 aa12.72□□□□□ -0.37
APOE-202ENST00000425718 KRTAP4-1Q9BYQ7 146 aa12.62□□□□□ -0.39
APOE-202ENST00000425718 TP53AIP1Q9HCN2 124 aa12.62□□□□□ -0.39
APOE-202ENST00000425718 IMUPQ9GZP8 106 aa12.56□□□□□ -0.4
APOE-202ENST00000425718 MUC2Q02817 5179 aa12.56□□□□□ -0.4
APOE-202ENST00000425718 A0A087WVE0 104 aa12.5□□□□□ -0.41
APOE-202ENST00000425718 SPINK7P58062 85 aa12.45□□□□□ -0.42
APOE-202ENST00000425718 Q5W150 140 aa12.43□□□□□ -0.42
APOE-202ENST00000425718 MT-ATP8P03928 68 aa12.42□□□□□ -0.42
APOE-202ENST00000425718 UQCRQO14949 82 aa12.41□□□□□ -0.42
APOE-202ENST00000425718 C7orf65Q6ZTY9 151 aa12.41□□□□□ -0.42
APOE-202ENST00000425718 RBM12B-AS1Q9P1G2 102 aa12.39□□□□□ -0.43
APOE-202ENST00000425718 SCGB1A1P11684 91 aa12.37□□□□□ -0.43
APOE-202ENST00000425718 COX6B2Q6YFQ2 88 aa12.37□□□□□ -0.43
APOE-202ENST00000425718 TRAV22A0A0B4J277 110 aa12.36□□□□□ -0.43
APOE-202ENST00000425718 IGKV2D-30A0A075B6S6 120 aa12.34□□□□□ -0.43
APOE-202ENST00000425718 IGKV2-30P06310 120 aa12.34□□□□□ -0.43
APOE-202ENST00000425718 ATOX1O00244 68 aa12.33□□□□□ -0.44
APOE-202ENST00000425718 HRES1P13985 223 aa12.33□□□□□ -0.44
APOE-202ENST00000425718 FAM236DA0A1B0GTK5 79 aa12.27□□□□□ -0.45
APOE-202ENST00000425718 FAM236CP0DP71 79 aa12.27□□□□□ -0.45
APOE-202ENST00000425718 MPLKIPQ8TAP9 179 aa12.27□□□□□ -0.45
APOE-202ENST00000425718 OCR1Q9BZK8 76 aa12.27□□□□□ -0.45
APOE-202ENST00000425718 FAT4Q6V0I7 4981 aa12.27□□□□□ -0.45
APOE-202ENST00000425718 KRTAP19-2Q3LHN2 52 aa12.26□□□□□ -0.45
APOE-202ENST00000425718 SMIM20Q8N5G0 67 aa12.26□□□□□ -0.45
APOE-202ENST00000425718 LOC101927531A0A1B0GV80 90 aa12.25□□□□□ -0.45
APOE-202ENST00000425718 H0Y9P7 68 aa12.24□□□□□ -0.45
APOE-202ENST00000425718 FAM236AA0A1B0GUQ0 79 aa12.23□□□□□ -0.45
APOE-202ENST00000425718 FAM236BA0A1B0GV22 79 aa12.23□□□□□ -0.45
APOE-202ENST00000425718 MP68P56378 58 aa12.23□□□□□ -0.45
APOE-202ENST00000425718 C5orf47Q569G3 176 aa12.22□□□□□ -0.45
APOE-202ENST00000425718 LCE2CQ5TA81 110 aa12.19□□□□□ -0.46
APOE-202ENST00000425718 H3BPC8 53 aa12.17□□□□□ -0.46
APOE-202ENST00000425718 CYP4F30PQ9H0H9 118 aa12.14□□□□□ -0.47
APOE-202ENST00000425718 FLGP20930 4061 aaPredicted RBP12.12□□□□□ -0.47
APOE-202ENST00000425718 C1orf64Q8NEQ6 169 aa12.12□□□□□ -0.47
APOE-202ENST00000425718 TRAV7A0A075B6U4 112 aa12.11□□□□□ -0.47
APOE-202ENST00000425718 LCE2AQ5TA79 106 aaPredicted RBP12.1□□□□□ -0.47
APOE-202ENST00000425718 LINC00208Q96KT6 92 aa12.09□□□□□ -0.47
APOE-202ENST00000425718 MT1HP80294 61 aa12.05□□□□□ -0.48
APOE-202ENST00000425718 C4orf26Q17RF5 130 aa12.03□□□□□ -0.48
APOE-202ENST00000425718 M0R2T5 61 aa12□□□□□ -0.49
APOE-202ENST00000425718 H1FX-AS1Q4G0G2 97 aa11.99□□□□□ -0.49
APOE-202ENST00000425718 SERP2Q8N6R1 65 aa11.94□□□□□ -0.5
APOE-202ENST00000425718 KLKP1Q107X0 134 aa11.85□□□□□ -0.51
APOE-202ENST00000425718 A8MUN3 132 aa11.84□□□□□ -0.51
APOE-202ENST00000425718 KRTAP3-1Q9BYR8 98 aa11.79□□□□□ -0.52
APOE-202ENST00000425718 KRTAP10-6P60371 365 aaPredicted RBP11.75□□□□□ -0.53
APOE-202ENST00000425718 COX7CP15954 63 aa11.74□□□□□ -0.53
APOE-202ENST00000425718 C20orf197Q8N268 126 aa11.74□□□□□ -0.53
APOE-202ENST00000425718 S4R3F8 94 aa11.74□□□□□ -0.53
APOE-202ENST00000425718 SNURFQ9Y675 71 aa11.7□□□□□ -0.54
APOE-202ENST00000425718 LORP23490 312 aaPredicted RBP11.69□□□□□ -0.54
APOE-202ENST00000425718 ANAPC13Q9BS18 74 aa11.68□□□□□ -0.54
APOE-202ENST00000425718 DMAC1Q96GE9 116 aa11.63□□□□□ -0.55
APOE-202ENST00000425718 CSAG1Q6PB30 78 aa11.6□□□□□ -0.55
APOE-202ENST00000425718 NDUFC1O43677 76 aa11.59□□□□□ -0.55
APOE-202ENST00000425718 LCA10Q71F78 164 aa11.59□□□□□ -0.55
APOE-202ENST00000425718 SPANXA2-OT1Q8N9U9 137 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms