RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SRRM2Q9UQ35 2752 aaKnown RBP1.11□□□□□ -2.23
PMS1-209ENST00000424059 CFAP47Q6ZTR5 3102 aa1.11□□□□□ -2.23
PMS1-209ENST00000424059 BOD1L1Q8NFC6 3051 aa1.11□□□□□ -2.23
PMS1-209ENST00000424059 FRYLO94915 3013 aa1.11□□□□□ -2.23
PMS1-209ENST00000424059 MKI67P46013 3256 aaKnown RBP1.1□□□□□ -2.23
PMS1-209ENST00000424059 EP300Q09472 2414 aaPredicted RBP1.1□□□□□ -2.23
PMS1-209ENST00000424059 GOLGB1Q14789 3259 aaKnown RBP1.1□□□□□ -2.23
PMS1-209ENST00000424059 C2CD3Q4AC94 2353 aa1.1□□□□□ -2.23
PMS1-209ENST00000424059 COL6A5A8TX70 2615 aa1.09□□□□□ -2.23
PMS1-209ENST00000424059 KIAA1109Q2LD37 5005 aa1.09□□□□□ -2.23
PMS1-209ENST00000424059 FSIP2Q5CZC0 6907 aa1.09□□□□□ -2.23
PMS1-209ENST00000424059 SZT2Q5T011 3432 aa1.09□□□□□ -2.23
PMS1-209ENST00000424059 WDFY4Q6ZS81 3184 aa1.09□□□□□ -2.23
PMS1-209ENST00000424059 VPS13AQ96RL7 3174 aa1.09□□□□□ -2.23
PMS1-209ENST00000424059 DEFB124Q8NES8 71 aa1.09□□□□□ -2.24
PMS1-209ENST00000424059 RELNP78509 3460 aa1.09□□□□□ -2.24
PMS1-209ENST00000424059 GVINP1Q7Z2Y8 2422 aa1.08□□□□□ -2.24
PMS1-209ENST00000424059 SPTBN5Q9NRC6 3674 aaKnown RBP1.08□□□□□ -2.24
PMS1-209ENST00000424059 TRIOO75962 3097 aa1.08□□□□□ -2.24
PMS1-209ENST00000424059 DNAH8Q96JB1 4490 aa1.08□□□□□ -2.24
PMS1-209ENST00000424059 DMXL1Q9Y485 3027 aa1.08□□□□□ -2.24
PMS1-209ENST00000424059 KRTAP20-1Q3LI63 56 aa1.08□□□□□ -2.24
PMS1-209ENST00000424059 ABCA2Q9BZC7 2435 aa1.07□□□□□ -2.24
PMS1-209ENST00000424059 AKAP13Q12802 2813 aa1.07□□□□□ -2.24
PMS1-209ENST00000424059 CENPFP49454 3210 aa1.07□□□□□ -2.24
PMS1-209ENST00000424059 HTTP42858 3142 aa1.07□□□□□ -2.24
PMS1-209ENST00000424059 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
PMS1-209ENST00000424059 UTRNP46939 3433 aa1.07□□□□□ -2.24
PMS1-209ENST00000424059 DMDP11532 3685 aa1.07□□□□□ -2.24
PMS1-209ENST00000424059 LINC01556Q5JQF7 62 aa1.06□□□□□ -2.24
PMS1-209ENST00000424059 TTC28Q96AY4 2481 aa1.06□□□□□ -2.24
PMS1-209ENST00000424059 CACNA1HO95180 2353 aa1.06□□□□□ -2.24
PMS1-209ENST00000424059 H3BNG1 76 aa1.06□□□□□ -2.24
PMS1-209ENST00000424059 F8P00451 2351 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 CCDC168Q8NDH2 2452 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 SPEGQ15772 3267 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 APC2O95996 2303 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 KRTAP12-4P60329 112 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 BSNQ9UPA5 3926 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 ITPR1Q14643 2758 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 NCOR1O75376 2440 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 FRYQ5TBA9 3013 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 CHD9Q3L8U1 2897 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 U3KQA8 63 aa1.05□□□□□ -2.24
PMS1-209ENST00000424059 COL12A1Q99715 3063 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 PCNTO95613 3336 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 MEGF8Q7Z7M0 2845 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 ATMQ13315 3056 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 FRAS1Q86XX4 4008 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 DNAH12Q6ZR08 3092 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 LRBAP50851 2863 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 DCHS2Q6V1P9 2916 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 SACSQ9NZJ4 4579 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 CEP250Q9BV73 2442 aa1.04□□□□□ -2.24
PMS1-209ENST00000424059 DMBT1Q9UGM3 2413 aaPredicted RBP1.04□□□□□ -2.24
PMS1-209ENST00000424059 DCHS1Q96JQ0 3298 aa1.03□□□□□ -2.25
PMS1-209ENST00000424059 CELSR3Q9NYQ7 3312 aa1.03□□□□□ -2.25
PMS1-209ENST00000424059 NF1P21359 2839 aa1.02□□□□□ -2.25
PMS1-209ENST00000424059 MAP1AP78559 2803 aaPredicted RBP1.02□□□□□ -2.25
PMS1-209ENST00000424059 KALRNO60229 2985 aa1.02□□□□□ -2.25
PMS1-209ENST00000424059 CEP290O15078 2479 aa1.02□□□□□ -2.25
PMS1-209ENST00000424059 NAV2Q8IVL1 2488 aa1.02□□□□□ -2.25
PMS1-209ENST00000424059 SPENQ96T58 3664 aaKnown RBP1.02□□□□□ -2.25
PMS1-209ENST00000424059 PDZD2O15018 2839 aa1.01□□□□□ -2.25
PMS1-209ENST00000424059 ABCA12Q86UK0 2595 aa1.01□□□□□ -2.25
PMS1-209ENST00000424059 HELZ2Q9BYK8 2649 aaKnown RBP1.01□□□□□ -2.25
PMS1-209ENST00000424059 SPART-AS1P0CW21 52 aa1.01□□□□□ -2.25
PMS1-209ENST00000424059 MAP1BP46821 2468 aaKnown RBP1.01□□□□□ -2.25
PMS1-209ENST00000424059 LYSTQ99698 3801 aa1.01□□□□□ -2.25
PMS1-209ENST00000424059 LAMA5O15230 3695 aa1□□□□□ -2.25
PMS1-209ENST00000424059 ZNF292O60281 2723 aa1□□□□□ -2.25
PMS1-209ENST00000424059 STAB1Q9NY15 2570 aa1□□□□□ -2.25
PMS1-209ENST00000424059 COL7A1Q02388 2944 aa1□□□□□ -2.25
PMS1-209ENST00000424059 KMT2AQ03164 3969 aa1□□□□□ -2.25
PMS1-209ENST00000424059 TNP1P09430 55 aa0.99□□□□□ -2.25
PMS1-209ENST00000424059 MUC2Q02817 5179 aa0.99□□□□□ -2.25
PMS1-209ENST00000424059 SETD2Q9BYW2 2564 aaPredicted RBP0.99□□□□□ -2.25
PMS1-209ENST00000424059 USP34Q70CQ2 3546 aa0.99□□□□□ -2.25
PMS1-209ENST00000424059 SMG1Q96Q15 3661 aaKnown RBP0.99□□□□□ -2.25
PMS1-209ENST00000424059 CSMD3Q7Z407 3707 aa0.99□□□□□ -2.25
PMS1-209ENST00000424059 DYNC2H1Q8NCM8 4307 aaKnown RBP0.98□□□□□ -2.25
PMS1-209ENST00000424059 HIVEP3Q5T1R4 2406 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 ANKHD1Q8IWZ3 2542 aaKnown RBP0.98□□□□□ -2.25
PMS1-209ENST00000424059 HTN3P15516 51 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 DMXL2Q8TDJ6 3036 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 DNAH3Q8TD57 4116 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 NBASA2RRP1 2371 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 LAMA2P24043 3122 aaKnown RBP0.98□□□□□ -2.25
PMS1-209ENST00000424059 FREM2Q5SZK8 3169 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 KRTAP2-3P0C7H8 128 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 KRTAP12-3P60328 96 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 KRTAP2-4Q9BYR9 128 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 KRTAP2-1Q9BYU5 128 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 DNAH10Q8IVF4 4471 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 ITPR3Q14573 2671 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 VPS13BQ7Z7G8 4022 aa0.98□□□□□ -2.25
PMS1-209ENST00000424059 DNAH2Q9P225 4427 aa0.97□□□□□ -2.25
PMS1-209ENST00000424059 CREBBPQ92793 2442 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms