RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 KRTAP9-8Q9BYQ0 159 aa12.83□□□□□ -0.36
SMDT1-202ENST00000422252 HRES1P13985 223 aa12.81□□□□□ -0.36
SMDT1-202ENST00000422252 J3KT08 172 aa12.8□□□□□ -0.36
SMDT1-202ENST00000422252 MPLKIPQ8TAP9 179 aa12.8□□□□□ -0.36
SMDT1-202ENST00000422252 RBM12B-AS1Q9P1G2 102 aa12.8□□□□□ -0.36
SMDT1-202ENST00000422252 Q6ZQT0 140 aa12.78□□□□□ -0.36
SMDT1-202ENST00000422252 M0R143 59 aa12.76□□□□□ -0.37
SMDT1-202ENST00000422252 ATXN8Q156A1 80 aa12.76□□□□□ -0.37
SMDT1-202ENST00000422252 NAA38Q9BRA0 125 aaKnown RBP12.73□□□□□ -0.37
SMDT1-202ENST00000422252 JMJD7-PLA2G4BH0Y9G9 81 aa12.72□□□□□ -0.37
SMDT1-202ENST00000422252 NDUFB1O75438 58 aa12.7□□□□□ -0.38
SMDT1-202ENST00000422252 ZCCHC13Q8WW36 166 aaKnown RBP12.7□□□□□ -0.38
SMDT1-202ENST00000422252 LOC110117498A0A087WWA1 95 aa12.68□□□□□ -0.38
SMDT1-202ENST00000422252 A0A1B0GW54 56 aa12.67□□□□□ -0.38
SMDT1-202ENST00000422252 PDE6GP18545 87 aa12.64□□□□□ -0.39
SMDT1-202ENST00000422252 Q8N9P0 234 aaPredicted RBP12.64□□□□□ -0.39
SMDT1-202ENST00000422252 MT2AP02795 61 aa12.63□□□□□ -0.39
SMDT1-202ENST00000422252 A8MWP4 228 aa12.62□□□□□ -0.39
SMDT1-202ENST00000422252 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
SMDT1-202ENST00000422252 SPINK7P58062 85 aa12.61□□□□□ -0.39
SMDT1-202ENST00000422252 C8orf17Q9NRJ1 99 aa12.61□□□□□ -0.39
SMDT1-202ENST00000422252 C14orf132Q9NPU4 83 aa12.6□□□□□ -0.39
SMDT1-202ENST00000422252 SMIM6P0DI80 62 aa12.58□□□□□ -0.4
SMDT1-202ENST00000422252 LYRM7Q5U5X0 104 aa12.58□□□□□ -0.4
SMDT1-202ENST00000422252 IGKV3D-7A0A0C4DH55 119 aa12.57□□□□□ -0.4
SMDT1-202ENST00000422252 USH2AO75445 5202 aa12.56□□□□□ -0.4
SMDT1-202ENST00000422252 MT1FP04733 61 aa12.54□□□□□ -0.4
SMDT1-202ENST00000422252 Q6ZVQ6 151 aa12.51□□□□□ -0.41
SMDT1-202ENST00000422252 NREPQ16612 68 aa12.5□□□□□ -0.41
SMDT1-202ENST00000422252 PRR15Q8IV56 129 aa12.49□□□□□ -0.41
SMDT1-202ENST00000422252 KRTAP10-10P60014 251 aa12.48□□□□□ -0.41
SMDT1-202ENST00000422252 BATFQ16520 125 aa12.48□□□□□ -0.41
SMDT1-202ENST00000422252 TSTD3H0UI37 97 aa12.47□□□□□ -0.41
SMDT1-202ENST00000422252 SSPOA2VEC9 5147 aa12.46□□□□□ -0.41
SMDT1-202ENST00000422252 WFDC13Q8IUB5 93 aa12.44□□□□□ -0.42
SMDT1-202ENST00000422252 KRTAP9-3Q9BYQ3 159 aa12.44□□□□□ -0.42
SMDT1-202ENST00000422252 MMP24-AS1A0A0U1RRL7 71 aa12.41□□□□□ -0.42
SMDT1-202ENST00000422252 LCE2BO14633 110 aa12.4□□□□□ -0.42
SMDT1-202ENST00000422252 TMEM254Q8TBM7 123 aa12.4□□□□□ -0.42
SMDT1-202ENST00000422252 MRPL34Q9BQ48 92 aaKnown RBP12.39□□□□□ -0.43
SMDT1-202ENST00000422252 H3BT86 120 aa12.38□□□□□ -0.43
SMDT1-202ENST00000422252 C9orf118A6NHY6 69 aa12.37□□□□□ -0.43
SMDT1-202ENST00000422252 K7EQZ3 153 aa12.34□□□□□ -0.43
SMDT1-202ENST00000422252 hDV103S1A0JD37 113 aa12.33□□□□□ -0.44
SMDT1-202ENST00000422252 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.33□□□□□ -0.44
SMDT1-202ENST00000422252 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
SMDT1-202ENST00000422252 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
SMDT1-202ENST00000422252 NDUFS5O43920 106 aa12.29□□□□□ -0.44
SMDT1-202ENST00000422252 BPY2O14599 106 aa12.26□□□□□ -0.45
SMDT1-202ENST00000422252 KRTAP19-1Q8IUB9 90 aa12.25□□□□□ -0.45
SMDT1-202ENST00000422252 KRTAP9-7A8MTY7 169 aa12.21□□□□□ -0.45
SMDT1-202ENST00000422252 FCGBPQ9Y6R7 5405 aaPredicted RBP12.2□□□□□ -0.46
SMDT1-202ENST00000422252 LOC105371267A0A1B0GV96 52 aa12.2□□□□□ -0.46
SMDT1-202ENST00000422252 H1FX-AS1Q4G0G2 97 aa12.18□□□□□ -0.46
SMDT1-202ENST00000422252 IGKV2D-30A0A075B6S6 120 aa12.15□□□□□ -0.46
SMDT1-202ENST00000422252 IGKV2-30P06310 120 aa12.15□□□□□ -0.46
SMDT1-202ENST00000422252 Q5W150 140 aa12.14□□□□□ -0.47
SMDT1-202ENST00000422252 SPCS1Q9Y6A9 102 aa12.14□□□□□ -0.47
SMDT1-202ENST00000422252 C7orf65Q6ZTY9 151 aa12.13□□□□□ -0.47
SMDT1-202ENST00000422252 Q8N9L7 120 aa12.13□□□□□ -0.47
SMDT1-202ENST00000422252 CASC2Q6XLA1 102 aa12.11□□□□□ -0.47
SMDT1-202ENST00000422252 SMCPP49901 116 aaPredicted RBP12.08□□□□□ -0.48
SMDT1-202ENST00000422252 HCG22E2RYF7 251 aa12.07□□□□□ -0.48
SMDT1-202ENST00000422252 LINC00846Q9NV44 126 aa12.02□□□□□ -0.49
SMDT1-202ENST00000422252 CXCL6P80162 114 aa12□□□□□ -0.49
SMDT1-202ENST00000422252 KRTAP19-6Q3LI70 58 aa12□□□□□ -0.49
SMDT1-202ENST00000422252 UBL5Q9BZL1 73 aa11.98□□□□□ -0.49
SMDT1-202ENST00000422252 PRO0461Q9UI25 63 aa11.96□□□□□ -0.49
SMDT1-202ENST00000422252 C4orf26Q17RF5 130 aa11.95□□□□□ -0.5
SMDT1-202ENST00000422252 COL5A1-AS1Q5SY13 56 aa11.95□□□□□ -0.5
SMDT1-202ENST00000422252 K7EP34 96 aa11.91□□□□□ -0.5
SMDT1-202ENST00000422252 C5orf47Q569G3 176 aa11.77□□□□□ -0.53
SMDT1-202ENST00000422252 KRTAP3-1Q9BYR8 98 aa11.77□□□□□ -0.53
SMDT1-202ENST00000422252 MACF1Q9UPN3 7388 aaKnown RBP11.76□□□□□ -0.53
SMDT1-202ENST00000422252 GTF2H5Q6ZYL4 71 aa11.73□□□□□ -0.53
SMDT1-202ENST00000422252 TP53AIP1Q9HCN2 124 aa11.73□□□□□ -0.53
SMDT1-202ENST00000422252 S4R3F8 94 aa11.73□□□□□ -0.53
SMDT1-202ENST00000422252 C1orf64Q8NEQ6 169 aa11.72□□□□□ -0.53
SMDT1-202ENST00000422252 FAM236AA0A1B0GUQ0 79 aa11.68□□□□□ -0.54
SMDT1-202ENST00000422252 FAM236BA0A1B0GV22 79 aa11.68□□□□□ -0.54
SMDT1-202ENST00000422252 F8W1H4 67 aa11.68□□□□□ -0.54
SMDT1-202ENST00000422252 ETDBQ3ZM63 59 aa11.65□□□□□ -0.54
SMDT1-202ENST00000422252 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
SMDT1-202ENST00000422252 LCA10Q71F78 164 aa11.64□□□□□ -0.55
SMDT1-202ENST00000422252 SYNE2Q8WXH0 6885 aaKnown RBP11.63□□□□□ -0.55
SMDT1-202ENST00000422252 CYP4F30PQ9H0H9 118 aa11.52□□□□□ -0.57
SMDT1-202ENST00000422252 PCP4L1A6NKN8 68 aa11.51□□□□□ -0.57
SMDT1-202ENST00000422252 KRTAP6-3Q3LI67 103 aa11.49□□□□□ -0.57
SMDT1-202ENST00000422252 SPRR2GQ9BYE4 73 aa11.49□□□□□ -0.57
SMDT1-202ENST00000422252 MT1BP07438 61 aa11.47□□□□□ -0.57
SMDT1-202ENST00000422252 Q5VV11 94 aa11.47□□□□□ -0.57
SMDT1-202ENST00000422252 TRAV22A0A0B4J277 110 aa11.46□□□□□ -0.57
SMDT1-202ENST00000422252 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
SMDT1-202ENST00000422252 KRTAP19-8Q3LI54 63 aa11.44□□□□□ -0.58
SMDT1-202ENST00000422252 LOC101927531A0A1B0GV80 90 aa11.42□□□□□ -0.58
SMDT1-202ENST00000422252 ACYP1P07311 99 aa11.42□□□□□ -0.58
SMDT1-202ENST00000422252 KLKP1Q107X0 134 aa11.42□□□□□ -0.58
SMDT1-202ENST00000422252 A6NN06 94 aa11.4□□□□□ -0.58
SMDT1-202ENST00000422252 ATP5EP2Q5VTU8 51 aa11.36□□□□□ -0.59
SMDT1-202ENST00000422252 A0A087WVE0 104 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms