RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 IGHV6-1A0A0B4J1U7 121 aa7.61□□□□□ -1.19
LINC01840-201ENST00000421870 A0A1B0GVX0 72 aa7.6□□□□□ -1.19
LINC01840-201ENST00000421870 J3KT08 172 aa7.6□□□□□ -1.19
LINC01840-201ENST00000421870 M0R2T5 61 aa7.6□□□□□ -1.19
LINC01840-201ENST00000421870 C8orf87E5RJ46 101 aa7.59□□□□□ -1.19
LINC01840-201ENST00000421870 PDE6GP18545 87 aa7.59□□□□□ -1.19
LINC01840-201ENST00000421870 LYRM7Q5U5X0 104 aa7.59□□□□□ -1.19
LINC01840-201ENST00000421870 KRTAP9-6A0A140TA67 174 aa7.57□□□□□ -1.2
LINC01840-201ENST00000421870 BATFQ16520 125 aa7.56□□□□□ -1.2
LINC01840-201ENST00000421870 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
LINC01840-201ENST00000421870 TAX1BP3O14907 124 aa7.53□□□□□ -1.2
LINC01840-201ENST00000421870 C14orf132Q9NPU4 83 aa7.53□□□□□ -1.2
LINC01840-201ENST00000421870 NDUFB1O75438 58 aa7.51□□□□□ -1.21
LINC01840-201ENST00000421870 A0A1W2PPM0 123 aa7.5□□□□□ -1.21
LINC01840-201ENST00000421870 A8MWP4 228 aa7.5□□□□□ -1.21
LINC01840-201ENST00000421870 MPLKIPQ8TAP9 179 aa7.5□□□□□ -1.21
LINC01840-201ENST00000421870 H3BT86 120 aa7.49□□□□□ -1.21
LINC01840-201ENST00000421870 Q8N9P0 234 aaPredicted RBP7.49□□□□□ -1.21
LINC01840-201ENST00000421870 HRES1P13985 223 aa7.48□□□□□ -1.21
LINC01840-201ENST00000421870 IGKV3D-7A0A0C4DH55 119 aa7.47□□□□□ -1.21
LINC01840-201ENST00000421870 NREPQ16612 68 aa7.47□□□□□ -1.21
LINC01840-201ENST00000421870 FSIP2Q5CZC0 6907 aa7.46□□□□□ -1.22
LINC01840-201ENST00000421870 ZCCHC13Q8WW36 166 aaKnown RBP7.46□□□□□ -1.22
LINC01840-201ENST00000421870 C8orf17Q9NRJ1 99 aa7.46□□□□□ -1.22
LINC01840-201ENST00000421870 PRR15Q8IV56 129 aa7.44□□□□□ -1.22
LINC01840-201ENST00000421870 CRCT1Q9UGL9 99 aa7.44□□□□□ -1.22
LINC01840-201ENST00000421870 RBM12B-AS1Q9P1G2 102 aa7.43□□□□□ -1.22
LINC01840-201ENST00000421870 MTURNQ8N3F0 131 aa7.42□□□□□ -1.22
LINC01840-201ENST00000421870 Q6ZVQ6 151 aa7.41□□□□□ -1.22
LINC01840-201ENST00000421870 KRTAP9-8Q9BYQ0 159 aa7.41□□□□□ -1.22
LINC01840-201ENST00000421870 SPINK7P58062 85 aa7.4□□□□□ -1.22
LINC01840-201ENST00000421870 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
LINC01840-201ENST00000421870 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
LINC01840-201ENST00000421870 SPCS1Q9Y6A9 102 aa7.38□□□□□ -1.23
LINC01840-201ENST00000421870 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
LINC01840-201ENST00000421870 SMCPP49901 116 aaPredicted RBP7.36□□□□□ -1.23
LINC01840-201ENST00000421870 COL5A1-AS1Q5SY13 56 aa7.35□□□□□ -1.23
LINC01840-201ENST00000421870 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
LINC01840-201ENST00000421870 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
LINC01840-201ENST00000421870 K7EQZ3 153 aa7.34□□□□□ -1.23
LINC01840-201ENST00000421870 BPY2O14599 106 aa7.32□□□□□ -1.24
LINC01840-201ENST00000421870 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
LINC01840-201ENST00000421870 PRO0461Q9UI25 63 aa7.31□□□□□ -1.24
LINC01840-201ENST00000421870 K7EP34 96 aa7.27□□□□□ -1.25
LINC01840-201ENST00000421870 MT2AP02795 61 aa7.27□□□□□ -1.25
LINC01840-201ENST00000421870 WFDC13Q8IUB5 93 aa7.25□□□□□ -1.25
LINC01840-201ENST00000421870 NDUFS5O43920 106 aa7.24□□□□□ -1.25
LINC01840-201ENST00000421870 LINC00846Q9NV44 126 aa7.24□□□□□ -1.25
LINC01840-201ENST00000421870 Q8N9L7 120 aa7.23□□□□□ -1.25
LINC01840-201ENST00000421870 MT1FP04733 61 aa7.21□□□□□ -1.26
LINC01840-201ENST00000421870 Q5W150 140 aa7.21□□□□□ -1.26
LINC01840-201ENST00000421870 CASC2Q6XLA1 102 aa7.21□□□□□ -1.26
LINC01840-201ENST00000421870 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
LINC01840-201ENST00000421870 GTF2H5Q6ZYL4 71 aa7.19□□□□□ -1.26
LINC01840-201ENST00000421870 F8W1H4 67 aa7.18□□□□□ -1.26
LINC01840-201ENST00000421870 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
LINC01840-201ENST00000421870 HCG22E2RYF7 251 aa7.16□□□□□ -1.26
LINC01840-201ENST00000421870 KRTAP10-10P60014 251 aa7.16□□□□□ -1.26
LINC01840-201ENST00000421870 USH2AO75445 5202 aa7.16□□□□□ -1.26
LINC01840-201ENST00000421870 PCP4L1A6NKN8 68 aa7.15□□□□□ -1.26
LINC01840-201ENST00000421870 C7orf65Q6ZTY9 151 aa7.14□□□□□ -1.27
LINC01840-201ENST00000421870 IGKV2D-30A0A075B6S6 120 aa7.13□□□□□ -1.27
LINC01840-201ENST00000421870 IGKV2-30P06310 120 aa7.13□□□□□ -1.27
LINC01840-201ENST00000421870 CXCL6P80162 114 aa7.13□□□□□ -1.27
LINC01840-201ENST00000421870 H1FX-AS1Q4G0G2 97 aa7.13□□□□□ -1.27
LINC01840-201ENST00000421870 LCE2BO14633 110 aa7.12□□□□□ -1.27
LINC01840-201ENST00000421870 ETDBQ3ZM63 59 aa7.11□□□□□ -1.27
LINC01840-201ENST00000421870 SSPOA2VEC9 5147 aa7.06□□□□□ -1.28
LINC01840-201ENST00000421870 C4orf26Q17RF5 130 aa7.03□□□□□ -1.28
LINC01840-201ENST00000421870 TP53AIP1Q9HCN2 124 aa7.02□□□□□ -1.29
LINC01840-201ENST00000421870 ACYP1P07311 99 aa6.98□□□□□ -1.29
LINC01840-201ENST00000421870 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
LINC01840-201ENST00000421870 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
LINC01840-201ENST00000421870 FAM240AA0A1B0GVK7 77 aa6.93□□□□□ -1.3
LINC01840-201ENST00000421870 FCGBPQ9Y6R7 5405 aaPredicted RBP6.93□□□□□ -1.3
LINC01840-201ENST00000421870 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
LINC01840-201ENST00000421870 C1orf64Q8NEQ6 169 aa6.91□□□□□ -1.3
LINC01840-201ENST00000421870 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
LINC01840-201ENST00000421870 CYP4F30PQ9H0H9 118 aa6.88□□□□□ -1.31
LINC01840-201ENST00000421870 KRTAP19-6Q3LI70 58 aa6.87□□□□□ -1.31
LINC01840-201ENST00000421870 C5orf47Q569G3 176 aa6.86□□□□□ -1.31
LINC01840-201ENST00000421870 S4R3F8 94 aa6.86□□□□□ -1.31
LINC01840-201ENST00000421870 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
LINC01840-201ENST00000421870 LCA10Q71F78 164 aa6.84□□□□□ -1.31
LINC01840-201ENST00000421870 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
LINC01840-201ENST00000421870 HIST1H4AP62805 103 aaKnown RBP6.82□□□□□ -1.32
LINC01840-201ENST00000421870 LOC101927531A0A1B0GV80 90 aa6.81□□□□□ -1.32
LINC01840-201ENST00000421870 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
LINC01840-201ENST00000421870 LINC00643Q86TS7 51 aa6.8□□□□□ -1.32
LINC01840-201ENST00000421870 UQCRQO14949 82 aa6.79□□□□□ -1.32
LINC01840-201ENST00000421870 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
LINC01840-201ENST00000421870 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
LINC01840-201ENST00000421870 A0A1B0GV90 55 aa6.77□□□□□ -1.33
LINC01840-201ENST00000421870 A0A087WVE0 104 aa6.74□□□□□ -1.33
LINC01840-201ENST00000421870 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
LINC01840-201ENST00000421870 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
LINC01840-201ENST00000421870 ATOX1O00244 68 aa6.74□□□□□ -1.33
LINC01840-201ENST00000421870 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
LINC01840-201ENST00000421870 H0Y9P7 68 aa6.73□□□□□ -1.33
LINC01840-201ENST00000421870 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms