RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 NDUFB1O75438 58 aa9.57□□□□□ -0.88
LINC00271-201ENST00000421378 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 BPY2O14599 106 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 ACYP1P07311 99 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 UBR4Q5T4S7 5183 aa9.56□□□□□ -0.88
LINC00271-201ENST00000421378 DSCR10P59022 87 aa9.54□□□□□ -0.88
LINC00271-201ENST00000421378 LINC00313P59037 77 aa9.54□□□□□ -0.88
LINC00271-201ENST00000421378 IGKV3D-7A0A0C4DH55 119 aa9.52□□□□□ -0.89
LINC00271-201ENST00000421378 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
LINC00271-201ENST00000421378 NOTCH2NLQ7Z3S9 236 aa9.5□□□□□ -0.89
LINC00271-201ENST00000421378 PRR15Q8IV56 129 aa9.5□□□□□ -0.89
LINC00271-201ENST00000421378 J3QR89 54 aa9.49□□□□□ -0.89
LINC00271-201ENST00000421378 K7EQZ3 153 aa9.49□□□□□ -0.89
LINC00271-201ENST00000421378 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
LINC00271-201ENST00000421378 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
LINC00271-201ENST00000421378 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
LINC00271-201ENST00000421378 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
LINC00271-201ENST00000421378 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 Q75L30 129 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 Q8N9L7 120 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
LINC00271-201ENST00000421378 CXCL6P80162 114 aa9.43□□□□□ -0.9
LINC00271-201ENST00000421378 C20orf166-AS1Q96NR2 134 aa9.43□□□□□ -0.9
LINC00271-201ENST00000421378 A8MUU9 505 aa9.41□□□□□ -0.9
LINC00271-201ENST00000421378 MMP24-AS1A0A0U1RRL7 71 aa9.4□□□□□ -0.9
LINC00271-201ENST00000421378 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
LINC00271-201ENST00000421378 ATP5EP2Q5VTU8 51 aa9.38□□□□□ -0.91
LINC00271-201ENST00000421378 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
LINC00271-201ENST00000421378 hDV103S1A0JD37 113 aa9.36□□□□□ -0.91
LINC00271-201ENST00000421378 ATP11AUNQ6ZP68 121 aa9.36□□□□□ -0.91
LINC00271-201ENST00000421378 K7ERU9 68 aa9.35□□□□□ -0.91
LINC00271-201ENST00000421378 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
LINC00271-201ENST00000421378 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
LINC00271-201ENST00000421378 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
LINC00271-201ENST00000421378 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
LINC00271-201ENST00000421378 MRPL34Q9BQ48 92 aaKnown RBP9.33□□□□□ -0.92
LINC00271-201ENST00000421378 MUC2Q02817 5179 aa9.32□□□□□ -0.92
LINC00271-201ENST00000421378 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
LINC00271-201ENST00000421378 WFDC13Q8IUB5 93 aa9.32□□□□□ -0.92
LINC00271-201ENST00000421378 HCG22E2RYF7 251 aa9.31□□□□□ -0.92
LINC00271-201ENST00000421378 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.93
LINC00271-201ENST00000421378 NDUFS5O43920 106 aa9.25□□□□□ -0.93
LINC00271-201ENST00000421378 KRTAP4-1Q9BYQ7 146 aa9.24□□□□□ -0.93
LINC00271-201ENST00000421378 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
LINC00271-201ENST00000421378 A0A087WVE0 104 aa9.17□□□□□ -0.94
LINC00271-201ENST00000421378 MT-ATP8P03928 68 aa9.1□□□□□ -0.95
LINC00271-201ENST00000421378 TP53AIP1Q9HCN2 124 aa9.1□□□□□ -0.95
LINC00271-201ENST00000421378 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
LINC00271-201ENST00000421378 Q5W150 140 aa9.08□□□□□ -0.96
LINC00271-201ENST00000421378 IMUPQ9GZP8 106 aa9.08□□□□□ -0.96
LINC00271-201ENST00000421378 SPINK7P58062 85 aa9.05□□□□□ -0.96
LINC00271-201ENST00000421378 IGKV2D-30A0A075B6S6 120 aa8.99□□□□□ -0.97
LINC00271-201ENST00000421378 IGKV2-30P06310 120 aa8.99□□□□□ -0.97
LINC00271-201ENST00000421378 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
LINC00271-201ENST00000421378 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 UQCRQO14949 82 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 HRES1P13985 223 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 KRTAP19-2Q3LHN2 52 aa8.97□□□□□ -0.97
LINC00271-201ENST00000421378 SCGB1A1P11684 91 aa8.96□□□□□ -0.97
LINC00271-201ENST00000421378 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
LINC00271-201ENST00000421378 COX6B2Q6YFQ2 88 aa8.95□□□□□ -0.98
LINC00271-201ENST00000421378 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
LINC00271-201ENST00000421378 FAM236AA0A1B0GUQ0 79 aa8.93□□□□□ -0.98
LINC00271-201ENST00000421378 FAM236BA0A1B0GV22 79 aa8.93□□□□□ -0.98
LINC00271-201ENST00000421378 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
LINC00271-201ENST00000421378 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
LINC00271-201ENST00000421378 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
LINC00271-201ENST00000421378 H0Y9P7 68 aa8.89□□□□□ -0.99
LINC00271-201ENST00000421378 ATOX1O00244 68 aa8.89□□□□□ -0.99
LINC00271-201ENST00000421378 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
LINC00271-201ENST00000421378 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
LINC00271-201ENST00000421378 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
LINC00271-201ENST00000421378 MP68P56378 58 aa8.83□□□□□ -1
LINC00271-201ENST00000421378 C5orf47Q569G3 176 aa8.83□□□□□ -1
LINC00271-201ENST00000421378 SMIM20Q8N5G0 67 aa8.82□□□□□ -1
LINC00271-201ENST00000421378 CYP4F30PQ9H0H9 118 aa8.82□□□□□ -1
LINC00271-201ENST00000421378 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
LINC00271-201ENST00000421378 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
LINC00271-201ENST00000421378 MT1HP80294 61 aa8.79□□□□□ -1
LINC00271-201ENST00000421378 LINC00208Q96KT6 92 aa8.79□□□□□ -1
LINC00271-201ENST00000421378 C4orf26Q17RF5 130 aa8.78□□□□□ -1
LINC00271-201ENST00000421378 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
LINC00271-201ENST00000421378 H3BPC8 53 aa8.75□□□□□ -1.01
LINC00271-201ENST00000421378 FLGP20930 4061 aaPredicted RBP8.72□□□□□ -1.01
LINC00271-201ENST00000421378 M0R2T5 61 aa8.69□□□□□ -1.02
LINC00271-201ENST00000421378 H1FX-AS1Q4G0G2 97 aa8.67□□□□□ -1.02
LINC00271-201ENST00000421378 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
LINC00271-201ENST00000421378 KLKP1Q107X0 134 aa8.66□□□□□ -1.02
LINC00271-201ENST00000421378 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
LINC00271-201ENST00000421378 C20orf197Q8N268 126 aa8.56□□□□□ -1.04
LINC00271-201ENST00000421378 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
LINC00271-201ENST00000421378 COX7CP15954 63 aa8.54□□□□□ -1.04
LINC00271-201ENST00000421378 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
LINC00271-201ENST00000421378 A8MUN3 132 aa8.52□□□□□ -1.04
LINC00271-201ENST00000421378 LORP23490 312 aaPredicted RBP8.52□□□□□ -1.05
LINC00271-201ENST00000421378 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
LINC00271-201ENST00000421378 S4R3F8 94 aa8.51□□□□□ -1.05
LINC00271-201ENST00000421378 LCA10Q71F78 164 aa8.45□□□□□ -1.06
LINC00271-201ENST00000421378 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
LINC00271-201ENST00000421378 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms