RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 PTPN13Q12923 2485 aa1.13□□□□□ -2.23
PTP4A1P1-201ENST00000420539 WNK1Q9H4A3 2382 aa1.12□□□□□ -2.23
PTP4A1P1-201ENST00000420539 HIVEP3Q5T1R4 2406 aa1.12□□□□□ -2.23
PTP4A1P1-201ENST00000420539 PDZD2O15018 2839 aa1.11□□□□□ -2.23
PTP4A1P1-201ENST00000420539 NAV2Q8IVL1 2488 aa1.11□□□□□ -2.23
PTP4A1P1-201ENST00000420539 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
PTP4A1P1-201ENST00000420539 C9orf92A6NGG3 77 aa1.11□□□□□ -2.23
PTP4A1P1-201ENST00000420539 PRCDQ00LT1 54 aa1.11□□□□□ -2.23
PTP4A1P1-201ENST00000420539 HUWE1Q7Z6Z7 4374 aaKnown RBP1.1□□□□□ -2.23
PTP4A1P1-201ENST00000420539 H3BNG1 76 aa1.09□□□□□ -2.23
PTP4A1P1-201ENST00000420539 SETXQ7Z333 2677 aaKnown RBP1.08□□□□□ -2.24
PTP4A1P1-201ENST00000420539 ACANP16112 2415 aa1.07□□□□□ -2.24
PTP4A1P1-201ENST00000420539 DNAH11Q96DT5 4516 aa1.07□□□□□ -2.24
PTP4A1P1-201ENST00000420539 NF1P21359 2839 aa1.07□□□□□ -2.24
PTP4A1P1-201ENST00000420539 COL6A5A8TX70 2615 aa1.07□□□□□ -2.24
PTP4A1P1-201ENST00000420539 DMBT1Q9UGM3 2413 aaPredicted RBP1.06□□□□□ -2.24
PTP4A1P1-201ENST00000420539 SACSQ9NZJ4 4579 aa1.06□□□□□ -2.24
PTP4A1P1-201ENST00000420539 DEFB108AA8MXU0 73 aa1.06□□□□□ -2.24
PTP4A1P1-201ENST00000420539 TNP1P09430 55 aa1.06□□□□□ -2.24
PTP4A1P1-201ENST00000420539 DEFB104AQ8WTQ1 72 aa1.06□□□□□ -2.24
PTP4A1P1-201ENST00000420539 VPS13BQ7Z7G8 4022 aa1.06□□□□□ -2.24
PTP4A1P1-201ENST00000420539 CHD7Q9P2D1 2997 aa1.05□□□□□ -2.24
PTP4A1P1-201ENST00000420539 RPL39P5Q59GN2 51 aa1.05□□□□□ -2.24
PTP4A1P1-201ENST00000420539 TMEM167AQ8TBQ9 72 aa1.05□□□□□ -2.24
PTP4A1P1-201ENST00000420539 SETD2Q9BYW2 2564 aaPredicted RBP1.04□□□□□ -2.24
PTP4A1P1-201ENST00000420539 KMT2AQ03164 3969 aa1.04□□□□□ -2.24
PTP4A1P1-201ENST00000420539 GCN1Q92616 2671 aaKnown RBP1.04□□□□□ -2.24
PTP4A1P1-201ENST00000420539 APC2O95996 2303 aa1.03□□□□□ -2.25
PTP4A1P1-201ENST00000420539 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
PTP4A1P1-201ENST00000420539 ACACAQ13085 2346 aa1.01□□□□□ -2.25
PTP4A1P1-201ENST00000420539 ZZEF1O43149 2961 aa1.01□□□□□ -2.25
PTP4A1P1-201ENST00000420539 FLNCQ14315 2725 aa1.01□□□□□ -2.25
PTP4A1P1-201ENST00000420539 K7EIM0 57 aa1.01□□□□□ -2.25
PTP4A1P1-201ENST00000420539 STATHP02808 62 aa1.01□□□□□ -2.25
PTP4A1P1-201ENST00000420539 MYCBP2O75592 4640 aa1□□□□□ -2.25
PTP4A1P1-201ENST00000420539 APELAP0DMC3 54 aa0.99□□□□□ -2.25
PTP4A1P1-201ENST00000420539 SPRR2DP22532 72 aa0.98□□□□□ -2.25
PTP4A1P1-201ENST00000420539 NSD1Q96L73 2696 aaPredicted RBP0.98□□□□□ -2.25
PTP4A1P1-201ENST00000420539 STAB1Q9NY15 2570 aa0.98□□□□□ -2.25
PTP4A1P1-201ENST00000420539 DEFB110Q30KQ9 67 aa0.97□□□□□ -2.25
PTP4A1P1-201ENST00000420539 VPS13DQ5THJ4 4388 aa0.96□□□□□ -2.26
PTP4A1P1-201ENST00000420539 RIF1Q5UIP0 2472 aaKnown RBP0.96□□□□□ -2.26
PTP4A1P1-201ENST00000420539 HTN1P15515 57 aa0.96□□□□□ -2.26
PTP4A1P1-201ENST00000420539 MTORP42345 2549 aa0.96□□□□□ -2.26
PTP4A1P1-201ENST00000420539 DMXL1Q9Y485 3027 aa0.96□□□□□ -2.26
PTP4A1P1-201ENST00000420539 LRP1Q07954 4544 aaKnown RBP0.96□□□□□ -2.26
PTP4A1P1-201ENST00000420539 CCDC168Q8NDH2 2452 aa0.95□□□□□ -2.26
PTP4A1P1-201ENST00000420539 PKD1P98161 4303 aa0.95□□□□□ -2.26
PTP4A1P1-201ENST00000420539 TACC2O95359 2948 aa0.95□□□□□ -2.26
PTP4A1P1-201ENST00000420539 FLNBO75369 2602 aaKnown RBP0.94□□□□□ -2.26
PTP4A1P1-201ENST00000420539 USP24Q9UPU5 2620 aa0.94□□□□□ -2.26
PTP4A1P1-201ENST00000420539 SPTBN4Q9H254 2564 aa0.94□□□□□ -2.26
PTP4A1P1-201ENST00000420539 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
PTP4A1P1-201ENST00000420539 LRRK2Q5S007 2527 aa0.92□□□□□ -2.26
PTP4A1P1-201ENST00000420539 CUBNO60494 3623 aa0.92□□□□□ -2.26
PTP4A1P1-201ENST00000420539 EPG5Q9HCE0 2579 aa0.92□□□□□ -2.26
PTP4A1P1-201ENST00000420539 RHPN1-AS1Q9BWJ2 59 aa0.92□□□□□ -2.26
PTP4A1P1-201ENST00000420539 DNAH3Q8TD57 4116 aa0.91□□□□□ -2.26
PTP4A1P1-201ENST00000420539 LPAP08519 4548 aa0.91□□□□□ -2.26
PTP4A1P1-201ENST00000420539 DEFB108BQ8NET1 73 aa0.91□□□□□ -2.26
PTP4A1P1-201ENST00000420539 COX14Q96I36 57 aa0.91□□□□□ -2.26
PTP4A1P1-201ENST00000420539 TENM2Q9NT68 2774 aa0.91□□□□□ -2.26
PTP4A1P1-201ENST00000420539 COL7A1Q02388 2944 aa0.91□□□□□ -2.26
PTP4A1P1-201ENST00000420539 NCOR2Q9Y618 2525 aa0.9□□□□□ -2.26
PTP4A1P1-201ENST00000420539 SPART-AS1P0CW21 52 aa0.9□□□□□ -2.27
PTP4A1P1-201ENST00000420539 SPRR2BP35325 72 aa0.9□□□□□ -2.27
PTP4A1P1-201ENST00000420539 DEFB1P60022 68 aa0.9□□□□□ -2.27
PTP4A1P1-201ENST00000420539 DCHS2Q6V1P9 2916 aa0.9□□□□□ -2.27
PTP4A1P1-201ENST00000420539 HRNRQ86YZ3 2850 aaPredicted RBP0.9□□□□□ -2.27
PTP4A1P1-201ENST00000420539 CRYBG3Q68DQ2 2970 aa0.9□□□□□ -2.27
PTP4A1P1-201ENST00000420539 HSPG2P98160 4391 aa0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 CACNA1AO00555 2505 aa0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 SPENQ96T58 3664 aaKnown RBP0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 COL12A1Q99715 3063 aa0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 DNAH2Q9P225 4427 aa0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 H3BUX3 64 aa0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 ANKHD1Q8IWZ3 2542 aaKnown RBP0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 ANK3Q12955 4377 aaKnown RBP0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 FAM186AA6NE01 2351 aa0.89□□□□□ -2.27
PTP4A1P1-201ENST00000420539 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
PTP4A1P1-201ENST00000420539 DYNC2H1Q8NCM8 4307 aaKnown RBP0.88□□□□□ -2.27
PTP4A1P1-201ENST00000420539 NBEAL2Q6ZNJ1 2754 aa0.87□□□□□ -2.27
PTP4A1P1-201ENST00000420539 FRYQ5TBA9 3013 aa0.87□□□□□ -2.27
PTP4A1P1-201ENST00000420539 A0A096LNI7 61 aa0.87□□□□□ -2.27
PTP4A1P1-201ENST00000420539 DEFB136Q30KP8 78 aa0.87□□□□□ -2.27
PTP4A1P1-201ENST00000420539 PKHD1L1Q86WI1 4243 aa0.87□□□□□ -2.27
PTP4A1P1-201ENST00000420539 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
PTP4A1P1-201ENST00000420539 HECTD4Q9Y4D8 3996 aa0.87□□□□□ -2.27
PTP4A1P1-201ENST00000420539 ANKRD11Q6UB99 2663 aaPredicted RBP0.86□□□□□ -2.27
PTP4A1P1-201ENST00000420539 RANBP2P49792 3224 aaKnown RBP0.86□□□□□ -2.27
PTP4A1P1-201ENST00000420539 DNAH9Q9NYC9 4486 aa0.84□□□□□ -2.27
PTP4A1P1-201ENST00000420539 USP9YO00507 2555 aaPredicted RBP0.84□□□□□ -2.28
PTP4A1P1-201ENST00000420539 A0A096LPF7 62 aa0.83□□□□□ -2.28
PTP4A1P1-201ENST00000420539 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
PTP4A1P1-201ENST00000420539 ACACBO00763 2458 aa0.82□□□□□ -2.28
PTP4A1P1-201ENST00000420539 DNAH8Q96JB1 4490 aa0.82□□□□□ -2.28
PTP4A1P1-201ENST00000420539 SPG11Q96JI7 2443 aa0.82□□□□□ -2.28
PTP4A1P1-201ENST00000420539 Q9Y3F1 56 aa0.82□□□□□ -2.28
PTP4A1P1-201ENST00000420539 KALRNO60229 2985 aa0.81□□□□□ -2.28
PTP4A1P1-201ENST00000420539 IGSF10Q6WRI0 2623 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms