RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 IGHV6-1A0A0B4J1U7 121 aa10.33□□□□□ -0.76
MCF2L-212ENST00000420013 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
MCF2L-212ENST00000420013 KRTAP9-8Q9BYQ0 159 aa10.31□□□□□ -0.76
MCF2L-212ENST00000420013 LINC00472Q9H8W2 130 aa10.31□□□□□ -0.76
MCF2L-212ENST00000420013 COL5A1-AS1Q5SY13 56 aa10.3□□□□□ -0.76
MCF2L-212ENST00000420013 A0A1W2PPM0 123 aa10.29□□□□□ -0.76
MCF2L-212ENST00000420013 PCP4L1A6NKN8 68 aa10.29□□□□□ -0.76
MCF2L-212ENST00000420013 FAM236DA0A1B0GTK5 79 aa10.28□□□□□ -0.76
MCF2L-212ENST00000420013 FAM236CP0DP71 79 aa10.28□□□□□ -0.76
MCF2L-212ENST00000420013 C9JAW5 83 aa10.27□□□□□ -0.77
MCF2L-212ENST00000420013 NOTCH2NLQ7Z3S9 236 aa10.26□□□□□ -0.77
MCF2L-212ENST00000420013 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
MCF2L-212ENST00000420013 C21orf62-AS1Q17RA5 79 aa10.25□□□□□ -0.77
MCF2L-212ENST00000420013 MPLKIPQ8TAP9 179 aa10.25□□□□□ -0.77
MCF2L-212ENST00000420013 C8orf87E5RJ46 101 aa10.23□□□□□ -0.77
MCF2L-212ENST00000420013 A0A1B0GVX0 72 aa10.22□□□□□ -0.77
MCF2L-212ENST00000420013 JMJD7-PLA2G4BH0Y9G9 81 aa10.22□□□□□ -0.77
MCF2L-212ENST00000420013 HRES1P13985 223 aa10.22□□□□□ -0.77
MCF2L-212ENST00000420013 J3KT08 172 aa10.2□□□□□ -0.78
MCF2L-212ENST00000420013 SPCS1Q9Y6A9 102 aa10.18□□□□□ -0.78
MCF2L-212ENST00000420013 USH2AO75445 5202 aa10.18□□□□□ -0.78
MCF2L-212ENST00000420013 NDUFB1O75438 58 aa10.17□□□□□ -0.78
MCF2L-212ENST00000420013 MT2AP02795 61 aa10.15□□□□□ -0.78
MCF2L-212ENST00000420013 Q6ZQT0 140 aa10.15□□□□□ -0.78
MCF2L-212ENST00000420013 H3BT86 120 aa10.14□□□□□ -0.79
MCF2L-212ENST00000420013 PDE6GP18545 87 aa10.14□□□□□ -0.79
MCF2L-212ENST00000420013 LOC110117498A0A087WWA1 95 aa10.13□□□□□ -0.79
MCF2L-212ENST00000420013 MTURNQ8N3F0 131 aa10.11□□□□□ -0.79
MCF2L-212ENST00000420013 SSPOA2VEC9 5147 aa10.1□□□□□ -0.79
MCF2L-212ENST00000420013 A0A1B0GW54 56 aa10.1□□□□□ -0.79
MCF2L-212ENST00000420013 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
MCF2L-212ENST00000420013 K7EP34 96 aa10.09□□□□□ -0.79
MCF2L-212ENST00000420013 ZCCHC13Q8WW36 166 aaKnown RBP10.09□□□□□ -0.79
MCF2L-212ENST00000420013 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-212ENST00000420013 MT1FP04733 61 aa10.06□□□□□ -0.8
MCF2L-212ENST00000420013 A8MWP4 228 aa10.05□□□□□ -0.8
MCF2L-212ENST00000420013 GTF2H5Q6ZYL4 71 aa10.04□□□□□ -0.8
MCF2L-212ENST00000420013 KRTAP9-7A8MTY7 169 aa10.02□□□□□ -0.81
MCF2L-212ENST00000420013 Q8N9P0 234 aaPredicted RBP10.02□□□□□ -0.81
MCF2L-212ENST00000420013 C8orf17Q9NRJ1 99 aa10.02□□□□□ -0.81
MCF2L-212ENST00000420013 SPINK7P58062 85 aa10.01□□□□□ -0.81
MCF2L-212ENST00000420013 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
MCF2L-212ENST00000420013 NREPQ16612 68 aa10.01□□□□□ -0.81
MCF2L-212ENST00000420013 PRO0461Q9UI25 63 aa10□□□□□ -0.81
MCF2L-212ENST00000420013 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-212ENST00000420013 KRTAP9-3Q9BYQ3 159 aa9.99□□□□□ -0.81
MCF2L-212ENST00000420013 IGKV3D-7A0A0C4DH55 119 aa9.98□□□□□ -0.81
MCF2L-212ENST00000420013 LCE2BO14633 110 aa9.97□□□□□ -0.81
MCF2L-212ENST00000420013 Q6ZVQ6 151 aa9.96□□□□□ -0.82
MCF2L-212ENST00000420013 FCGBPQ9Y6R7 5405 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-212ENST00000420013 PRR15Q8IV56 129 aa9.93□□□□□ -0.82
MCF2L-212ENST00000420013 F8W1H4 67 aa9.92□□□□□ -0.82
MCF2L-212ENST00000420013 WFDC13Q8IUB5 93 aa9.91□□□□□ -0.82
MCF2L-212ENST00000420013 KRTAP19-1Q8IUB9 90 aa9.9□□□□□ -0.82
MCF2L-212ENST00000420013 NDUFS5O43920 106 aa9.87□□□□□ -0.83
MCF2L-212ENST00000420013 MRPL34Q9BQ48 92 aaKnown RBP9.87□□□□□ -0.83
MCF2L-212ENST00000420013 TMEM254Q8TBM7 123 aa9.86□□□□□ -0.83
MCF2L-212ENST00000420013 MMP24-AS1A0A0U1RRL7 71 aa9.83□□□□□ -0.84
MCF2L-212ENST00000420013 hDV103S1A0JD37 113 aa9.83□□□□□ -0.84
MCF2L-212ENST00000420013 K7EQZ3 153 aa9.82□□□□□ -0.84
MCF2L-212ENST00000420013 BPY2O14599 106 aa9.82□□□□□ -0.84
MCF2L-212ENST00000420013 LINC00846Q9NV44 126 aa9.82□□□□□ -0.84
MCF2L-212ENST00000420013 ETDBQ3ZM63 59 aa9.8□□□□□ -0.84
MCF2L-212ENST00000420013 A0A1B0GV90 55 aa9.76□□□□□ -0.85
MCF2L-212ENST00000420013 KRTAP19-6Q3LI70 58 aa9.73□□□□□ -0.85
MCF2L-212ENST00000420013 IGKV2D-30A0A075B6S6 120 aa9.71□□□□□ -0.86
MCF2L-212ENST00000420013 IGKV2-30P06310 120 aa9.71□□□□□ -0.86
MCF2L-212ENST00000420013 UBL5Q9BZL1 73 aa9.71□□□□□ -0.86
MCF2L-212ENST00000420013 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
MCF2L-212ENST00000420013 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
MCF2L-212ENST00000420013 Q8N9L7 120 aa9.67□□□□□ -0.86
MCF2L-212ENST00000420013 C7orf65Q6ZTY9 151 aa9.66□□□□□ -0.86
MCF2L-212ENST00000420013 HCG22E2RYF7 251 aa9.64□□□□□ -0.87
MCF2L-212ENST00000420013 MACF1Q9UPN3 7388 aaKnown RBP9.64□□□□□ -0.87
MCF2L-212ENST00000420013 Q5W150 140 aa9.61□□□□□ -0.87
MCF2L-212ENST00000420013 FAM240AA0A1B0GVK7 77 aa9.6□□□□□ -0.87
MCF2L-212ENST00000420013 ACYP1P07311 99 aa9.6□□□□□ -0.87
MCF2L-212ENST00000420013 CXCL6P80162 114 aa9.57□□□□□ -0.88
MCF2L-212ENST00000420013 C4orf26Q17RF5 130 aa9.51□□□□□ -0.89
MCF2L-212ENST00000420013 SYNE2Q8WXH0 6885 aaKnown RBP9.48□□□□□ -0.89
MCF2L-212ENST00000420013 ATP5EP2Q5VTU8 51 aa9.45□□□□□ -0.9
MCF2L-212ENST00000420013 J3QR89 54 aa9.44□□□□□ -0.9
MCF2L-212ENST00000420013 C5orf47Q569G3 176 aa9.38□□□□□ -0.91
MCF2L-212ENST00000420013 LINC00643Q86TS7 51 aa9.38□□□□□ -0.91
MCF2L-212ENST00000420013 KRTAP6-3Q3LI67 103 aa9.37□□□□□ -0.91
MCF2L-212ENST00000420013 TP53AIP1Q9HCN2 124 aa9.37□□□□□ -0.91
MCF2L-212ENST00000420013 FAM236AA0A1B0GUQ0 79 aa9.35□□□□□ -0.91
MCF2L-212ENST00000420013 FAM236BA0A1B0GV22 79 aa9.35□□□□□ -0.91
MCF2L-212ENST00000420013 C1orf64Q8NEQ6 169 aa9.34□□□□□ -0.91
MCF2L-212ENST00000420013 S4R3F8 94 aa9.34□□□□□ -0.91
MCF2L-212ENST00000420013 HIST1H4AP62805 103 aaKnown RBP9.29□□□□□ -0.92
MCF2L-212ENST00000420013 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
MCF2L-212ENST00000420013 KRTAP3-1Q9BYR8 98 aa9.26□□□□□ -0.93
MCF2L-212ENST00000420013 K7ERU9 68 aa9.25□□□□□ -0.93
MCF2L-212ENST00000420013 Q5VV11 94 aa9.22□□□□□ -0.93
MCF2L-212ENST00000420013 LCA10Q71F78 164 aa9.22□□□□□ -0.93
MCF2L-212ENST00000420013 SPRR2GQ9BYE4 73 aa9.21□□□□□ -0.94
MCF2L-212ENST00000420013 A6NN06 94 aa9.2□□□□□ -0.94
MCF2L-212ENST00000420013 MT1BP07438 61 aa9.19□□□□□ -0.94
MCF2L-212ENST00000420013 KRTAP19-8Q3LI54 63 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms