RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
PTCD1-202ENST00000419981 A0A1B0GVX0 72 aa8.54□□□□□ -1.04
PTCD1-202ENST00000419981 LCE2BO14633 110 aa8.53□□□□□ -1.04
PTCD1-202ENST00000419981 MTURNQ8N3F0 131 aa8.52□□□□□ -1.05
PTCD1-202ENST00000419981 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
PTCD1-202ENST00000419981 RBM3P98179 157 aaKnown RBP8.5□□□□□ -1.05
PTCD1-202ENST00000419981 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
PTCD1-202ENST00000419981 ZCCHC13Q8WW36 166 aaKnown RBP8.49□□□□□ -1.05
PTCD1-202ENST00000419981 DSCR8Q96T75 97 aa8.49□□□□□ -1.05
PTCD1-202ENST00000419981 FCGBPQ9Y6R7 5405 aaPredicted RBP8.47□□□□□ -1.05
PTCD1-202ENST00000419981 J3KT08 172 aa8.46□□□□□ -1.06
PTCD1-202ENST00000419981 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
PTCD1-202ENST00000419981 SCGB1C2P0DMR2 95 aa8.45□□□□□ -1.06
PTCD1-202ENST00000419981 SPINK7P58062 85 aa8.45□□□□□ -1.06
PTCD1-202ENST00000419981 C21orf62-AS1Q17RA5 79 aa8.45□□□□□ -1.06
PTCD1-202ENST00000419981 C9JAW5 83 aa8.42□□□□□ -1.06
PTCD1-202ENST00000419981 UQCR10Q9UDW1 63 aa8.42□□□□□ -1.06
PTCD1-202ENST00000419981 NDUFB1O75438 58 aa8.41□□□□□ -1.06
PTCD1-202ENST00000419981 Q6ZQT0 140 aa8.4□□□□□ -1.06
PTCD1-202ENST00000419981 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
PTCD1-202ENST00000419981 BAALC-AS2P0C853 105 aa8.39□□□□□ -1.07
PTCD1-202ENST00000419981 LYRM7Q5U5X0 104 aa8.36□□□□□ -1.07
PTCD1-202ENST00000419981 WFDC13Q8IUB5 93 aa8.36□□□□□ -1.07
PTCD1-202ENST00000419981 A8MWP4 228 aa8.35□□□□□ -1.07
PTCD1-202ENST00000419981 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
PTCD1-202ENST00000419981 LINC00846Q9NV44 126 aa8.34□□□□□ -1.07
PTCD1-202ENST00000419981 JMJD7-PLA2G4BH0Y9G9 81 aa8.31□□□□□ -1.08
PTCD1-202ENST00000419981 A0A1B0GW54 56 aa8.3□□□□□ -1.08
PTCD1-202ENST00000419981 IGKV3D-7A0A0C4DH55 119 aa8.29□□□□□ -1.08
PTCD1-202ENST00000419981 LOC110117498A0A087WWA1 95 aa8.28□□□□□ -1.08
PTCD1-202ENST00000419981 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
PTCD1-202ENST00000419981 KRTAP19-6Q3LI70 58 aa8.28□□□□□ -1.08
PTCD1-202ENST00000419981 Q6ZVQ6 151 aa8.28□□□□□ -1.08
PTCD1-202ENST00000419981 PDE6GP18545 87 aa8.26□□□□□ -1.09
PTCD1-202ENST00000419981 SYNE2Q8WXH0 6885 aaKnown RBP8.24□□□□□ -1.09
PTCD1-202ENST00000419981 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
PTCD1-202ENST00000419981 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
PTCD1-202ENST00000419981 NAA38Q9BRA0 125 aaKnown RBP8.23□□□□□ -1.09
PTCD1-202ENST00000419981 C14orf132Q9NPU4 83 aa8.23□□□□□ -1.09
PTCD1-202ENST00000419981 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
PTCD1-202ENST00000419981 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
PTCD1-202ENST00000419981 M0R143 59 aa8.2□□□□□ -1.1
PTCD1-202ENST00000419981 NREPQ16612 68 aa8.2□□□□□ -1.1
PTCD1-202ENST00000419981 TMEM254Q8TBM7 123 aa8.2□□□□□ -1.1
PTCD1-202ENST00000419981 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
PTCD1-202ENST00000419981 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
PTCD1-202ENST00000419981 NDUFS5O43920 106 aa8.15□□□□□ -1.1
PTCD1-202ENST00000419981 hDV103S1A0JD37 113 aa8.14□□□□□ -1.11
PTCD1-202ENST00000419981 K7EQZ3 153 aa8.12□□□□□ -1.11
PTCD1-202ENST00000419981 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
PTCD1-202ENST00000419981 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
PTCD1-202ENST00000419981 C7orf65Q6ZTY9 151 aa8.08□□□□□ -1.12
PTCD1-202ENST00000419981 BPY2O14599 106 aa8.03□□□□□ -1.12
PTCD1-202ENST00000419981 Q5W150 140 aa8.03□□□□□ -1.12
PTCD1-202ENST00000419981 H3BT86 120 aa8.02□□□□□ -1.13
PTCD1-202ENST00000419981 KRTAP6-3Q3LI67 103 aa8.02□□□□□ -1.13
PTCD1-202ENST00000419981 BATFQ16520 125 aa7.99□□□□□ -1.13
PTCD1-202ENST00000419981 HCG22E2RYF7 251 aa7.97□□□□□ -1.13
PTCD1-202ENST00000419981 CASC2Q6XLA1 102 aa7.97□□□□□ -1.13
PTCD1-202ENST00000419981 C4orf26Q17RF5 130 aa7.96□□□□□ -1.14
PTCD1-202ENST00000419981 SMIM6P0DI80 62 aa7.95□□□□□ -1.14
PTCD1-202ENST00000419981 Q8N9L7 120 aa7.95□□□□□ -1.14
PTCD1-202ENST00000419981 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
PTCD1-202ENST00000419981 C9orf118A6NHY6 69 aa7.92□□□□□ -1.14
PTCD1-202ENST00000419981 FAM236AA0A1B0GUQ0 79 aa7.91□□□□□ -1.14
PTCD1-202ENST00000419981 FAM236BA0A1B0GV22 79 aa7.91□□□□□ -1.14
PTCD1-202ENST00000419981 CXCL6P80162 114 aa7.91□□□□□ -1.14
PTCD1-202ENST00000419981 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
PTCD1-202ENST00000419981 A0A1W2PPM0 123 aa7.9□□□□□ -1.14
PTCD1-202ENST00000419981 TAX1BP3O14907 124 aa7.86□□□□□ -1.15
PTCD1-202ENST00000419981 S4R3F8 94 aa7.85□□□□□ -1.15
PTCD1-202ENST00000419981 A6NN06 94 aa7.83□□□□□ -1.16
PTCD1-202ENST00000419981 Q5VV11 94 aa7.82□□□□□ -1.16
PTCD1-202ENST00000419981 MT1BP07438 61 aa7.81□□□□□ -1.16
PTCD1-202ENST00000419981 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
PTCD1-202ENST00000419981 CSAG1Q6PB30 78 aa7.8□□□□□ -1.16
PTCD1-202ENST00000419981 C1orf64Q8NEQ6 169 aa7.79□□□□□ -1.16
PTCD1-202ENST00000419981 UBL5Q9BZL1 73 aa7.79□□□□□ -1.16
PTCD1-202ENST00000419981 LCA10Q71F78 164 aa7.78□□□□□ -1.16
PTCD1-202ENST00000419981 SPCS1Q9Y6A9 102 aa7.78□□□□□ -1.16
PTCD1-202ENST00000419981 SPRR2GQ9BYE4 73 aa7.77□□□□□ -1.17
PTCD1-202ENST00000419981 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
PTCD1-202ENST00000419981 NEBP20929 6669 aa7.75□□□□□ -1.17
PTCD1-202ENST00000419981 SMCPP49901 116 aaPredicted RBP7.75□□□□□ -1.17
PTCD1-202ENST00000419981 KLKP1Q107X0 134 aa7.7□□□□□ -1.18
PTCD1-202ENST00000419981 TP53AIP1Q9HCN2 124 aa7.7□□□□□ -1.18
PTCD1-202ENST00000419981 KRTAP10-5P60370 271 aa7.69□□□□□ -1.18
PTCD1-202ENST00000419981 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
PTCD1-202ENST00000419981 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
PTCD1-202ENST00000419981 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
PTCD1-202ENST00000419981 LOC105371267A0A1B0GV96 52 aa7.59□□□□□ -1.19
PTCD1-202ENST00000419981 K7EP34 96 aa7.59□□□□□ -1.19
PTCD1-202ENST00000419981 COL5A1-AS1Q5SY13 56 aa7.57□□□□□ -1.2
PTCD1-202ENST00000419981 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
PTCD1-202ENST00000419981 CYP4F30PQ9H0H9 118 aa7.57□□□□□ -1.2
PTCD1-202ENST00000419981 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
PTCD1-202ENST00000419981 KRTAP5-9P26371 169 aa7.56□□□□□ -1.2
PTCD1-202ENST00000419981 KRTAP20-1Q3LI63 56 aa7.55□□□□□ -1.2
PTCD1-202ENST00000419981 A0A087WVE0 104 aa7.53□□□□□ -1.2
PTCD1-202ENST00000419981 TRAV22A0A0B4J277 110 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms