RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MRPL34Q9BQ48 92 aaKnown RBP8.54□□□□□ -1.04
HLA-DPA1-242ENST00000419277 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
HLA-DPA1-242ENST00000419277 IGHV6-1A0A0B4J1U7 121 aa8.53□□□□□ -1.04
HLA-DPA1-242ENST00000419277 LINC00208Q96KT6 92 aa8.53□□□□□ -1.04
HLA-DPA1-242ENST00000419277 OXTP01178 125 aa8.51□□□□□ -1.05
HLA-DPA1-242ENST00000419277 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
HLA-DPA1-242ENST00000419277 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
HLA-DPA1-242ENST00000419277 C1orf64Q8NEQ6 169 aa8.49□□□□□ -1.05
HLA-DPA1-242ENST00000419277 A0A087X002 238 aa8.49□□□□□ -1.05
HLA-DPA1-242ENST00000419277 RPS29P62273 56 aaKnown RBP8.48□□□□□ -1.05
HLA-DPA1-242ENST00000419277 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
HLA-DPA1-242ENST00000419277 SPINK1P00995 79 aa8.46□□□□□ -1.06
HLA-DPA1-242ENST00000419277 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
HLA-DPA1-242ENST00000419277 NDUFS5O43920 106 aa8.43□□□□□ -1.06
HLA-DPA1-242ENST00000419277 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
HLA-DPA1-242ENST00000419277 SPAG11AQ6PDA7 123 aa8.43□□□□□ -1.06
HLA-DPA1-242ENST00000419277 A0A1B0GVY2 172 aa8.42□□□□□ -1.06
HLA-DPA1-242ENST00000419277 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
HLA-DPA1-242ENST00000419277 C1orf195Q5TG92 126 aa8.4□□□□□ -1.06
HLA-DPA1-242ENST00000419277 TYMSOSQ8TAI1 123 aa8.4□□□□□ -1.06
HLA-DPA1-242ENST00000419277 HYDINQ4G0P3 5121 aa8.4□□□□□ -1.06
HLA-DPA1-242ENST00000419277 LINC00313P59037 77 aa8.4□□□□□ -1.07
HLA-DPA1-242ENST00000419277 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
HLA-DPA1-242ENST00000419277 IGLV7-46A0A075B6I9 117 aa8.37□□□□□ -1.07
HLA-DPA1-242ENST00000419277 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
HLA-DPA1-242ENST00000419277 FAM229AH3BQW9 127 aa8.36□□□□□ -1.07
HLA-DPA1-242ENST00000419277 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
HLA-DPA1-242ENST00000419277 FP248Q71RG6 208 aaPredicted RBP8.35□□□□□ -1.07
HLA-DPA1-242ENST00000419277 NOTCH2NLQ7Z3S9 236 aa8.34□□□□□ -1.07
HLA-DPA1-242ENST00000419277 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
HLA-DPA1-242ENST00000419277 SEC61GP60059 68 aa8.33□□□□□ -1.08
HLA-DPA1-242ENST00000419277 LINC00304Q8N9R0 145 aa8.32□□□□□ -1.08
HLA-DPA1-242ENST00000419277 V9GYY9 64 aa8.32□□□□□ -1.08
HLA-DPA1-242ENST00000419277 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
HLA-DPA1-242ENST00000419277 Q1T7F1 81 aa8.29□□□□□ -1.08
HLA-DPA1-242ENST00000419277 PKHD1P08F94 4074 aa8.29□□□□□ -1.08
HLA-DPA1-242ENST00000419277 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
HLA-DPA1-242ENST00000419277 PRR4Q16378 134 aa8.26□□□□□ -1.09
HLA-DPA1-242ENST00000419277 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
HLA-DPA1-242ENST00000419277 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
HLA-DPA1-242ENST00000419277 PRO0628Q9UI54 55 aa8.24□□□□□ -1.09
HLA-DPA1-242ENST00000419277 PCOTHQ58A44 107 aa8.23□□□□□ -1.09
HLA-DPA1-242ENST00000419277 PRR26Q8N8Z3 221 aa8.23□□□□□ -1.09
HLA-DPA1-242ENST00000419277 Q5W150 140 aa8.22□□□□□ -1.09
HLA-DPA1-242ENST00000419277 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
HLA-DPA1-242ENST00000419277 COA5Q86WW8 74 aa8.2□□□□□ -1.1
HLA-DPA1-242ENST00000419277 DYNC1H1Q14204 4646 aaKnown RBP8.19□□□□□ -1.1
HLA-DPA1-242ENST00000419277 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
HLA-DPA1-242ENST00000419277 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
HLA-DPA1-242ENST00000419277 APOBP04114 4563 aaKnown RBP8.14□□□□□ -1.11
HLA-DPA1-242ENST00000419277 ACYP2P14621 99 aa8.13□□□□□ -1.11
HLA-DPA1-242ENST00000419277 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
HLA-DPA1-242ENST00000419277 RYR2Q92736 4967 aa8.11□□□□□ -1.11
HLA-DPA1-242ENST00000419277 HRES1P13985 223 aa8.09□□□□□ -1.11
HLA-DPA1-242ENST00000419277 C7orf65Q6ZTY9 151 aa8.06□□□□□ -1.12
HLA-DPA1-242ENST00000419277 C20orf166-AS1Q96NR2 134 aa8.06□□□□□ -1.12
HLA-DPA1-242ENST00000419277 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
HLA-DPA1-242ENST00000419277 A8MUU9 505 aa8.04□□□□□ -1.12
HLA-DPA1-242ENST00000419277 KMT2CQ8NEZ4 4911 aaKnown RBP8.03□□□□□ -1.12
HLA-DPA1-242ENST00000419277 A8MUN3 132 aa8.03□□□□□ -1.12
HLA-DPA1-242ENST00000419277 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
HLA-DPA1-242ENST00000419277 Q5VSD8 79 aa8.01□□□□□ -1.13
HLA-DPA1-242ENST00000419277 IGKV2D-30A0A075B6S6 120 aa8□□□□□ -1.13
HLA-DPA1-242ENST00000419277 FAT1Q14517 4588 aa8□□□□□ -1.13
HLA-DPA1-242ENST00000419277 CHKB-CPT1BH3BT56 60 aa7.99□□□□□ -1.13
HLA-DPA1-242ENST00000419277 PSPHP1O15172 72 aa7.99□□□□□ -1.13
HLA-DPA1-242ENST00000419277 Q75L30 129 aa7.99□□□□□ -1.13
HLA-DPA1-242ENST00000419277 BRK1Q8WUW1 75 aa7.99□□□□□ -1.13
HLA-DPA1-242ENST00000419277 Q5VV11 94 aa7.98□□□□□ -1.13
HLA-DPA1-242ENST00000419277 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
HLA-DPA1-242ENST00000419277 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
HLA-DPA1-242ENST00000419277 PRR15LQ9BU68 103 aa7.97□□□□□ -1.13
HLA-DPA1-242ENST00000419277 FLG2Q5D862 2391 aaPredicted RBP7.94□□□□□ -1.14
HLA-DPA1-242ENST00000419277 RYR3Q15413 4870 aa7.93□□□□□ -1.14
HLA-DPA1-242ENST00000419277 C9orf92A6NGG3 77 aa7.89□□□□□ -1.15
HLA-DPA1-242ENST00000419277 Q8N1X5 172 aa7.89□□□□□ -1.15
HLA-DPA1-242ENST00000419277 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
HLA-DPA1-242ENST00000419277 HSPG2P98160 4391 aa7.85□□□□□ -1.15
HLA-DPA1-242ENST00000419277 A6NED7 52 aa7.83□□□□□ -1.16
HLA-DPA1-242ENST00000419277 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
HLA-DPA1-242ENST00000419277 TNXBP22105 4242 aa7.79□□□□□ -1.16
HLA-DPA1-242ENST00000419277 SPINK7P58062 85 aa7.79□□□□□ -1.16
HLA-DPA1-242ENST00000419277 ATP11AUNQ6ZP68 121 aa7.79□□□□□ -1.16
HLA-DPA1-242ENST00000419277 A0A1B0GU69 56 aa7.78□□□□□ -1.16
HLA-DPA1-242ENST00000419277 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
HLA-DPA1-242ENST00000419277 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
HLA-DPA1-242ENST00000419277 RYR1P21817 5038 aa7.74□□□□□ -1.17
HLA-DPA1-242ENST00000419277 FAT3Q8TDW7 4589 aa7.72□□□□□ -1.17
HLA-DPA1-242ENST00000419277 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
HLA-DPA1-242ENST00000419277 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.18
HLA-DPA1-242ENST00000419277 XP32Q5T750 250 aa7.69□□□□□ -1.18
HLA-DPA1-242ENST00000419277 LRP1Q07954 4544 aaKnown RBP7.68□□□□□ -1.18
HLA-DPA1-242ENST00000419277 LCA10Q71F78 164 aa7.67□□□□□ -1.18
HLA-DPA1-242ENST00000419277 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
HLA-DPA1-242ENST00000419277 UQCR11O14957 56 aa7.66□□□□□ -1.18
HLA-DPA1-242ENST00000419277 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
HLA-DPA1-242ENST00000419277 EPPK1P58107 5090 aaKnown RBP7.66□□□□□ -1.18
HLA-DPA1-242ENST00000419277 KRTAP3-1Q9BYR8 98 aa7.62□□□□□ -1.19
HLA-DPA1-242ENST00000419277 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
HLA-DPA1-242ENST00000419277 KRTAP17-1Q9BYP8 105 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms