RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 M0R143 59 aa12.63□□□□□ -0.39
HLA-C-204ENST00000415537 J3KT08 172 aa12.62□□□□□ -0.39
HLA-C-204ENST00000415537 RBM12B-AS1Q9P1G2 102 aa12.62□□□□□ -0.39
HLA-C-204ENST00000415537 ATXN8Q156A1 80 aa12.61□□□□□ -0.39
HLA-C-204ENST00000415537 Q6ZQT0 140 aa12.58□□□□□ -0.4
HLA-C-204ENST00000415537 JMJD7-PLA2G4BH0Y9G9 81 aa12.57□□□□□ -0.4
HLA-C-204ENST00000415537 NAA38Q9BRA0 125 aaKnown RBP12.57□□□□□ -0.4
HLA-C-204ENST00000415537 NDUFB1O75438 58 aa12.55□□□□□ -0.4
HLA-C-204ENST00000415537 HRES1P13985 223 aa12.54□□□□□ -0.4
HLA-C-204ENST00000415537 KRTAP9-8Q9BYQ0 159 aa12.52□□□□□ -0.41
HLA-C-204ENST00000415537 MPLKIPQ8TAP9 179 aa12.51□□□□□ -0.41
HLA-C-204ENST00000415537 LOC110117498A0A087WWA1 95 aa12.49□□□□□ -0.41
HLA-C-204ENST00000415537 A0A1B0GW54 56 aa12.49□□□□□ -0.41
HLA-C-204ENST00000415537 ZCCHC13Q8WW36 166 aaKnown RBP12.49□□□□□ -0.41
HLA-C-204ENST00000415537 PDE6GP18545 87 aa12.48□□□□□ -0.41
HLA-C-204ENST00000415537 LYRM7Q5U5X0 104 aa12.46□□□□□ -0.41
HLA-C-204ENST00000415537 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
HLA-C-204ENST00000415537 SMIM6P0DI80 62 aa12.44□□□□□ -0.42
HLA-C-204ENST00000415537 A8MWP4 228 aa12.43□□□□□ -0.42
HLA-C-204ENST00000415537 C14orf132Q9NPU4 83 aa12.43□□□□□ -0.42
HLA-C-204ENST00000415537 Q8N9P0 234 aaPredicted RBP12.41□□□□□ -0.42
HLA-C-204ENST00000415537 C8orf17Q9NRJ1 99 aa12.41□□□□□ -0.42
HLA-C-204ENST00000415537 SPINK7P58062 85 aa12.4□□□□□ -0.42
HLA-C-204ENST00000415537 IGKV3D-7A0A0C4DH55 119 aa12.37□□□□□ -0.43
HLA-C-204ENST00000415537 BATFQ16520 125 aa12.37□□□□□ -0.43
HLA-C-204ENST00000415537 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
HLA-C-204ENST00000415537 NREPQ16612 68 aa12.36□□□□□ -0.43
HLA-C-204ENST00000415537 MT2AP02795 61 aa12.34□□□□□ -0.43
HLA-C-204ENST00000415537 Q6ZVQ6 151 aa12.32□□□□□ -0.44
HLA-C-204ENST00000415537 PRR15Q8IV56 129 aa12.3□□□□□ -0.44
HLA-C-204ENST00000415537 KRTAP10-10P60014 251 aa12.25□□□□□ -0.45
HLA-C-204ENST00000415537 MT1FP04733 61 aa12.24□□□□□ -0.45
HLA-C-204ENST00000415537 WFDC13Q8IUB5 93 aa12.23□□□□□ -0.45
HLA-C-204ENST00000415537 C9orf118A6NHY6 69 aa12.22□□□□□ -0.45
HLA-C-204ENST00000415537 H3BT86 120 aa12.22□□□□□ -0.45
HLA-C-204ENST00000415537 TMEM254Q8TBM7 123 aa12.21□□□□□ -0.45
HLA-C-204ENST00000415537 MRPL34Q9BQ48 92 aaKnown RBP12.21□□□□□ -0.45
HLA-C-204ENST00000415537 USH2AO75445 5202 aa12.2□□□□□ -0.46
HLA-C-204ENST00000415537 MMP24-AS1A0A0U1RRL7 71 aa12.2□□□□□ -0.46
HLA-C-204ENST00000415537 A0A1W2PPM0 123 aa12.17□□□□□ -0.46
HLA-C-204ENST00000415537 hDV103S1A0JD37 113 aa12.16□□□□□ -0.46
HLA-C-204ENST00000415537 K7EQZ3 153 aa12.15□□□□□ -0.46
HLA-C-204ENST00000415537 TAX1BP3O14907 124 aa12.15□□□□□ -0.46
HLA-C-204ENST00000415537 NDUFS5O43920 106 aa12.15□□□□□ -0.46
HLA-C-204ENST00000415537 KRTAP9-3Q9BYQ3 159 aa12.13□□□□□ -0.47
HLA-C-204ENST00000415537 BPY2O14599 106 aa12.11□□□□□ -0.47
HLA-C-204ENST00000415537 SSPOA2VEC9 5147 aa12.1□□□□□ -0.47
HLA-C-204ENST00000415537 LCE2BO14633 110 aa12.09□□□□□ -0.47
HLA-C-204ENST00000415537 LOC105371267A0A1B0GV96 52 aa12.06□□□□□ -0.48
HLA-C-204ENST00000415537 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.01□□□□□ -0.49
HLA-C-204ENST00000415537 SPCS1Q9Y6A9 102 aa12.01□□□□□ -0.49
HLA-C-204ENST00000415537 IGKV2D-30A0A075B6S6 120 aa11.98□□□□□ -0.49
HLA-C-204ENST00000415537 IGKV2-30P06310 120 aa11.98□□□□□ -0.49
HLA-C-204ENST00000415537 H1FX-AS1Q4G0G2 97 aa11.98□□□□□ -0.49
HLA-C-204ENST00000415537 CASC2Q6XLA1 102 aa11.95□□□□□ -0.5
HLA-C-204ENST00000415537 C7orf65Q6ZTY9 151 aa11.95□□□□□ -0.5
HLA-C-204ENST00000415537 KRTAP19-1Q8IUB9 90 aa11.95□□□□□ -0.5
HLA-C-204ENST00000415537 Q8N9L7 120 aa11.95□□□□□ -0.5
HLA-C-204ENST00000415537 Q5W150 140 aa11.93□□□□□ -0.5
HLA-C-204ENST00000415537 HCG22E2RYF7 251 aa11.91□□□□□ -0.5
HLA-C-204ENST00000415537 KRTAP9-7A8MTY7 169 aa11.9□□□□□ -0.5
HLA-C-204ENST00000415537 SMCPP49901 116 aaPredicted RBP11.89□□□□□ -0.51
HLA-C-204ENST00000415537 UBL5Q9BZL1 73 aa11.86□□□□□ -0.51
HLA-C-204ENST00000415537 FCGBPQ9Y6R7 5405 aaPredicted RBP11.85□□□□□ -0.51
HLA-C-204ENST00000415537 COL5A1-AS1Q5SY13 56 aa11.84□□□□□ -0.51
HLA-C-204ENST00000415537 CXCL6P80162 114 aa11.83□□□□□ -0.52
HLA-C-204ENST00000415537 LINC00846Q9NV44 126 aa11.83□□□□□ -0.52
HLA-C-204ENST00000415537 PRO0461Q9UI25 63 aa11.77□□□□□ -0.53
HLA-C-204ENST00000415537 K7EP34 96 aa11.76□□□□□ -0.53
HLA-C-204ENST00000415537 C4orf26Q17RF5 130 aa11.76□□□□□ -0.53
HLA-C-204ENST00000415537 KRTAP19-6Q3LI70 58 aa11.7□□□□□ -0.54
HLA-C-204ENST00000415537 GTF2H5Q6ZYL4 71 aa11.64□□□□□ -0.55
HLA-C-204ENST00000415537 C5orf47Q569G3 176 aa11.59□□□□□ -0.55
HLA-C-204ENST00000415537 TP53AIP1Q9HCN2 124 aa11.58□□□□□ -0.56
HLA-C-204ENST00000415537 F8W1H4 67 aa11.57□□□□□ -0.56
HLA-C-204ENST00000415537 C1orf64Q8NEQ6 169 aa11.55□□□□□ -0.56
HLA-C-204ENST00000415537 S4R3F8 94 aa11.55□□□□□ -0.56
HLA-C-204ENST00000415537 MACF1Q9UPN3 7388 aaKnown RBP11.54□□□□□ -0.56
HLA-C-204ENST00000415537 KRTAP3-1Q9BYR8 98 aa11.53□□□□□ -0.56
HLA-C-204ENST00000415537 FAM236AA0A1B0GUQ0 79 aa11.52□□□□□ -0.57
HLA-C-204ENST00000415537 FAM236BA0A1B0GV22 79 aa11.52□□□□□ -0.57
HLA-C-204ENST00000415537 ETDBQ3ZM63 59 aa11.52□□□□□ -0.57
HLA-C-204ENST00000415537 CSAG1Q6PB30 78 aa11.48□□□□□ -0.57
HLA-C-204ENST00000415537 PCP4L1A6NKN8 68 aa11.45□□□□□ -0.58
HLA-C-204ENST00000415537 SYNE2Q8WXH0 6885 aaKnown RBP11.44□□□□□ -0.58
HLA-C-204ENST00000415537 LCA10Q71F78 164 aa11.44□□□□□ -0.58
HLA-C-204ENST00000415537 CYP4F30PQ9H0H9 118 aa11.34□□□□□ -0.59
HLA-C-204ENST00000415537 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
HLA-C-204ENST00000415537 ACYP1P07311 99 aa11.31□□□□□ -0.6
HLA-C-204ENST00000415537 LOC101927531A0A1B0GV80 90 aa11.27□□□□□ -0.61
HLA-C-204ENST00000415537 Q5VV11 94 aa11.26□□□□□ -0.61
HLA-C-204ENST00000415537 SPRR2GQ9BYE4 73 aa11.24□□□□□ -0.61
HLA-C-204ENST00000415537 ATP5EP2Q5VTU8 51 aa11.23□□□□□ -0.61
HLA-C-204ENST00000415537 HIST1H4AP62805 103 aaKnown RBP11.22□□□□□ -0.61
HLA-C-204ENST00000415537 KLKP1Q107X0 134 aa11.22□□□□□ -0.61
HLA-C-204ENST00000415537 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
HLA-C-204ENST00000415537 FAM240AA0A1B0GVK7 77 aa11.2□□□□□ -0.62
HLA-C-204ENST00000415537 A6NN06 94 aa11.2□□□□□ -0.62
HLA-C-204ENST00000415537 MT1BP07438 61 aa11.2□□□□□ -0.62
HLA-C-204ENST00000415537 KRTAP6-3Q3LI67 103 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms