RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 BRK1Q8WUW1 75 aa6.88□□□□□ -1.31
RBM28-202ENST00000415472 PCOTHQ58A44 107 aa6.87□□□□□ -1.31
RBM28-202ENST00000415472 Q1T7F1 81 aa6.87□□□□□ -1.31
RBM28-202ENST00000415472 SPINK6Q6UWN8 80 aa6.87□□□□□ -1.31
RBM28-202ENST00000415472 SPANXA2-OT1Q8N9U9 137 aa6.87□□□□□ -1.31
RBM28-202ENST00000415472 CIRBP-AS1Q8TBR5 109 aa6.87□□□□□ -1.31
RBM28-202ENST00000415472 PSPHP1O15172 72 aa6.86□□□□□ -1.31
RBM28-202ENST00000415472 NDUFS5O43920 106 aa6.86□□□□□ -1.31
RBM28-202ENST00000415472 CD164Q04900 197 aa6.85□□□□□ -1.31
RBM28-202ENST00000415472 CDK2AP2O75956 126 aa6.84□□□□□ -1.31
RBM28-202ENST00000415472 MRPL34Q9BQ48 92 aaKnown RBP6.83□□□□□ -1.32
RBM28-202ENST00000415472 TP53AIP1Q9HCN2 124 aa6.83□□□□□ -1.32
RBM28-202ENST00000415472 VPS13BQ7Z7G8 4022 aa6.82□□□□□ -1.32
RBM28-202ENST00000415472 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
RBM28-202ENST00000415472 A8MUN3 132 aa6.8□□□□□ -1.32
RBM28-202ENST00000415472 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
RBM28-202ENST00000415472 Q5W150 140 aa6.8□□□□□ -1.32
RBM28-202ENST00000415472 COA5Q86WW8 74 aa6.78□□□□□ -1.32
RBM28-202ENST00000415472 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
RBM28-202ENST00000415472 PKHD1P08F94 4074 aa6.77□□□□□ -1.33
RBM28-202ENST00000415472 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
RBM28-202ENST00000415472 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
RBM28-202ENST00000415472 Q6ZSA8 131 aa6.75□□□□□ -1.33
RBM28-202ENST00000415472 A8MU10 97 aa6.74□□□□□ -1.33
RBM28-202ENST00000415472 Q5VV11 94 aa6.74□□□□□ -1.33
RBM28-202ENST00000415472 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
RBM28-202ENST00000415472 HRES1P13985 223 aa6.71□□□□□ -1.34
RBM28-202ENST00000415472 C1orf195Q5TG92 126 aa6.7□□□□□ -1.34
RBM28-202ENST00000415472 KRTAP1-4P0C5Y4 121 aa6.7□□□□□ -1.34
RBM28-202ENST00000415472 RETNLBQ9BQ08 111 aa6.7□□□□□ -1.34
RBM28-202ENST00000415472 PRR15LQ9BU68 103 aa6.7□□□□□ -1.34
RBM28-202ENST00000415472 V9GYY9 64 aa6.69□□□□□ -1.34
RBM28-202ENST00000415472 SACSQ9NZJ4 4579 aa6.68□□□□□ -1.34
RBM28-202ENST00000415472 SEC61GP60059 68 aa6.68□□□□□ -1.34
RBM28-202ENST00000415472 LOC101927531A0A1B0GV80 90 aa6.67□□□□□ -1.34
RBM28-202ENST00000415472 LINC00313P59037 77 aa6.67□□□□□ -1.34
RBM28-202ENST00000415472 LIMD2Q9BT23 127 aa6.67□□□□□ -1.34
RBM28-202ENST00000415472 SPAG11AQ6PDA7 123 aa6.66□□□□□ -1.34
RBM28-202ENST00000415472 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
RBM28-202ENST00000415472 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
RBM28-202ENST00000415472 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.35
RBM28-202ENST00000415472 KRTAP16-1A8MUX0 517 aa6.63□□□□□ -1.35
RBM28-202ENST00000415472 PRR26Q8N8Z3 221 aa6.62□□□□□ -1.35
RBM28-202ENST00000415472 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
RBM28-202ENST00000415472 PLA2G1BP04054 148 aaKnown RBP6.6□□□□□ -1.35
RBM28-202ENST00000415472 Q75L30 129 aa6.6□□□□□ -1.35
RBM28-202ENST00000415472 FAT1Q14517 4588 aa6.59□□□□□ -1.35
RBM28-202ENST00000415472 LCA10Q71F78 164 aa6.59□□□□□ -1.35
RBM28-202ENST00000415472 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.36
RBM28-202ENST00000415472 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
RBM28-202ENST00000415472 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
RBM28-202ENST00000415472 A6NED7 52 aa6.56□□□□□ -1.36
RBM28-202ENST00000415472 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
RBM28-202ENST00000415472 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
RBM28-202ENST00000415472 SPINK7P58062 85 aa6.53□□□□□ -1.36
RBM28-202ENST00000415472 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
RBM28-202ENST00000415472 ACYP2P14621 99 aa6.52□□□□□ -1.37
RBM28-202ENST00000415472 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
RBM28-202ENST00000415472 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
RBM28-202ENST00000415472 IGKV2D-30A0A075B6S6 120 aa6.52□□□□□ -1.37
RBM28-202ENST00000415472 SPINK1P00995 79 aa6.5□□□□□ -1.37
RBM28-202ENST00000415472 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
RBM28-202ENST00000415472 PKHD1L1Q86WI1 4243 aa6.49□□□□□ -1.37
RBM28-202ENST00000415472 PMAIP1Q13794 54 aa6.48□□□□□ -1.37
RBM28-202ENST00000415472 LINC00304Q8N9R0 145 aa6.47□□□□□ -1.37
RBM28-202ENST00000415472 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.37
RBM28-202ENST00000415472 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
RBM28-202ENST00000415472 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
RBM28-202ENST00000415472 RYR2Q92736 4967 aa6.43□□□□□ -1.38
RBM28-202ENST00000415472 KMT2CQ8NEZ4 4911 aaKnown RBP6.43□□□□□ -1.38
RBM28-202ENST00000415472 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
RBM28-202ENST00000415472 ATP11AUNQ6ZP68 121 aa6.42□□□□□ -1.38
RBM28-202ENST00000415472 A0A1B0GVY2 172 aa6.42□□□□□ -1.38
RBM28-202ENST00000415472 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
RBM28-202ENST00000415472 KRTAP21-3Q3LHN1 58 aa6.4□□□□□ -1.38
RBM28-202ENST00000415472 C9orf92A6NGG3 77 aa6.39□□□□□ -1.39
RBM28-202ENST00000415472 Q8N1X5 172 aa6.39□□□□□ -1.39
RBM28-202ENST00000415472 A6NN06 94 aa6.38□□□□□ -1.39
RBM28-202ENST00000415472 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
RBM28-202ENST00000415472 A0A1B0GU69 56 aa6.36□□□□□ -1.39
RBM28-202ENST00000415472 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
RBM28-202ENST00000415472 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
RBM28-202ENST00000415472 A8MUU9 505 aa6.3□□□□□ -1.4
RBM28-202ENST00000415472 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
RBM28-202ENST00000415472 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
RBM28-202ENST00000415472 TNXBP22105 4242 aa6.29□□□□□ -1.4
RBM28-202ENST00000415472 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
RBM28-202ENST00000415472 FAT3Q8TDW7 4589 aa6.27□□□□□ -1.41
RBM28-202ENST00000415472 HSPG2P98160 4391 aa6.27□□□□□ -1.41
RBM28-202ENST00000415472 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
RBM28-202ENST00000415472 MYCBP2O75592 4640 aa6.23□□□□□ -1.41
RBM28-202ENST00000415472 MIR22HGQ0VDD5 57 aa6.23□□□□□ -1.41
RBM28-202ENST00000415472 UQCR11O14957 56 aa6.22□□□□□ -1.41
RBM28-202ENST00000415472 DMBT1Q9UGM3 2413 aaPredicted RBP6.21□□□□□ -1.42
RBM28-202ENST00000415472 RYR3Q15413 4870 aa6.21□□□□□ -1.42
RBM28-202ENST00000415472 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
RBM28-202ENST00000415472 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
RBM28-202ENST00000415472 RBM12B-AS1Q9P1G2 102 aa6.17□□□□□ -1.42
RBM28-202ENST00000415472 PRAC1Q96KF2 57 aa6.15□□□□□ -1.43
RBM28-202ENST00000415472 RYR1P21817 5038 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms