RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 A8MWP4 228 aa5.41□□□□□ -1.54
RIF1-202ENST00000414861 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
RIF1-202ENST00000414861 PRR15Q8IV56 129 aa5.39□□□□□ -1.55
RIF1-202ENST00000414861 IGHV6-1A0A0B4J1U7 121 aa5.38□□□□□ -1.55
RIF1-202ENST00000414861 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
RIF1-202ENST00000414861 A0A087WVE0 104 aa5.38□□□□□ -1.55
RIF1-202ENST00000414861 HIST1H4AP62805 103 aaKnown RBP5.37□□□□□ -1.55
RIF1-202ENST00000414861 NDUFB1O75438 58 aa5.36□□□□□ -1.55
RIF1-202ENST00000414861 PRR4Q16378 134 aa5.36□□□□□ -1.55
RIF1-202ENST00000414861 FP248Q71RG6 208 aaPredicted RBP5.36□□□□□ -1.55
RIF1-202ENST00000414861 IGLV7-46A0A075B6I9 117 aa5.35□□□□□ -1.55
RIF1-202ENST00000414861 MMP24-AS1A0A0U1RRL7 71 aa5.35□□□□□ -1.55
RIF1-202ENST00000414861 C8orf17Q9NRJ1 99 aa5.34□□□□□ -1.55
RIF1-202ENST00000414861 C9orf92A6NGG3 77 aa5.34□□□□□ -1.56
RIF1-202ENST00000414861 LPAP08519 4548 aa5.33□□□□□ -1.56
RIF1-202ENST00000414861 WFDC13Q8IUB5 93 aa5.33□□□□□ -1.56
RIF1-202ENST00000414861 IMUPQ9GZP8 106 aa5.32□□□□□ -1.56
RIF1-202ENST00000414861 HCG22E2RYF7 251 aa5.32□□□□□ -1.56
RIF1-202ENST00000414861 LINC00313P59037 77 aa5.32□□□□□ -1.56
RIF1-202ENST00000414861 KRTAP13-3Q3SY46 172 aa5.32□□□□□ -1.56
RIF1-202ENST00000414861 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
RIF1-202ENST00000414861 KRTAP16-1A8MUX0 517 aa5.31□□□□□ -1.56
RIF1-202ENST00000414861 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
RIF1-202ENST00000414861 hDV103S1A0JD37 113 aa5.3□□□□□ -1.56
RIF1-202ENST00000414861 CASC2Q6XLA1 102 aa5.3□□□□□ -1.56
RIF1-202ENST00000414861 LRP2P98164 4655 aa5.29□□□□□ -1.56
RIF1-202ENST00000414861 FAM236AA0A1B0GUQ0 79 aa5.28□□□□□ -1.56
RIF1-202ENST00000414861 FAM236BA0A1B0GV22 79 aa5.28□□□□□ -1.56
RIF1-202ENST00000414861 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
RIF1-202ENST00000414861 TMEM254Q8TBM7 123 aa5.27□□□□□ -1.57
RIF1-202ENST00000414861 MRPL34Q9BQ48 92 aaKnown RBP5.26□□□□□ -1.57
RIF1-202ENST00000414861 XP32Q5T750 250 aa5.26□□□□□ -1.57
RIF1-202ENST00000414861 Q8N9P0 234 aaPredicted RBP5.24□□□□□ -1.57
RIF1-202ENST00000414861 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
RIF1-202ENST00000414861 NDUFS5O43920 106 aa5.22□□□□□ -1.57
RIF1-202ENST00000414861 A8MUU9 505 aa5.22□□□□□ -1.57
RIF1-202ENST00000414861 SCGB1A1P11684 91 aa5.21□□□□□ -1.58
RIF1-202ENST00000414861 Q75L30 129 aa5.2□□□□□ -1.58
RIF1-202ENST00000414861 OCR1Q9BZK8 76 aa5.2□□□□□ -1.58
RIF1-202ENST00000414861 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
RIF1-202ENST00000414861 ATOX1O00244 68 aa5.18□□□□□ -1.58
RIF1-202ENST00000414861 Q5W150 140 aa5.17□□□□□ -1.58
RIF1-202ENST00000414861 TP53AIP1Q9HCN2 124 aa5.15□□□□□ -1.58
RIF1-202ENST00000414861 ZCCHC13Q8WW36 166 aaKnown RBP5.15□□□□□ -1.59
RIF1-202ENST00000414861 UQCRQO14949 82 aa5.14□□□□□ -1.59
RIF1-202ENST00000414861 TRAV7A0A075B6U4 112 aa5.13□□□□□ -1.59
RIF1-202ENST00000414861 TRAV22A0A0B4J277 110 aa5.13□□□□□ -1.59
RIF1-202ENST00000414861 PCOTHQ58A44 107 aa5.13□□□□□ -1.59
RIF1-202ENST00000414861 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
RIF1-202ENST00000414861 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
RIF1-202ENST00000414861 ATP11AUNQ6ZP68 121 aa5.12□□□□□ -1.59
RIF1-202ENST00000414861 SERP2Q8N6R1 65 aa5.12□□□□□ -1.59
RIF1-202ENST00000414861 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
RIF1-202ENST00000414861 ANAPC13Q9BS18 74 aa5.11□□□□□ -1.59
RIF1-202ENST00000414861 H0Y9P7 68 aa5.11□□□□□ -1.59
RIF1-202ENST00000414861 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
RIF1-202ENST00000414861 C5orf47Q569G3 176 aa5.07□□□□□ -1.6
RIF1-202ENST00000414861 COX7CP15954 63 aa5.07□□□□□ -1.6
RIF1-202ENST00000414861 MP68P56378 58 aa5.06□□□□□ -1.6
RIF1-202ENST00000414861 LINC00208Q96KT6 92 aa5.06□□□□□ -1.6
RIF1-202ENST00000414861 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
RIF1-202ENST00000414861 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
RIF1-202ENST00000414861 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
RIF1-202ENST00000414861 C20orf197Q8N268 126 aa5.05□□□□□ -1.6
RIF1-202ENST00000414861 C1orf64Q8NEQ6 169 aa5.05□□□□□ -1.6
RIF1-202ENST00000414861 MUC2Q02817 5179 aa5.05□□□□□ -1.6
RIF1-202ENST00000414861 SNURFQ9Y675 71 aa5.04□□□□□ -1.6
RIF1-202ENST00000414861 A0A0U1RQV1 116 aa5.04□□□□□ -1.6
RIF1-202ENST00000414861 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
RIF1-202ENST00000414861 SPINK7P58062 85 aa5.03□□□□□ -1.6
RIF1-202ENST00000414861 CCDC179H3BU77 68 aa5.03□□□□□ -1.6
RIF1-202ENST00000414861 LOC101927531A0A1B0GV80 90 aa5.02□□□□□ -1.61
RIF1-202ENST00000414861 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
RIF1-202ENST00000414861 CYP4F30PQ9H0H9 118 aa5.02□□□□□ -1.61
RIF1-202ENST00000414861 H3BPC8 53 aa5.01□□□□□ -1.61
RIF1-202ENST00000414861 CYSTM1Q9H1C7 97 aa5.01□□□□□ -1.61
RIF1-202ENST00000414861 KLKP1Q107X0 134 aa5□□□□□ -1.61
RIF1-202ENST00000414861 PCP4P48539 62 aa4.99□□□□□ -1.61
RIF1-202ENST00000414861 HRES1P13985 223 aa4.97□□□□□ -1.61
RIF1-202ENST00000414861 C4orf26Q17RF5 130 aa4.94□□□□□ -1.62
RIF1-202ENST00000414861 H7BZZ5 65 aa4.93□□□□□ -1.62
RIF1-202ENST00000414861 MPLKIPQ8TAP9 179 aa4.93□□□□□ -1.62
RIF1-202ENST00000414861 NDUFC1O43677 76 aa4.89□□□□□ -1.63
RIF1-202ENST00000414861 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
RIF1-202ENST00000414861 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
RIF1-202ENST00000414861 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
RIF1-202ENST00000414861 RBM12B-AS1Q9P1G2 102 aa4.86□□□□□ -1.63
RIF1-202ENST00000414861 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
RIF1-202ENST00000414861 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
RIF1-202ENST00000414861 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.64
RIF1-202ENST00000414861 FAM236DA0A1B0GTK5 79 aa4.84□□□□□ -1.64
RIF1-202ENST00000414861 FAM236CP0DP71 79 aa4.84□□□□□ -1.64
RIF1-202ENST00000414861 DMAC1Q96GE9 116 aa4.84□□□□□ -1.64
RIF1-202ENST00000414861 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
RIF1-202ENST00000414861 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
RIF1-202ENST00000414861 TMEM258P61165 79 aa4.81□□□□□ -1.64
RIF1-202ENST00000414861 A8MUN3 132 aa4.79□□□□□ -1.64
RIF1-202ENST00000414861 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
RIF1-202ENST00000414861 KRTAP3-3Q9BYR6 98 aa4.78□□□□□ -1.64
RIF1-202ENST00000414861 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms