RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SPEGQ15772 3267 aa10.03□□□□□ -0.8
SHANK3-202ENST00000414786 ZNF292O60281 2723 aa10.02□□□□□ -0.81
SHANK3-202ENST00000414786 VCANP13611 3396 aa10□□□□□ -0.81
SHANK3-202ENST00000414786 ITPR2Q14571 2701 aa10□□□□□ -0.81
SHANK3-202ENST00000414786 KRTAP7-1Q8IUC3 87 aa9.98□□□□□ -0.81
SHANK3-202ENST00000414786 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.81
SHANK3-202ENST00000414786 COL12A1Q99715 3063 aa9.95□□□□□ -0.82
SHANK3-202ENST00000414786 UBR5O95071 2799 aaPredicted RBP9.91□□□□□ -0.82
SHANK3-202ENST00000414786 IGSF10Q6WRI0 2623 aa9.9□□□□□ -0.82
SHANK3-202ENST00000414786 LRBAP50851 2863 aa9.88□□□□□ -0.83
SHANK3-202ENST00000414786 XP32Q5T750 250 aa9.87□□□□□ -0.83
SHANK3-202ENST00000414786 PRO2289Q9P1D8 64 aa9.86□□□□□ -0.83
SHANK3-202ENST00000414786 UTP20O75691 2785 aaKnown RBP9.85□□□□□ -0.83
SHANK3-202ENST00000414786 LAMA1P25391 3075 aa9.85□□□□□ -0.83
SHANK3-202ENST00000414786 ITPR1Q14643 2758 aa9.83□□□□□ -0.84
SHANK3-202ENST00000414786 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
SHANK3-202ENST00000414786 FRYLO94915 3013 aa9.79□□□□□ -0.84
SHANK3-202ENST00000414786 HIVEP1P15822 2718 aa9.78□□□□□ -0.84
SHANK3-202ENST00000414786 ATMQ13315 3056 aa9.78□□□□□ -0.84
SHANK3-202ENST00000414786 TACC2O95359 2948 aa9.77□□□□□ -0.84
SHANK3-202ENST00000414786 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.86
SHANK3-202ENST00000414786 CHD9Q3L8U1 2897 aa9.69□□□□□ -0.86
SHANK3-202ENST00000414786 PP632Q6XCG6 107 aa9.65□□□□□ -0.86
SHANK3-202ENST00000414786 ZZEF1O43149 2961 aa9.62□□□□□ -0.87
SHANK3-202ENST00000414786 NBEAQ8NFP9 2946 aa9.61□□□□□ -0.87
SHANK3-202ENST00000414786 ADGRG4Q8IZF6 3080 aa9.61□□□□□ -0.87
SHANK3-202ENST00000414786 H0YAA0 97 aa9.57□□□□□ -0.88
SHANK3-202ENST00000414786 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
SHANK3-202ENST00000414786 USP34Q70CQ2 3546 aa9.53□□□□□ -0.88
SHANK3-202ENST00000414786 MYO15AQ9UKN7 3530 aa9.51□□□□□ -0.89
SHANK3-202ENST00000414786 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
SHANK3-202ENST00000414786 SPTBN5Q9NRC6 3674 aaKnown RBP9.5□□□□□ -0.89
SHANK3-202ENST00000414786 CRCT1Q9UGL9 99 aa9.5□□□□□ -0.89
SHANK3-202ENST00000414786 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.9
SHANK3-202ENST00000414786 TPRXLQ17RH7 258 aa9.46□□□□□ -0.9
SHANK3-202ENST00000414786 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
SHANK3-202ENST00000414786 DMXL1Q9Y485 3027 aa9.42□□□□□ -0.9
SHANK3-202ENST00000414786 ASPMQ8IZT6 3477 aa9.4□□□□□ -0.91
SHANK3-202ENST00000414786 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
SHANK3-202ENST00000414786 WDFY3Q8IZQ1 3526 aa9.38□□□□□ -0.91
SHANK3-202ENST00000414786 LOC400499M0QZD8 3231 aa9.36□□□□□ -0.91
SHANK3-202ENST00000414786 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
SHANK3-202ENST00000414786 CELSR1Q9NYQ6 3014 aa9.31□□□□□ -0.92
SHANK3-202ENST00000414786 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
SHANK3-202ENST00000414786 DCHS2Q6V1P9 2916 aa9.29□□□□□ -0.92
SHANK3-202ENST00000414786 FLNCQ14315 2725 aa9.28□□□□□ -0.92
SHANK3-202ENST00000414786 KRTAP21-3Q3LHN1 58 aa9.27□□□□□ -0.93
SHANK3-202ENST00000414786 ZFHX4Q86UP3 3567 aa9.26□□□□□ -0.93
SHANK3-202ENST00000414786 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
SHANK3-202ENST00000414786 NF1P21359 2839 aa9.23□□□□□ -0.93
SHANK3-202ENST00000414786 KRTAP15-1Q3LI76 137 aa9.19□□□□□ -0.94
SHANK3-202ENST00000414786 TENM4Q6N022 2769 aa9.18□□□□□ -0.94
SHANK3-202ENST00000414786 TGP01266 2768 aa9.15□□□□□ -0.94
SHANK3-202ENST00000414786 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
SHANK3-202ENST00000414786 TENM3Q9P273 2699 aa9.09□□□□□ -0.95
SHANK3-202ENST00000414786 PDZD2O15018 2839 aa9.04□□□□□ -0.96
SHANK3-202ENST00000414786 FBN2P35556 2912 aa9.03□□□□□ -0.96
SHANK3-202ENST00000414786 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
SHANK3-202ENST00000414786 LAMA5O15230 3695 aa8.96□□□□□ -0.97
SHANK3-202ENST00000414786 NBPF19A0A087WUL8 3843 aa8.96□□□□□ -0.97
SHANK3-202ENST00000414786 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
SHANK3-202ENST00000414786 PKD1L1Q8TDX9 2849 aa8.95□□□□□ -0.98
SHANK3-202ENST00000414786 VWFP04275 2813 aa8.94□□□□□ -0.98
SHANK3-202ENST00000414786 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.98
SHANK3-202ENST00000414786 ZANQ9Y493 2812 aa8.88□□□□□ -0.99
SHANK3-202ENST00000414786 KRTAP12-1P59990 96 aa8.79□□□□□ -1
SHANK3-202ENST00000414786 RELNP78509 3460 aa8.76□□□□□ -1.01
SHANK3-202ENST00000414786 DMDP11532 3685 aa8.66□□□□□ -1.02
SHANK3-202ENST00000414786 CUBNO60494 3623 aa8.64□□□□□ -1.03
SHANK3-202ENST00000414786 MXRA5Q9NR99 2828 aa8.62□□□□□ -1.03
SHANK3-202ENST00000414786 HRNRQ86YZ3 2850 aaPredicted RBP8.61□□□□□ -1.03
SHANK3-202ENST00000414786 SMG1Q96Q15 3661 aaKnown RBP8.61□□□□□ -1.03
SHANK3-202ENST00000414786 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
SHANK3-202ENST00000414786 SPENQ96T58 3664 aaKnown RBP8.49□□□□□ -1.05
SHANK3-202ENST00000414786 KRTAP10-12P60413 245 aa8.48□□□□□ -1.05
SHANK3-202ENST00000414786 SRRM2Q9UQ35 2752 aaKnown RBP8.45□□□□□ -1.06
SHANK3-202ENST00000414786 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
SHANK3-202ENST00000414786 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
SHANK3-202ENST00000414786 SVEP1Q4LDE5 3571 aa8.39□□□□□ -1.07
SHANK3-202ENST00000414786 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
SHANK3-202ENST00000414786 COL7A1Q02388 2944 aa8.37□□□□□ -1.07
SHANK3-202ENST00000414786 MEGF8Q7Z7M0 2845 aa8.3□□□□□ -1.08
SHANK3-202ENST00000414786 MUC3AQ02505 3323 aa8.28□□□□□ -1.08
SHANK3-202ENST00000414786 KRTAP4-5Q9BYR2 181 aa8.26□□□□□ -1.09
SHANK3-202ENST00000414786 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
SHANK3-202ENST00000414786 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
SHANK3-202ENST00000414786 INE1O15225 51 aa8.16□□□□□ -1.1
SHANK3-202ENST00000414786 LCE3AQ5TA76 89 aa8.14□□□□□ -1.11
SHANK3-202ENST00000414786 KRTAP12-3P60328 96 aa8.14□□□□□ -1.11
SHANK3-202ENST00000414786 KRTAP8-1Q8IUC2 63 aa8.11□□□□□ -1.11
SHANK3-202ENST00000414786 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
SHANK3-202ENST00000414786 CSMD2Q7Z408 3487 aa8.09□□□□□ -1.11
SHANK3-202ENST00000414786 CSMD3Q7Z407 3707 aa8.01□□□□□ -1.13
SHANK3-202ENST00000414786 TRRAPQ9Y4A5 3859 aa7.97□□□□□ -1.13
SHANK3-202ENST00000414786 MT1HL1P0DM35 61 aa7.96□□□□□ -1.13
SHANK3-202ENST00000414786 BSNQ9UPA5 3926 aa7.94□□□□□ -1.14
SHANK3-202ENST00000414786 VPS13CQ709C8 3753 aa7.87□□□□□ -1.15
SHANK3-202ENST00000414786 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
SHANK3-202ENST00000414786 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
SHANK3-202ENST00000414786 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 771.7 ms