RNA–Protein interactions for RNA: ENST00000413539.6

DYSF-210, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-210ENST00000413539 MAP1AP78559 2803 aaPredicted RBP7.86□□□□□ -1.15
DYSF-210ENST00000413539 CRYBG3Q68DQ2 2970 aa7.85□□□□□ -1.15
DYSF-210ENST00000413539 SPEGQ15772 3267 aa7.85□□□□□ -1.15
DYSF-210ENST00000413539 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
DYSF-210ENST00000413539 DMXL2Q8TDJ6 3036 aa7.83□□□□□ -1.16
DYSF-210ENST00000413539 DSPP15924 2871 aaKnown RBP7.83□□□□□ -1.16
DYSF-210ENST00000413539 ITPR2Q14571 2701 aa7.82□□□□□ -1.16
DYSF-210ENST00000413539 ASH1LQ9NR48 2969 aaKnown RBP7.82□□□□□ -1.16
DYSF-210ENST00000413539 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
DYSF-210ENST00000413539 ZNF292O60281 2723 aa7.8□□□□□ -1.16
DYSF-210ENST00000413539 BAHCC1Q9P281 2608 aa7.78□□□□□ -1.16
DYSF-210ENST00000413539 NSD1Q96L73 2696 aaPredicted RBP7.72□□□□□ -1.17
DYSF-210ENST00000413539 BOD1L1Q8NFC6 3051 aa7.71□□□□□ -1.17
DYSF-210ENST00000413539 UBR5O95071 2799 aaPredicted RBP7.7□□□□□ -1.18
DYSF-210ENST00000413539 ITPR1Q14643 2758 aa7.69□□□□□ -1.18
DYSF-210ENST00000413539 HIVEP1P15822 2718 aa7.68□□□□□ -1.18
DYSF-210ENST00000413539 FRYLO94915 3013 aa7.68□□□□□ -1.18
DYSF-210ENST00000413539 KMT2BQ9UMN6 2715 aaPredicted RBP7.67□□□□□ -1.18
DYSF-210ENST00000413539 UTP20O75691 2785 aaKnown RBP7.67□□□□□ -1.18
DYSF-210ENST00000413539 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
DYSF-210ENST00000413539 COL12A1Q99715 3063 aa7.64□□□□□ -1.19
DYSF-210ENST00000413539 TACC2O95359 2948 aa7.64□□□□□ -1.19
DYSF-210ENST00000413539 USP34Q70CQ2 3546 aa7.63□□□□□ -1.19
DYSF-210ENST00000413539 NBEAQ8NFP9 2946 aa7.63□□□□□ -1.19
DYSF-210ENST00000413539 SPTBN5Q9NRC6 3674 aaKnown RBP7.62□□□□□ -1.19
DYSF-210ENST00000413539 ADGRG4Q8IZF6 3080 aa7.62□□□□□ -1.19
DYSF-210ENST00000413539 TPRXLQ17RH7 258 aa7.61□□□□□ -1.19
DYSF-210ENST00000413539 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
DYSF-210ENST00000413539 ZZEF1O43149 2961 aa7.6□□□□□ -1.19
DYSF-210ENST00000413539 ATMQ13315 3056 aa7.59□□□□□ -1.19
DYSF-210ENST00000413539 IGSF10Q6WRI0 2623 aa7.58□□□□□ -1.2
DYSF-210ENST00000413539 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
DYSF-210ENST00000413539 DCHS1Q96JQ0 3298 aa7.51□□□□□ -1.21
DYSF-210ENST00000413539 MYO15AQ9UKN7 3530 aa7.47□□□□□ -1.21
DYSF-210ENST00000413539 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
DYSF-210ENST00000413539 WDFY3Q8IZQ1 3526 aa7.41□□□□□ -1.22
DYSF-210ENST00000413539 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
DYSF-210ENST00000413539 LOC400499M0QZD8 3231 aa7.4□□□□□ -1.22
DYSF-210ENST00000413539 TNRC18O15417 2968 aaPredicted RBP7.37□□□□□ -1.23
DYSF-210ENST00000413539 EYSQ5T1H1 3165 aa7.35□□□□□ -1.23
DYSF-210ENST00000413539 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
DYSF-210ENST00000413539 KRTAP21-3Q3LHN1 58 aa7.34□□□□□ -1.24
DYSF-210ENST00000413539 KRTAP12-1P59990 96 aa7.33□□□□□ -1.24
DYSF-210ENST00000413539 DMXL1Q9Y485 3027 aa7.31□□□□□ -1.24
DYSF-210ENST00000413539 CSMD1Q96PZ7 3565 aa7.28□□□□□ -1.24
DYSF-210ENST00000413539 DCHS2Q6V1P9 2916 aa7.27□□□□□ -1.25
DYSF-210ENST00000413539 KRTAP15-1Q3LI76 137 aa7.26□□□□□ -1.25
DYSF-210ENST00000413539 TGP01266 2768 aa7.26□□□□□ -1.25
DYSF-210ENST00000413539 CELSR1Q9NYQ6 3014 aa7.21□□□□□ -1.25
DYSF-210ENST00000413539 ZFHX4Q86UP3 3567 aa7.18□□□□□ -1.26
DYSF-210ENST00000413539 NBPF19A0A087WUL8 3843 aa7.15□□□□□ -1.26
DYSF-210ENST00000413539 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.27
DYSF-210ENST00000413539 LAMA5O15230 3695 aa7.14□□□□□ -1.27
DYSF-210ENST00000413539 TENM4Q6N022 2769 aa7.13□□□□□ -1.27
DYSF-210ENST00000413539 TENM1Q9UKZ4 2725 aa7.13□□□□□ -1.27
DYSF-210ENST00000413539 FBN2P35556 2912 aa7.12□□□□□ -1.27
DYSF-210ENST00000413539 FLNCQ14315 2725 aa7.11□□□□□ -1.27
DYSF-210ENST00000413539 HRNRQ86YZ3 2850 aaPredicted RBP7.1□□□□□ -1.27
DYSF-210ENST00000413539 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
DYSF-210ENST00000413539 RELNP78509 3460 aa7.08□□□□□ -1.28
DYSF-210ENST00000413539 NF1P21359 2839 aa7.07□□□□□ -1.28
DYSF-210ENST00000413539 TENM2Q9NT68 2774 aa7.07□□□□□ -1.28
DYSF-210ENST00000413539 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
DYSF-210ENST00000413539 NIPBLQ6KC79 2804 aaeCLIP7.02□□□□□ -1.29
DYSF-210ENST00000413539 KRTAP10-6P60371 365 aaPredicted RBP6.94□□□□□ -1.3
DYSF-210ENST00000413539 TENM3Q9P273 2699 aa6.92□□□□□ -1.3
DYSF-210ENST00000413539 SMG1Q96Q15 3661 aaKnown RBP6.88□□□□□ -1.31
DYSF-210ENST00000413539 MXRA5Q9NR99 2828 aa6.85□□□□□ -1.31
DYSF-210ENST00000413539 PDZD2O15018 2839 aa6.81□□□□□ -1.32
DYSF-210ENST00000413539 VWFP04275 2813 aa6.8□□□□□ -1.32
DYSF-210ENST00000413539 INE1O15225 51 aa6.79□□□□□ -1.32
DYSF-210ENST00000413539 SVEP1Q4LDE5 3571 aa6.79□□□□□ -1.32
DYSF-210ENST00000413539 SPENQ96T58 3664 aaKnown RBP6.78□□□□□ -1.32
DYSF-210ENST00000413539 PKD1L1Q8TDX9 2849 aa6.77□□□□□ -1.33
DYSF-210ENST00000413539 KRTAP10-12P60413 245 aa6.76□□□□□ -1.33
DYSF-210ENST00000413539 DMDP11532 3685 aa6.75□□□□□ -1.33
DYSF-210ENST00000413539 CUBNO60494 3623 aa6.71□□□□□ -1.33
DYSF-210ENST00000413539 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.35
DYSF-210ENST00000413539 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.35
DYSF-210ENST00000413539 ANK3Q12955 4377 aaKnown RBP6.59□□□□□ -1.35
DYSF-210ENST00000413539 LCE3AQ5TA76 89 aa6.59□□□□□ -1.36
DYSF-210ENST00000413539 ZFHX3Q15911 3703 aa6.58□□□□□ -1.36
DYSF-210ENST00000413539 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
DYSF-210ENST00000413539 CSMD2Q7Z408 3487 aa6.52□□□□□ -1.37
DYSF-210ENST00000413539 MEGF8Q7Z7M0 2845 aa6.52□□□□□ -1.37
DYSF-210ENST00000413539 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
DYSF-210ENST00000413539 FBN3Q75N90 2809 aa6.46□□□□□ -1.37
DYSF-210ENST00000413539 KRTAP10-5P60370 271 aa6.46□□□□□ -1.37
DYSF-210ENST00000413539 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
DYSF-210ENST00000413539 TRRAPQ9Y4A5 3859 aa6.44□□□□□ -1.38
DYSF-210ENST00000413539 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
DYSF-210ENST00000413539 LORP23490 312 aaPredicted RBP6.43□□□□□ -1.38
DYSF-210ENST00000413539 MUC3AQ02505 3323 aa6.41□□□□□ -1.38
DYSF-210ENST00000413539 VPS13CQ709C8 3753 aa6.41□□□□□ -1.38
DYSF-210ENST00000413539 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
DYSF-210ENST00000413539 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
DYSF-210ENST00000413539 COL7A1Q02388 2944 aa6.34□□□□□ -1.39
DYSF-210ENST00000413539 FBN1P35555 2871 aaKnown RBP6.31□□□□□ -1.4
DYSF-210ENST00000413539 BSNQ9UPA5 3926 aa6.29□□□□□ -1.4
DYSF-210ENST00000413539 KRTAP8-1Q8IUC2 63 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 762.3 ms