RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 A8MWP4 228 aa14.3□□□□□ -0.12
RHBDD3-203ENST00000413137 KRTAP13-3Q3SY46 172 aa14.3□□□□□ -0.12
RHBDD3-203ENST00000413137 Q8N9L7 120 aa14.3□□□□□ -0.12
RHBDD3-203ENST00000413137 NOTCH2NLQ7Z3S9 236 aa14.29□□□□□ -0.12
RHBDD3-203ENST00000413137 IGHV6-1A0A0B4J1U7 121 aa14.28□□□□□ -0.12
RHBDD3-203ENST00000413137 K7EQZ3 153 aa14.28□□□□□ -0.12
RHBDD3-203ENST00000413137 A0A1B0GVX0 72 aa14.27□□□□□ -0.12
RHBDD3-203ENST00000413137 TPRXLQ17RH7 258 aa14.24□□□□□ -0.13
RHBDD3-203ENST00000413137 LINC00643Q86TS7 51 aa14.24□□□□□ -0.13
RHBDD3-203ENST00000413137 PRR15Q8IV56 129 aa14.24□□□□□ -0.13
RHBDD3-203ENST00000413137 NDUFB1O75438 58 aa14.23□□□□□ -0.13
RHBDD3-203ENST00000413137 CXCL6P80162 114 aa14.22□□□□□ -0.13
RHBDD3-203ENST00000413137 LRP2P98164 4655 aa14.2□□□□□ -0.14
RHBDD3-203ENST00000413137 LINC00313P59037 77 aa14.17□□□□□ -0.14
RHBDD3-203ENST00000413137 ATP5EP2Q5VTU8 51 aa14.16□□□□□ -0.14
RHBDD3-203ENST00000413137 C8orf17Q9NRJ1 99 aa14.14□□□□□ -0.15
RHBDD3-203ENST00000413137 XP32Q5T750 250 aa14.12□□□□□ -0.15
RHBDD3-203ENST00000413137 MMP24-AS1A0A0U1RRL7 71 aa14.11□□□□□ -0.15
RHBDD3-203ENST00000413137 KRTAP16-1A8MUX0 517 aa14.11□□□□□ -0.15
RHBDD3-203ENST00000413137 C8orf87E5RJ46 101 aa14.11□□□□□ -0.15
RHBDD3-203ENST00000413137 MT-ATP8P03928 68 aa14.05□□□□□ -0.16
RHBDD3-203ENST00000413137 HIST1H4AP62805 103 aaKnown RBP14.05□□□□□ -0.16
RHBDD3-203ENST00000413137 WFDC13Q8IUB5 93 aa14.02□□□□□ -0.16
RHBDD3-203ENST00000413137 A0A087WVE0 104 aa14□□□□□ -0.17
RHBDD3-203ENST00000413137 hDV103S1A0JD37 113 aa14□□□□□ -0.17
RHBDD3-203ENST00000413137 HCG22E2RYF7 251 aa13.98□□□□□ -0.17
RHBDD3-203ENST00000413137 CASC2Q6XLA1 102 aa13.97□□□□□ -0.17
RHBDD3-203ENST00000413137 C20orf166-AS1Q96NR2 134 aa13.96□□□□□ -0.17
RHBDD3-203ENST00000413137 A8MUU9 505 aa13.95□□□□□ -0.18
RHBDD3-203ENST00000413137 TMEM254Q8TBM7 123 aa13.95□□□□□ -0.18
RHBDD3-203ENST00000413137 MRPL34Q9BQ48 92 aaKnown RBP13.93□□□□□ -0.18
RHBDD3-203ENST00000413137 Q75L30 129 aa13.92□□□□□ -0.18
RHBDD3-203ENST00000413137 RPL37P61927 97 aaKnown RBP13.92□□□□□ -0.18
RHBDD3-203ENST00000413137 Q8N9P0 234 aaPredicted RBP13.91□□□□□ -0.18
RHBDD3-203ENST00000413137 UBR4Q5T4S7 5183 aa13.9□□□□□ -0.18
RHBDD3-203ENST00000413137 MUC17Q685J3 4493 aa13.87□□□□□ -0.19
RHBDD3-203ENST00000413137 IMUPQ9GZP8 106 aa13.83□□□□□ -0.19
RHBDD3-203ENST00000413137 NDUFS5O43920 106 aa13.82□□□□□ -0.2
RHBDD3-203ENST00000413137 PCOTHQ58A44 107 aa13.8□□□□□ -0.2
RHBDD3-203ENST00000413137 SEC61BP60468 96 aaKnown RBP13.75□□□□□ -0.21
RHBDD3-203ENST00000413137 ATP11AUNQ6ZP68 121 aa13.75□□□□□ -0.21
RHBDD3-203ENST00000413137 ZCCHC13Q8WW36 166 aaKnown RBP13.7□□□□□ -0.22
RHBDD3-203ENST00000413137 Q5W150 140 aa13.68□□□□□ -0.22
RHBDD3-203ENST00000413137 RNF213Q63HN8 5207 aa13.67□□□□□ -0.22
RHBDD3-203ENST00000413137 FAM236AA0A1B0GUQ0 79 aa13.66□□□□□ -0.22
RHBDD3-203ENST00000413137 FAM236BA0A1B0GV22 79 aa13.66□□□□□ -0.22
RHBDD3-203ENST00000413137 KRTAP4-1Q9BYQ7 146 aa13.66□□□□□ -0.22
RHBDD3-203ENST00000413137 MUC2Q02817 5179 aa13.64□□□□□ -0.23
RHBDD3-203ENST00000413137 TP53AIP1Q9HCN2 124 aa13.6□□□□□ -0.23
RHBDD3-203ENST00000413137 SCGB1A1P11684 91 aa13.59□□□□□ -0.23
RHBDD3-203ENST00000413137 OCR1Q9BZK8 76 aa13.58□□□□□ -0.23
RHBDD3-203ENST00000413137 UQCRQO14949 82 aa13.51□□□□□ -0.25
RHBDD3-203ENST00000413137 TRAV22A0A0B4J277 110 aa13.45□□□□□ -0.26
RHBDD3-203ENST00000413137 SPINK7P58062 85 aa13.44□□□□□ -0.26
RHBDD3-203ENST00000413137 ATOX1O00244 68 aa13.41□□□□□ -0.26
RHBDD3-203ENST00000413137 H0Y9P7 68 aa13.41□□□□□ -0.26
RHBDD3-203ENST00000413137 IGKV2D-30A0A075B6S6 120 aa13.4□□□□□ -0.26
RHBDD3-203ENST00000413137 IGKV2-30P06310 120 aa13.4□□□□□ -0.26
RHBDD3-203ENST00000413137 TRAV7A0A075B6U4 112 aa13.37□□□□□ -0.27
RHBDD3-203ENST00000413137 SMIM20Q8N5G0 67 aa13.35□□□□□ -0.27
RHBDD3-203ENST00000413137 C5orf47Q569G3 176 aa13.33□□□□□ -0.28
RHBDD3-203ENST00000413137 C7orf65Q6ZTY9 151 aa13.32□□□□□ -0.28
RHBDD3-203ENST00000413137 HRES1P13985 223 aa13.3□□□□□ -0.28
RHBDD3-203ENST00000413137 LINC00208Q96KT6 92 aa13.29□□□□□ -0.28
RHBDD3-203ENST00000413137 MP68P56378 58 aa13.28□□□□□ -0.28
RHBDD3-203ENST00000413137 C1orf64Q8NEQ6 169 aa13.28□□□□□ -0.28
RHBDD3-203ENST00000413137 SERP2Q8N6R1 65 aa13.26□□□□□ -0.29
RHBDD3-203ENST00000413137 CYP4F30PQ9H0H9 118 aa13.26□□□□□ -0.29
RHBDD3-203ENST00000413137 LOC101927531A0A1B0GV80 90 aa13.24□□□□□ -0.29
RHBDD3-203ENST00000413137 KRTAP19-2Q3LHN2 52 aa13.2□□□□□ -0.3
RHBDD3-203ENST00000413137 MPLKIPQ8TAP9 179 aa13.2□□□□□ -0.3
RHBDD3-203ENST00000413137 H3BPC8 53 aa13.16□□□□□ -0.3
RHBDD3-203ENST00000413137 KLKP1Q107X0 134 aa13.15□□□□□ -0.3
RHBDD3-203ENST00000413137 A0A0U1RQV1 116 aa13.14□□□□□ -0.31
RHBDD3-203ENST00000413137 ANAPC13Q9BS18 74 aa13.14□□□□□ -0.31
RHBDD3-203ENST00000413137 FAT4Q6V0I7 4981 aa13.12□□□□□ -0.31
RHBDD3-203ENST00000413137 COX7CP15954 63 aa13.11□□□□□ -0.31
RHBDD3-203ENST00000413137 C4orf26Q17RF5 130 aa13.11□□□□□ -0.31
RHBDD3-203ENST00000413137 SNURFQ9Y675 71 aa13.11□□□□□ -0.31
RHBDD3-203ENST00000413137 C20orf197Q8N268 126 aa13.1□□□□□ -0.31
RHBDD3-203ENST00000413137 LCE2CQ5TA81 110 aa13.08□□□□□ -0.32
RHBDD3-203ENST00000413137 RBM12B-AS1Q9P1G2 102 aa13.07□□□□□ -0.32
RHBDD3-203ENST00000413137 COX6B2Q6YFQ2 88 aa13.01□□□□□ -0.33
RHBDD3-203ENST00000413137 FAM236DA0A1B0GTK5 79 aa12.99□□□□□ -0.33
RHBDD3-203ENST00000413137 FAM236CP0DP71 79 aa12.99□□□□□ -0.33
RHBDD3-203ENST00000413137 KRTAP3-1Q9BYR8 98 aa12.98□□□□□ -0.33
RHBDD3-203ENST00000413137 FLGP20930 4061 aaPredicted RBP12.95□□□□□ -0.34
RHBDD3-203ENST00000413137 CCDC179H3BU77 68 aa12.93□□□□□ -0.34
RHBDD3-203ENST00000413137 CYSTM1Q9H1C7 97 aa12.93□□□□□ -0.34
RHBDD3-203ENST00000413137 MT1HP80294 61 aa12.82□□□□□ -0.36
RHBDD3-203ENST00000413137 H1FX-AS1Q4G0G2 97 aa12.82□□□□□ -0.36
RHBDD3-203ENST00000413137 H7BZZ5 65 aa12.75□□□□□ -0.37
RHBDD3-203ENST00000413137 LCE2AQ5TA79 106 aaPredicted RBP12.71□□□□□ -0.37
RHBDD3-203ENST00000413137 NDUFC1O43677 76 aa12.7□□□□□ -0.38
RHBDD3-203ENST00000413137 DMAC1Q96GE9 116 aa12.7□□□□□ -0.38
RHBDD3-203ENST00000413137 SPANXA2-OT1Q8N9U9 137 aa12.68□□□□□ -0.38
RHBDD3-203ENST00000413137 A8MUN3 132 aa12.67□□□□□ -0.38
RHBDD3-203ENST00000413137 M0R2T5 61 aa12.6□□□□□ -0.39
RHBDD3-203ENST00000413137 PCP4P48539 62 aa12.6□□□□□ -0.39
RHBDD3-203ENST00000413137 S4R3F8 94 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms