RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 C9orf92A6NGG3 77 aa2.88□□□□□ -1.95
R3HDM1-204ENST00000410054 MUC6Q6W4X9 2439 aa2.88□□□□□ -1.95
R3HDM1-204ENST00000410054 NOTCH2Q04721 2471 aa2.87□□□□□ -1.95
R3HDM1-204ENST00000410054 CACNA1AO00555 2505 aa2.87□□□□□ -1.95
R3HDM1-204ENST00000410054 UTP20O75691 2785 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-204ENST00000410054 FBN2P35556 2912 aa2.86□□□□□ -1.95
R3HDM1-204ENST00000410054 MTORP42345 2549 aa2.86□□□□□ -1.95
R3HDM1-204ENST00000410054 CFAP46Q8IYW2 2715 aa2.85□□□□□ -1.95
R3HDM1-204ENST00000410054 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-204ENST00000410054 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
R3HDM1-204ENST00000410054 COL7A1Q02388 2944 aa2.84□□□□□ -1.95
R3HDM1-204ENST00000410054 HECTD4Q9Y4D8 3996 aa2.84□□□□□ -1.95
R3HDM1-204ENST00000410054 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.96
R3HDM1-204ENST00000410054 FAT2Q9NYQ8 4349 aa2.83□□□□□ -1.96
R3HDM1-204ENST00000410054 TACC2O95359 2948 aa2.83□□□□□ -1.96
R3HDM1-204ENST00000410054 M0QZ58 72 aa2.83□□□□□ -1.96
R3HDM1-204ENST00000410054 SPRR1AP35321 89 aa2.83□□□□□ -1.96
R3HDM1-204ENST00000410054 ZNF292O60281 2723 aa2.83□□□□□ -1.96
R3HDM1-204ENST00000410054 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-204ENST00000410054 PIEZO2Q9H5I5 2752 aa2.82□□□□□ -1.96
R3HDM1-204ENST00000410054 MYO18BQ8IUG5 2567 aa2.82□□□□□ -1.96
R3HDM1-204ENST00000410054 SPTBN4Q9H254 2564 aa2.8□□□□□ -1.96
R3HDM1-204ENST00000410054 ANKRD11Q6UB99 2663 aaPredicted RBP2.8□□□□□ -1.96
R3HDM1-204ENST00000410054 H3BNG1 76 aa2.79□□□□□ -1.96
R3HDM1-204ENST00000410054 DNAH6Q9C0G6 4158 aa2.79□□□□□ -1.96
R3HDM1-204ENST00000410054 FBN3Q75N90 2809 aa2.78□□□□□ -1.96
R3HDM1-204ENST00000410054 FAT3Q8TDW7 4589 aa2.78□□□□□ -1.97
R3HDM1-204ENST00000410054 TLN1Q9Y490 2541 aaKnown RBP2.77□□□□□ -1.97
R3HDM1-204ENST00000410054 OTOGQ6ZRI0 2925 aa2.77□□□□□ -1.97
R3HDM1-204ENST00000410054 RYR3Q15413 4870 aa2.77□□□□□ -1.97
R3HDM1-204ENST00000410054 PKD1P98161 4303 aa2.77□□□□□ -1.97
R3HDM1-204ENST00000410054 TNP1P09430 55 aa2.77□□□□□ -1.97
R3HDM1-204ENST00000410054 VPS13BQ7Z7G8 4022 aa2.76□□□□□ -1.97
R3HDM1-204ENST00000410054 MAPK1IP1LQ8NDC0 245 aa2.75□□□□□ -1.97
R3HDM1-204ENST00000410054 DNAH9Q9NYC9 4486 aa2.75□□□□□ -1.97
R3HDM1-204ENST00000410054 PDZD2O15018 2839 aa2.75□□□□□ -1.97
R3HDM1-204ENST00000410054 HYDINQ4G0P3 5121 aa2.74□□□□□ -1.97
R3HDM1-204ENST00000410054 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
R3HDM1-204ENST00000410054 KMT2CQ8NEZ4 4911 aaKnown RBP2.73□□□□□ -1.97
R3HDM1-204ENST00000410054 EPG5Q9HCE0 2579 aa2.73□□□□□ -1.97
R3HDM1-204ENST00000410054 CEP295Q9C0D2 2601 aa2.73□□□□□ -1.97
R3HDM1-204ENST00000410054 PKHD1P08F94 4074 aa2.71□□□□□ -1.98
R3HDM1-204ENST00000410054 UBR5O95071 2799 aaPredicted RBP2.71□□□□□ -1.98
R3HDM1-204ENST00000410054 DNAH2Q9P225 4427 aa2.7□□□□□ -1.98
R3HDM1-204ENST00000410054 KMT2AQ03164 3969 aa2.7□□□□□ -1.98
R3HDM1-204ENST00000410054 UNC79Q9P2D8 2635 aa2.69□□□□□ -1.98
R3HDM1-204ENST00000410054 VWFP04275 2813 aa2.69□□□□□ -1.98
R3HDM1-204ENST00000410054 PKHD1L1Q86WI1 4243 aa2.69□□□□□ -1.98
R3HDM1-204ENST00000410054 CHD6Q8TD26 2715 aa2.66□□□□□ -1.98
R3HDM1-204ENST00000410054 ALMS1Q8TCU4 4167 aa2.65□□□□□ -1.98
R3HDM1-204ENST00000410054 RYR2Q92736 4967 aa2.64□□□□□ -1.99
R3HDM1-204ENST00000410054 FBN1P35555 2871 aaKnown RBP2.64□□□□□ -1.99
R3HDM1-204ENST00000410054 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
R3HDM1-204ENST00000410054 Q5VSD8 79 aa2.64□□□□□ -1.99
R3HDM1-204ENST00000410054 USP9YO00507 2555 aaPredicted RBP2.64□□□□□ -1.99
R3HDM1-204ENST00000410054 J3QKU1 62 aa2.63□□□□□ -1.99
R3HDM1-204ENST00000410054 USP9XQ93008 2570 aaPredicted RBP2.63□□□□□ -1.99
R3HDM1-204ENST00000410054 MXRA5Q9NR99 2828 aa2.62□□□□□ -1.99
R3HDM1-204ENST00000410054 BAHCC1Q9P281 2608 aa2.62□□□□□ -1.99
R3HDM1-204ENST00000410054 VPS13DQ5THJ4 4388 aa2.61□□□□□ -1.99
R3HDM1-204ENST00000410054 SETD2Q9BYW2 2564 aaPredicted RBP2.61□□□□□ -1.99
R3HDM1-204ENST00000410054 NIPBLQ6KC79 2804 aaeCLIP2.61□□□□□ -1.99
R3HDM1-204ENST00000410054 NF1P21359 2839 aa2.6□□□□□ -1.99
R3HDM1-204ENST00000410054 FASNP49327 2511 aaKnown RBP2.6□□□□□ -1.99
R3HDM1-204ENST00000410054 ZANQ9Y493 2812 aa2.6□□□□□ -1.99
R3HDM1-204ENST00000410054 FLNCQ14315 2725 aa2.59□□□□□ -1.99
R3HDM1-204ENST00000410054 STARD9Q9P2P6 4700 aa2.59□□□□□ -1.99
R3HDM1-204ENST00000410054 KRTAP7-1Q8IUC3 87 aa2.59□□□□□ -2
R3HDM1-204ENST00000410054 DNAH11Q96DT5 4516 aa2.59□□□□□ -2
R3HDM1-204ENST00000410054 MAP1AP78559 2803 aaPredicted RBP2.59□□□□□ -2
R3HDM1-204ENST00000410054 MAST4O15021 2626 aa2.58□□□□□ -2
R3HDM1-204ENST00000410054 XP32Q5T750 250 aa2.58□□□□□ -2
R3HDM1-204ENST00000410054 KRTAP3-1Q9BYR8 98 aa2.58□□□□□ -2
R3HDM1-204ENST00000410054 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
R3HDM1-204ENST00000410054 IGSF10Q6WRI0 2623 aa2.57□□□□□ -2
R3HDM1-204ENST00000410054 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
R3HDM1-204ENST00000410054 MYCBP2O75592 4640 aa2.56□□□□□ -2
R3HDM1-204ENST00000410054 STAB2Q8WWQ8 2551 aa2.55□□□□□ -2
R3HDM1-204ENST00000410054 DNAH10Q8IVF4 4471 aa2.55□□□□□ -2
R3HDM1-204ENST00000410054 KRTAP1-3Q8IUG1 177 aa2.54□□□□□ -2
R3HDM1-204ENST00000410054 TEX15Q9BXT5 2789 aa2.54□□□□□ -2
R3HDM1-204ENST00000410054 SETXQ7Z333 2677 aaKnown RBP2.54□□□□□ -2
R3HDM1-204ENST00000410054 TEP1Q99973 2627 aaKnown RBP2.54□□□□□ -2
R3HDM1-204ENST00000410054 M0R2T5 61 aa2.54□□□□□ -2
R3HDM1-204ENST00000410054 KRTAP10-9P60411 292 aa2.54□□□□□ -2
R3HDM1-204ENST00000410054 CENPEQ02224 2701 aa2.53□□□□□ -2
R3HDM1-204ENST00000410054 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
R3HDM1-204ENST00000410054 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2.01
R3HDM1-204ENST00000410054 FLNBO75369 2602 aaKnown RBP2.52□□□□□ -2.01
R3HDM1-204ENST00000410054 APCP25054 2843 aa2.52□□□□□ -2.01
R3HDM1-204ENST00000410054 KRTAP19-4Q3LI73 84 aa2.51□□□□□ -2.01
R3HDM1-204ENST00000410054 STAB1Q9NY15 2570 aa2.51□□□□□ -2.01
R3HDM1-204ENST00000410054 NSD1Q96L73 2696 aaPredicted RBP2.51□□□□□ -2.01
R3HDM1-204ENST00000410054 PKD1L1Q8TDX9 2849 aa2.5□□□□□ -2.01
R3HDM1-204ENST00000410054 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
R3HDM1-204ENST00000410054 KRTAP1-1Q07627 177 aa2.49□□□□□ -2.01
R3HDM1-204ENST00000410054 ITPR3Q14573 2671 aa2.48□□□□□ -2.01
R3HDM1-204ENST00000410054 USP24Q9UPU5 2620 aa2.48□□□□□ -2.01
R3HDM1-204ENST00000410054 GCN1Q92616 2671 aaKnown RBP2.48□□□□□ -2.01
R3HDM1-204ENST00000410054 LCE2AQ5TA79 106 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms