RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 TENM1Q9UKZ4 2725 aa1.91□□□□□ -2.1
CUL3-204ENST00000409777 A0A0G2JQZ4 141 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 KTN1-AS1Q86SY8 53 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 COA5Q86WW8 74 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 CDC42SE1Q9NRR8 79 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 NOTCH2Q04721 2471 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 A0A087X002 238 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 LRCOL1A6NCL2 159 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 WFDC13Q8IUB5 93 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 OTOGQ6ZRI0 2925 aa1.9□□□□□ -2.11
CUL3-204ENST00000409777 FN1P02751 2386 aaKnown RBP1.89□□□□□ -2.11
CUL3-204ENST00000409777 KRTAP1-5Q9BYS1 174 aa1.89□□□□□ -2.11
CUL3-204ENST00000409777 DNAH10Q8IVF4 4471 aa1.89□□□□□ -2.11
CUL3-204ENST00000409777 PRLHP81277 87 aa1.89□□□□□ -2.11
CUL3-204ENST00000409777 NDUFS5O43920 106 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 PRKDCP78527 4128 aaKnown RBP1.88□□□□□ -2.11
CUL3-204ENST00000409777 IGKV2-24A0A0C4DH68 120 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 DEFB116Q30KQ4 102 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 C8orf17Q9NRJ1 99 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 TENM3Q9P273 2699 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 HRES1P13985 223 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 PRR4Q16378 134 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 PRR15LQ9BU68 103 aa1.88□□□□□ -2.11
CUL3-204ENST00000409777 NSD1Q96L73 2696 aaPredicted RBP1.88□□□□□ -2.11
CUL3-204ENST00000409777 PKD1L1Q8TDX9 2849 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 A0A1B0GVX0 72 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 Q6ZRN7 208 aaPredicted RBP1.87□□□□□ -2.11
CUL3-204ENST00000409777 DNAH17Q9UFH2 4485 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 CCDC168Q8NDH2 2452 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 VPS13DQ5THJ4 4388 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 CHKB-CPT1BH3BT56 60 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 C14orf177Q52M58 125 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 HIVEP2P31629 2446 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 DNAH8Q96JB1 4490 aa1.87□□□□□ -2.11
CUL3-204ENST00000409777 SONP18583 2426 aaKnown RBP1.86□□□□□ -2.11
CUL3-204ENST00000409777 SPACA4Q8TDM5 124 aa1.86□□□□□ -2.11
CUL3-204ENST00000409777 DNAH7Q8WXX0 4024 aa1.86□□□□□ -2.11
CUL3-204ENST00000409777 KRTAP15-1Q3LI76 137 aa1.86□□□□□ -2.11
CUL3-204ENST00000409777 C7orf65Q6ZTY9 151 aa1.86□□□□□ -2.11
CUL3-204ENST00000409777 RBM12B-AS1Q9P1G2 102 aa1.86□□□□□ -2.11
CUL3-204ENST00000409777 APLNQ9ULZ1 77 aa1.86□□□□□ -2.11
CUL3-204ENST00000409777 MRPL34Q9BQ48 92 aaKnown RBP1.85□□□□□ -2.11
CUL3-204ENST00000409777 ITPR2Q14571 2701 aa1.85□□□□□ -2.11
CUL3-204ENST00000409777 PANO1I0J062 215 aa1.85□□□□□ -2.11
CUL3-204ENST00000409777 DMAC1Q96GE9 116 aa1.85□□□□□ -2.11
CUL3-204ENST00000409777 SPINK7P58062 85 aa1.84□□□□□ -2.11
CUL3-204ENST00000409777 KRTAP24-1Q3LI83 254 aa1.84□□□□□ -2.11
CUL3-204ENST00000409777 MTORP42345 2549 aa1.84□□□□□ -2.11
CUL3-204ENST00000409777 DNAH6Q9C0G6 4158 aa1.84□□□□□ -2.11
CUL3-204ENST00000409777 K7EIL1 84 aa1.84□□□□□ -2.11
CUL3-204ENST00000409777 Q5W150 140 aa1.84□□□□□ -2.12
CUL3-204ENST00000409777 NOTCH2NLQ7Z3S9 236 aa1.84□□□□□ -2.12
CUL3-204ENST00000409777 ZNF706Q9Y5V0 76 aaPredicted RBP1.84□□□□□ -2.12
CUL3-204ENST00000409777 CSMD3Q7Z407 3707 aa1.84□□□□□ -2.12
CUL3-204ENST00000409777 HECTD4Q9Y4D8 3996 aa1.83□□□□□ -2.12
CUL3-204ENST00000409777 A6NED7 52 aa1.83□□□□□ -2.12
CUL3-204ENST00000409777 SPATA8Q6RVD6 105 aa1.83□□□□□ -2.12
CUL3-204ENST00000409777 ACANP16112 2415 aa1.83□□□□□ -2.12
CUL3-204ENST00000409777 HERC2O95714 4834 aa1.83□□□□□ -2.12
CUL3-204ENST00000409777 C8orf87E5RJ46 101 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 RTL8CO15255 209 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 SPAG11AQ6PDA7 123 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 DNAH2Q9P225 4427 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 KRTAP16-1A8MUX0 517 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 PCOTHQ58A44 107 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 COL6A5A8TX70 2615 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 NBDYA0A0U1RRE5 68 aa1.82□□□□□ -2.12
CUL3-204ENST00000409777 ATRQ13535 2644 aa1.81□□□□□ -2.12
CUL3-204ENST00000409777 IGHV6-1A0A0B4J1U7 121 aa1.81□□□□□ -2.12
CUL3-204ENST00000409777 ZNF861PO60384 105 aa1.81□□□□□ -2.12
CUL3-204ENST00000409777 IGKV2-30P06310 120 aa1.81□□□□□ -2.12
CUL3-204ENST00000409777 ACYP2P14621 99 aa1.81□□□□□ -2.12
CUL3-204ENST00000409777 PLECQ15149 4684 aaKnown RBP1.81□□□□□ -2.12
CUL3-204ENST00000409777 FRAS1Q86XX4 4008 aa1.81□□□□□ -2.12
CUL3-204ENST00000409777 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
CUL3-204ENST00000409777 PRB2P02812 416 aaPredicted RBP1.8□□□□□ -2.12
CUL3-204ENST00000409777 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
CUL3-204ENST00000409777 PSORS1C2Q9UIG4 136 aa1.8□□□□□ -2.12
CUL3-204ENST00000409777 COL7A1Q02388 2944 aa1.79□□□□□ -2.12
CUL3-204ENST00000409777 A0A087WTM6 91 aa1.79□□□□□ -2.12
CUL3-204ENST00000409777 LINC00313P59037 77 aa1.79□□□□□ -2.12
CUL3-204ENST00000409777 SSBP3-AS1Q7Z2R9 100 aa1.79□□□□□ -2.12
CUL3-204ENST00000409777 STAB1Q9NY15 2570 aa1.79□□□□□ -2.12
CUL3-204ENST00000409777 IGLV7-43P04211 117 aa1.78□□□□□ -2.12
CUL3-204ENST00000409777 DNAH11Q96DT5 4516 aa1.78□□□□□ -2.12
CUL3-204ENST00000409777 SACSQ9NZJ4 4579 aa1.78□□□□□ -2.12
CUL3-204ENST00000409777 NUPR2A6NF83 97 aa1.77□□□□□ -2.13
CUL3-204ENST00000409777 IGKV2D-30A0A075B6S6 120 aa1.77□□□□□ -2.13
CUL3-204ENST00000409777 NBEAL1Q6ZS30 2694 aa1.77□□□□□ -2.13
CUL3-204ENST00000409777 PKD1P98161 4303 aa1.77□□□□□ -2.13
CUL3-204ENST00000409777 STARD9Q9P2P6 4700 aa1.77□□□□□ -2.13
CUL3-204ENST00000409777 UBE2DNLQ8IWF7 75 aa1.77□□□□□ -2.13
CUL3-204ENST00000409777 HYDINQ4G0P3 5121 aa1.76□□□□□ -2.13
CUL3-204ENST00000409777 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
CUL3-204ENST00000409777 DNAH5Q8TE73 4624 aa1.76□□□□□ -2.13
CUL3-204ENST00000409777 Q6ZSA8 131 aa1.76□□□□□ -2.13
CUL3-204ENST00000409777 A0A1B0GU69 56 aa1.75□□□□□ -2.13
CUL3-204ENST00000409777 ANAPC11Q9NYG5 84 aa1.75□□□□□ -2.13
CUL3-204ENST00000409777 MEGF8Q7Z7M0 2845 aa1.75□□□□□ -2.13
CUL3-204ENST00000409777 UQCR11O14957 56 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms