RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 CRYBG3Q68DQ2 2970 aa4.29□□□□□ -1.72
SH3D19-203ENST00000409598 NIPBLQ6KC79 2804 aaeCLIP4.29□□□□□ -1.72
SH3D19-203ENST00000409598 ZZEF1O43149 2961 aa4.28□□□□□ -1.72
SH3D19-203ENST00000409598 A6NN06 94 aa4.27□□□□□ -1.73
SH3D19-203ENST00000409598 A8MU10 97 aa4.27□□□□□ -1.73
SH3D19-203ENST00000409598 H1FX-AS1Q4G0G2 97 aa4.27□□□□□ -1.73
SH3D19-203ENST00000409598 MYO15AQ9UKN7 3530 aa4.27□□□□□ -1.73
SH3D19-203ENST00000409598 LINC00472Q9H8W2 130 aa4.27□□□□□ -1.73
SH3D19-203ENST00000409598 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
SH3D19-203ENST00000409598 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
SH3D19-203ENST00000409598 CFAP47Q6ZTR5 3102 aa4.26□□□□□ -1.73
SH3D19-203ENST00000409598 KRTAP13-2Q52LG2 175 aa4.26□□□□□ -1.73
SH3D19-203ENST00000409598 HRNRQ86YZ3 2850 aaPredicted RBP4.25□□□□□ -1.73
SH3D19-203ENST00000409598 A0A0D9SG42 100 aa4.25□□□□□ -1.73
SH3D19-203ENST00000409598 Q5W150 140 aa4.23□□□□□ -1.73
SH3D19-203ENST00000409598 ZANQ9Y493 2812 aa4.23□□□□□ -1.73
SH3D19-203ENST00000409598 M0QZ58 72 aa4.22□□□□□ -1.73
SH3D19-203ENST00000409598 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
SH3D19-203ENST00000409598 TENM2Q9NT68 2774 aa4.2□□□□□ -1.74
SH3D19-203ENST00000409598 KRTAP11-1Q8IUC1 163 aa4.18□□□□□ -1.74
SH3D19-203ENST00000409598 A0A1B0GU33 70 aa4.16□□□□□ -1.74
SH3D19-203ENST00000409598 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
SH3D19-203ENST00000409598 DMAC1Q96GE9 116 aa4.16□□□□□ -1.74
SH3D19-203ENST00000409598 XP32Q5T750 250 aa4.15□□□□□ -1.74
SH3D19-203ENST00000409598 MXRA5Q9NR99 2828 aa4.15□□□□□ -1.75
SH3D19-203ENST00000409598 TENM3Q9P273 2699 aa4.15□□□□□ -1.75
SH3D19-203ENST00000409598 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
SH3D19-203ENST00000409598 KRTAP7-1Q8IUC3 87 aa4.15□□□□□ -1.75
SH3D19-203ENST00000409598 KRTAP16-1A8MUX0 517 aa4.14□□□□□ -1.75
SH3D19-203ENST00000409598 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
SH3D19-203ENST00000409598 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
SH3D19-203ENST00000409598 CELSR2Q9HCU4 2923 aa4.12□□□□□ -1.75
SH3D19-203ENST00000409598 TENM1Q9UKZ4 2725 aa4.12□□□□□ -1.75
SH3D19-203ENST00000409598 KRTAP10-10P60014 251 aa4.11□□□□□ -1.75
SH3D19-203ENST00000409598 NF1P21359 2839 aa4.11□□□□□ -1.75
SH3D19-203ENST00000409598 A8MUU9 505 aa4.11□□□□□ -1.75
SH3D19-203ENST00000409598 FBN2P35556 2912 aa4.1□□□□□ -1.75
SH3D19-203ENST00000409598 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
SH3D19-203ENST00000409598 DCHS2Q6V1P9 2916 aa4.09□□□□□ -1.75
SH3D19-203ENST00000409598 FBN3Q75N90 2809 aa4.08□□□□□ -1.76
SH3D19-203ENST00000409598 WDFY3Q8IZQ1 3526 aa4.08□□□□□ -1.76
SH3D19-203ENST00000409598 KRTAP13-3Q3SY46 172 aa4.08□□□□□ -1.76
SH3D19-203ENST00000409598 RELNP78509 3460 aa4.07□□□□□ -1.76
SH3D19-203ENST00000409598 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
SH3D19-203ENST00000409598 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
SH3D19-203ENST00000409598 PDZD2O15018 2839 aa4.06□□□□□ -1.76
SH3D19-203ENST00000409598 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
SH3D19-203ENST00000409598 MUC3AQ02505 3323 aa4.04□□□□□ -1.76
SH3D19-203ENST00000409598 ROMO1P60602 79 aa4.03□□□□□ -1.76
SH3D19-203ENST00000409598 LAMA5O15230 3695 aa4.03□□□□□ -1.76
SH3D19-203ENST00000409598 ZFHX4Q86UP3 3567 aa4.02□□□□□ -1.77
SH3D19-203ENST00000409598 DMDP11532 3685 aa4.02□□□□□ -1.77
SH3D19-203ENST00000409598 ASPMQ8IZT6 3477 aa4.01□□□□□ -1.77
SH3D19-203ENST00000409598 DCHS1Q96JQ0 3298 aa4.01□□□□□ -1.77
SH3D19-203ENST00000409598 OTOGQ6ZRI0 2925 aa4□□□□□ -1.77
SH3D19-203ENST00000409598 PKD1L1Q8TDX9 2849 aa3.96□□□□□ -1.78
SH3D19-203ENST00000409598 CELSR1Q9NYQ6 3014 aa3.93□□□□□ -1.78
SH3D19-203ENST00000409598 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
SH3D19-203ENST00000409598 SMG1Q96Q15 3661 aaKnown RBP3.92□□□□□ -1.78
SH3D19-203ENST00000409598 TNP1P09430 55 aa3.9□□□□□ -1.79
SH3D19-203ENST00000409598 CSMD1Q96PZ7 3565 aa3.89□□□□□ -1.79
SH3D19-203ENST00000409598 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
SH3D19-203ENST00000409598 KRTAP4-5Q9BYR2 181 aa3.84□□□□□ -1.8
SH3D19-203ENST00000409598 TGP01266 2768 aa3.83□□□□□ -1.8
SH3D19-203ENST00000409598 H0YAA0 97 aa3.81□□□□□ -1.8
SH3D19-203ENST00000409598 VWFP04275 2813 aa3.81□□□□□ -1.8
SH3D19-203ENST00000409598 FBN1P35555 2871 aaKnown RBP3.81□□□□□ -1.8
SH3D19-203ENST00000409598 SVEP1Q4LDE5 3571 aa3.8□□□□□ -1.8
SH3D19-203ENST00000409598 NBPF19A0A087WUL8 3843 aa3.77□□□□□ -1.81
SH3D19-203ENST00000409598 BSNQ9UPA5 3926 aa3.77□□□□□ -1.81
SH3D19-203ENST00000409598 SPENQ96T58 3664 aaKnown RBP3.77□□□□□ -1.81
SH3D19-203ENST00000409598 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
SH3D19-203ENST00000409598 ZFHX3Q15911 3703 aa3.72□□□□□ -1.81
SH3D19-203ENST00000409598 ANK3Q12955 4377 aaKnown RBP3.72□□□□□ -1.81
SH3D19-203ENST00000409598 CSMD2Q7Z408 3487 aa3.69□□□□□ -1.82
SH3D19-203ENST00000409598 ALMS1Q8TCU4 4167 aa3.68□□□□□ -1.82
SH3D19-203ENST00000409598 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
SH3D19-203ENST00000409598 CUBNO60494 3623 aa3.66□□□□□ -1.82
SH3D19-203ENST00000409598 PP632Q6XCG6 107 aa3.66□□□□□ -1.82
SH3D19-203ENST00000409598 P0C880 135 aa3.64□□□□□ -1.83
SH3D19-203ENST00000409598 SRRM2Q9UQ35 2752 aaKnown RBP3.64□□□□□ -1.83
SH3D19-203ENST00000409598 TRRAPQ9Y4A5 3859 aa3.61□□□□□ -1.83
SH3D19-203ENST00000409598 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
SH3D19-203ENST00000409598 MEGF8Q7Z7M0 2845 aa3.53□□□□□ -1.85
SH3D19-203ENST00000409598 VPS13CQ709C8 3753 aa3.52□□□□□ -1.85
SH3D19-203ENST00000409598 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
SH3D19-203ENST00000409598 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
SH3D19-203ENST00000409598 COL7A1Q02388 2944 aa3.5□□□□□ -1.85
SH3D19-203ENST00000409598 KRTAP3-1Q9BYR8 98 aa3.49□□□□□ -1.85
SH3D19-203ENST00000409598 DNHD1Q96M86 4753 aa3.48□□□□□ -1.85
SH3D19-203ENST00000409598 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.85
SH3D19-203ENST00000409598 DNAH1Q9P2D7 4330 aa3.46□□□□□ -1.86
SH3D19-203ENST00000409598 DNAH11Q96DT5 4516 aa3.46□□□□□ -1.86
SH3D19-203ENST00000409598 ZNF469Q96JG9 3925 aaPredicted RBP3.45□□□□□ -1.86
SH3D19-203ENST00000409598 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
SH3D19-203ENST00000409598 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
SH3D19-203ENST00000409598 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
SH3D19-203ENST00000409598 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.86
SH3D19-203ENST00000409598 KRTAP3-3Q9BYR6 98 aa3.4□□□□□ -1.87
SH3D19-203ENST00000409598 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms