RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 TRAV22A0A0B4J277 110 aa9.66□□□□□ -0.86
PIKFYVE-204ENST00000407449 SPINK6Q6UWN8 80 aa9.66□□□□□ -0.86
PIKFYVE-204ENST00000407449 Q5XG85 94 aa9.64□□□□□ -0.87
PIKFYVE-204ENST00000407449 MRPL34Q9BQ48 92 aaKnown RBP9.64□□□□□ -0.87
PIKFYVE-204ENST00000407449 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
PIKFYVE-204ENST00000407449 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
PIKFYVE-204ENST00000407449 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
PIKFYVE-204ENST00000407449 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
PIKFYVE-204ENST00000407449 NDUFS5O43920 106 aa9.59□□□□□ -0.87
PIKFYVE-204ENST00000407449 VPS13BQ7Z7G8 4022 aa9.58□□□□□ -0.88
PIKFYVE-204ENST00000407449 SMIM26A0A096LP01 95 aa9.57□□□□□ -0.88
PIKFYVE-204ENST00000407449 PLA2G1BP04054 148 aaKnown RBP9.57□□□□□ -0.88
PIKFYVE-204ENST00000407449 LIMD2Q9BT23 127 aa9.57□□□□□ -0.88
PIKFYVE-204ENST00000407449 CYP4F30PQ9H0H9 118 aa9.57□□□□□ -0.88
PIKFYVE-204ENST00000407449 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
PIKFYVE-204ENST00000407449 DYNC1H1Q14204 4646 aaKnown RBP9.56□□□□□ -0.88
PIKFYVE-204ENST00000407449 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
PIKFYVE-204ENST00000407449 TYMSOSQ8TAI1 123 aa9.54□□□□□ -0.88
PIKFYVE-204ENST00000407449 PKHD1P08F94 4074 aa9.54□□□□□ -0.88
PIKFYVE-204ENST00000407449 C4orf48Q5BLP8 95 aa9.51□□□□□ -0.89
PIKFYVE-204ENST00000407449 RYR2Q92736 4967 aa9.51□□□□□ -0.89
PIKFYVE-204ENST00000407449 PRR4Q16378 134 aa9.5□□□□□ -0.89
PIKFYVE-204ENST00000407449 LINC00313P59037 77 aa9.49□□□□□ -0.89
PIKFYVE-204ENST00000407449 FP248Q71RG6 208 aaPredicted RBP9.49□□□□□ -0.89
PIKFYVE-204ENST00000407449 SPINK1P00995 79 aa9.49□□□□□ -0.89
PIKFYVE-204ENST00000407449 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
PIKFYVE-204ENST00000407449 C4orf26Q17RF5 130 aa9.46□□□□□ -0.9
PIKFYVE-204ENST00000407449 PRR26Q8N8Z3 221 aa9.45□□□□□ -0.9
PIKFYVE-204ENST00000407449 APOBP04114 4563 aaKnown RBP9.44□□□□□ -0.9
PIKFYVE-204ENST00000407449 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
PIKFYVE-204ENST00000407449 KRTAP10-4P60372 401 aaPredicted RBP9.43□□□□□ -0.9
PIKFYVE-204ENST00000407449 RPS29P62273 56 aaKnown RBP9.43□□□□□ -0.9
PIKFYVE-204ENST00000407449 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
PIKFYVE-204ENST00000407449 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
PIKFYVE-204ENST00000407449 LOC101927531A0A1B0GV80 90 aa9.42□□□□□ -0.9
PIKFYVE-204ENST00000407449 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
PIKFYVE-204ENST00000407449 Q8N9P0 234 aaPredicted RBP9.42□□□□□ -0.9
PIKFYVE-204ENST00000407449 SPAG11AQ6PDA7 123 aa9.42□□□□□ -0.9
PIKFYVE-204ENST00000407449 Q5W150 140 aa9.41□□□□□ -0.9
PIKFYVE-204ENST00000407449 KRTAP16-1A8MUX0 517 aa9.4□□□□□ -0.91
PIKFYVE-204ENST00000407449 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
PIKFYVE-204ENST00000407449 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
PIKFYVE-204ENST00000407449 KMT2CQ8NEZ4 4911 aaKnown RBP9.32□□□□□ -0.92
PIKFYVE-204ENST00000407449 FAT1Q14517 4588 aa9.31□□□□□ -0.92
PIKFYVE-204ENST00000407449 Q1T7F1 81 aa9.3□□□□□ -0.92
PIKFYVE-204ENST00000407449 COA5Q86WW8 74 aa9.28□□□□□ -0.92
PIKFYVE-204ENST00000407449 PKHD1L1Q86WI1 4243 aa9.28□□□□□ -0.92
PIKFYVE-204ENST00000407449 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.93
PIKFYVE-204ENST00000407449 IGKV2-30P06310 120 aa9.25□□□□□ -0.93
PIKFYVE-204ENST00000407449 V9GYY9 64 aa9.23□□□□□ -0.93
PIKFYVE-204ENST00000407449 PRO0628Q9UI54 55 aa9.21□□□□□ -0.94
PIKFYVE-204ENST00000407449 HRES1P13985 223 aa9.19□□□□□ -0.94
PIKFYVE-204ENST00000407449 Q5VSD8 79 aa9.14□□□□□ -0.95
PIKFYVE-204ENST00000407449 DMAC1Q96GE9 116 aa9.14□□□□□ -0.95
PIKFYVE-204ENST00000407449 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
PIKFYVE-204ENST00000407449 ACYP2P14621 99 aa9.13□□□□□ -0.95
PIKFYVE-204ENST00000407449 PSPHP1O15172 72 aa9.11□□□□□ -0.95
PIKFYVE-204ENST00000407449 RYR3Q15413 4870 aa9.1□□□□□ -0.95
PIKFYVE-204ENST00000407449 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
PIKFYVE-204ENST00000407449 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
PIKFYVE-204ENST00000407449 A8MUU9 505 aa9.08□□□□□ -0.96
PIKFYVE-204ENST00000407449 HSPG2P98160 4391 aa9.08□□□□□ -0.96
PIKFYVE-204ENST00000407449 A8MUN3 132 aa9.08□□□□□ -0.96
PIKFYVE-204ENST00000407449 KRTAP10-8P60410 259 aa9.07□□□□□ -0.96
PIKFYVE-204ENST00000407449 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
PIKFYVE-204ENST00000407449 Q8N1X5 172 aa9.06□□□□□ -0.96
PIKFYVE-204ENST00000407449 RYR1P21817 5038 aa9.05□□□□□ -0.96
PIKFYVE-204ENST00000407449 BRK1Q8WUW1 75 aa9.04□□□□□ -0.96
PIKFYVE-204ENST00000407449 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
PIKFYVE-204ENST00000407449 Q5VV11 94 aa9.04□□□□□ -0.96
PIKFYVE-204ENST00000407449 PRR15LQ9BU68 103 aa9.04□□□□□ -0.96
PIKFYVE-204ENST00000407449 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
PIKFYVE-204ENST00000407449 CHKB-CPT1BH3BT56 60 aa9□□□□□ -0.97
PIKFYVE-204ENST00000407449 TNXBP22105 4242 aa8.99□□□□□ -0.97
PIKFYVE-204ENST00000407449 Q75L30 129 aa8.97□□□□□ -0.97
PIKFYVE-204ENST00000407449 FAT3Q8TDW7 4589 aa8.97□□□□□ -0.97
PIKFYVE-204ENST00000407449 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
PIKFYVE-204ENST00000407449 LRP1Q07954 4544 aaKnown RBP8.95□□□□□ -0.98
PIKFYVE-204ENST00000407449 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
PIKFYVE-204ENST00000407449 MT1HL1P0DM35 61 aa8.85□□□□□ -0.99
PIKFYVE-204ENST00000407449 SPINK7P58062 85 aa8.85□□□□□ -0.99
PIKFYVE-204ENST00000407449 A6NED7 52 aa8.83□□□□□ -1
PIKFYVE-204ENST00000407449 RPL37P61927 97 aaKnown RBP8.79□□□□□ -1
PIKFYVE-204ENST00000407449 ATP11AUNQ6ZP68 121 aa8.79□□□□□ -1
PIKFYVE-204ENST00000407449 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
PIKFYVE-204ENST00000407449 A0A1B0GU69 56 aa8.76□□□□□ -1.01
PIKFYVE-204ENST00000407449 XP32Q5T750 250 aa8.76□□□□□ -1.01
PIKFYVE-204ENST00000407449 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
PIKFYVE-204ENST00000407449 A8MU10 97 aa8.74□□□□□ -1.01
PIKFYVE-204ENST00000407449 LCA10Q71F78 164 aa8.74□□□□□ -1.01
PIKFYVE-204ENST00000407449 KRTAP3-1Q9BYR8 98 aa8.74□□□□□ -1.01
PIKFYVE-204ENST00000407449 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
PIKFYVE-204ENST00000407449 SPTSSBQ8NFR3 76 aa8.72□□□□□ -1.01
PIKFYVE-204ENST00000407449 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
PIKFYVE-204ENST00000407449 MYCBP2O75592 4640 aa8.69□□□□□ -1.02
PIKFYVE-204ENST00000407449 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
PIKFYVE-204ENST00000407449 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
PIKFYVE-204ENST00000407449 SEC61GP60059 68 aa8.59□□□□□ -1.03
PIKFYVE-204ENST00000407449 KRTAP4-5Q9BYR2 181 aa8.58□□□□□ -1.04
PIKFYVE-204ENST00000407449 UQCR11O14957 56 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms