RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 SACSQ9NZJ4 4579 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 A0A087X002 238 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 LOC101927531A0A1B0GV80 90 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 LCE2CQ5TA81 110 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 NOTCH2NLQ7Z3S9 236 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 MRPL34Q9BQ48 92 aaKnown RBP2.26□□□□□ -2.05
RTN4-209ENST00000405240 STAB2Q8WWQ8 2551 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 Q5VV11 94 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 Q6ZSA8 131 aa2.26□□□□□ -2.05
RTN4-209ENST00000405240 SSBP3-AS1Q7Z2R9 100 aa2.25□□□□□ -2.05
RTN4-209ENST00000405240 COL6A5A8TX70 2615 aa2.25□□□□□ -2.05
RTN4-209ENST00000405240 LIMD2Q9BT23 127 aa2.25□□□□□ -2.05
RTN4-209ENST00000405240 COA5Q86WW8 74 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 ANAPC11Q9NYG5 84 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 PRR4Q16378 134 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 C1orf134Q5TEV5 83 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 Q75L30 129 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 C8orf87E5RJ46 101 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 PKHD1L1Q86WI1 4243 aa2.24□□□□□ -2.05
RTN4-209ENST00000405240 IGHV6-1A0A0B4J1U7 121 aa2.23□□□□□ -2.05
RTN4-209ENST00000405240 KRTAP16-1A8MUX0 517 aa2.23□□□□□ -2.05
RTN4-209ENST00000405240 Q5W150 140 aa2.23□□□□□ -2.05
RTN4-209ENST00000405240 HYDINQ4G0P3 5121 aa2.23□□□□□ -2.05
RTN4-209ENST00000405240 KRTAP13-2Q52LG2 175 aa2.23□□□□□ -2.05
RTN4-209ENST00000405240 A8MUN3 132 aa2.23□□□□□ -2.05
RTN4-209ENST00000405240 HRES1P13985 223 aa2.23□□□□□ -2.05
RTN4-209ENST00000405240 VPS13BQ7Z7G8 4022 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 KRTAP1-4P0C5Y4 121 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 KRTAP10-2P60368 255 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 CIRBP-AS1Q8TBR5 109 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 KRTAP17-1Q9BYP8 105 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 PSPHP1O15172 72 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 PRR26Q8N8Z3 221 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 LRP1BQ9NZR2 4599 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 PKHD1P08F94 4074 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 MEGF8Q7Z7M0 2845 aa2.22□□□□□ -2.05
RTN4-209ENST00000405240 XP32Q5T750 250 aa2.21□□□□□ -2.06
RTN4-209ENST00000405240 CDK2AP2O75956 126 aa2.21□□□□□ -2.06
RTN4-209ENST00000405240 MGAM2Q2M2H8 2515 aa2.2□□□□□ -2.06
RTN4-209ENST00000405240 PCOTHQ58A44 107 aa2.2□□□□□ -2.06
RTN4-209ENST00000405240 KRTAP10-1P60331 282 aa2.2□□□□□ -2.06
RTN4-209ENST00000405240 LCA10Q71F78 164 aa2.2□□□□□ -2.06
RTN4-209ENST00000405240 DMAC1Q96GE9 116 aa2.2□□□□□ -2.06
RTN4-209ENST00000405240 IGKV2-30P06310 120 aa2.19□□□□□ -2.06
RTN4-209ENST00000405240 LORP23490 312 aaPredicted RBP2.19□□□□□ -2.06
RTN4-209ENST00000405240 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
RTN4-209ENST00000405240 A8MU10 97 aa2.19□□□□□ -2.06
RTN4-209ENST00000405240 LINC00313P59037 77 aa2.19□□□□□ -2.06
RTN4-209ENST00000405240 PRR15LQ9BU68 103 aa2.19□□□□□ -2.06
RTN4-209ENST00000405240 APOBP04114 4563 aaKnown RBP2.19□□□□□ -2.06
RTN4-209ENST00000405240 FAM229AH3BQW9 127 aa2.18□□□□□ -2.06
RTN4-209ENST00000405240 RPS29P62273 56 aaKnown RBP2.18□□□□□ -2.06
RTN4-209ENST00000405240 NDUFS5O43920 106 aa2.18□□□□□ -2.06
RTN4-209ENST00000405240 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
RTN4-209ENST00000405240 ATP11AUNQ6ZP68 121 aa2.17□□□□□ -2.06
RTN4-209ENST00000405240 CHKB-CPT1BH3BT56 60 aa2.17□□□□□ -2.06
RTN4-209ENST00000405240 LY6G6CO95867 125 aa2.17□□□□□ -2.06
RTN4-209ENST00000405240 ACYP2P14621 99 aa2.17□□□□□ -2.06
RTN4-209ENST00000405240 A6NN06 94 aa2.17□□□□□ -2.06
RTN4-209ENST00000405240 KRTAP21-3Q3LHN1 58 aa2.17□□□□□ -2.06
RTN4-209ENST00000405240 SPINK6Q6UWN8 80 aa2.17□□□□□ -2.06
RTN4-209ENST00000405240 SPAG11AQ6PDA7 123 aa2.16□□□□□ -2.06
RTN4-209ENST00000405240 KRTAP10-4P60372 401 aaPredicted RBP2.16□□□□□ -2.06
RTN4-209ENST00000405240 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
RTN4-209ENST00000405240 SPINK1P00995 79 aa2.15□□□□□ -2.06
RTN4-209ENST00000405240 SPINK7P58062 85 aa2.15□□□□□ -2.07
RTN4-209ENST00000405240 IGKV2D-30A0A075B6S6 120 aa2.14□□□□□ -2.07
RTN4-209ENST00000405240 A0A1B0GVY2 172 aa2.14□□□□□ -2.07
RTN4-209ENST00000405240 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
RTN4-209ENST00000405240 TNXBP22105 4242 aa2.13□□□□□ -2.07
RTN4-209ENST00000405240 TGP01266 2768 aa2.13□□□□□ -2.07
RTN4-209ENST00000405240 A6NED7 52 aa2.13□□□□□ -2.07
RTN4-209ENST00000405240 HSPG2P98160 4391 aa2.13□□□□□ -2.07
RTN4-209ENST00000405240 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
RTN4-209ENST00000405240 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
RTN4-209ENST00000405240 PLA2G1BP04054 148 aaKnown RBP2.12□□□□□ -2.07
RTN4-209ENST00000405240 A8MUU9 505 aa2.12□□□□□ -2.07
RTN4-209ENST00000405240 TYMSOSQ8TAI1 123 aa2.12□□□□□ -2.07
RTN4-209ENST00000405240 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
RTN4-209ENST00000405240 LINC00304Q8N9R0 145 aa2.1□□□□□ -2.07
RTN4-209ENST00000405240 RETNLBQ9BQ08 111 aa2.1□□□□□ -2.07
RTN4-209ENST00000405240 H3BS24 57 aa2.09□□□□□ -2.07
RTN4-209ENST00000405240 C7orf65Q6ZTY9 151 aa2.09□□□□□ -2.07
RTN4-209ENST00000405240 KRTAP3-1Q9BYR8 98 aa2.09□□□□□ -2.07
RTN4-209ENST00000405240 RYR2Q92736 4967 aa2.09□□□□□ -2.07
RTN4-209ENST00000405240 FAT1Q14517 4588 aa2.09□□□□□ -2.08
RTN4-209ENST00000405240 A0A1B0GU69 56 aa2.09□□□□□ -2.08
RTN4-209ENST00000405240 SEC61GP60059 68 aa2.09□□□□□ -2.08
RTN4-209ENST00000405240 SPTSSBQ8NFR3 76 aa2.08□□□□□ -2.08
RTN4-209ENST00000405240 FAT3Q8TDW7 4589 aa2.08□□□□□ -2.08
RTN4-209ENST00000405240 UQCR11O14957 56 aa2.06□□□□□ -2.08
RTN4-209ENST00000405240 MIR22HGQ0VDD5 57 aa2.06□□□□□ -2.08
RTN4-209ENST00000405240 RBM12B-AS1Q9P1G2 102 aa2.06□□□□□ -2.08
RTN4-209ENST00000405240 KRTAP10-8P60410 259 aa2.05□□□□□ -2.08
RTN4-209ENST00000405240 LRP1Q07954 4544 aaKnown RBP2.05□□□□□ -2.08
RTN4-209ENST00000405240 LOC100996750A0A140TA64 210 aa2.04□□□□□ -2.08
RTN4-209ENST00000405240 KRTAP4-6Q9BYQ5 205 aa2.04□□□□□ -2.08
RTN4-209ENST00000405240 Q8N1X5 172 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms