RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 IGHV6-1A0A0B4J1U7 121 aa7.36□□□□□ -1.23
VPREB1-202ENST00000403807 NDUFB1O75438 58 aa7.36□□□□□ -1.23
VPREB1-202ENST00000403807 Q75L30 129 aa7.35□□□□□ -1.23
VPREB1-202ENST00000403807 MUC2Q02817 5179 aa7.34□□□□□ -1.23
VPREB1-202ENST00000403807 A0A1B0GVX0 72 aa7.34□□□□□ -1.23
VPREB1-202ENST00000403807 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
VPREB1-202ENST00000403807 ATP11AUNQ6ZP68 121 aa7.33□□□□□ -1.24
VPREB1-202ENST00000403807 ETDBQ3ZM63 59 aa7.32□□□□□ -1.24
VPREB1-202ENST00000403807 C20orf166-AS1Q96NR2 134 aa7.32□□□□□ -1.24
VPREB1-202ENST00000403807 A8MUU9 505 aa7.31□□□□□ -1.24
VPREB1-202ENST00000403807 A8MWP4 228 aa7.31□□□□□ -1.24
VPREB1-202ENST00000403807 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
VPREB1-202ENST00000403807 KRTAP4-1Q9BYQ7 146 aa7.3□□□□□ -1.24
VPREB1-202ENST00000403807 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
VPREB1-202ENST00000403807 IGKV3D-7A0A0C4DH55 119 aa7.27□□□□□ -1.25
VPREB1-202ENST00000403807 BPY2O14599 106 aa7.27□□□□□ -1.25
VPREB1-202ENST00000403807 Q6ZVQ6 151 aa7.27□□□□□ -1.25
VPREB1-202ENST00000403807 UBL5Q9BZL1 73 aa7.27□□□□□ -1.25
VPREB1-202ENST00000403807 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
VPREB1-202ENST00000403807 A0A1B0GV90 55 aa7.25□□□□□ -1.25
VPREB1-202ENST00000403807 C8orf17Q9NRJ1 99 aa7.25□□□□□ -1.25
VPREB1-202ENST00000403807 LINC00846Q9NV44 126 aa7.25□□□□□ -1.25
VPREB1-202ENST00000403807 K7EQZ3 153 aa7.2□□□□□ -1.26
VPREB1-202ENST00000403807 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
VPREB1-202ENST00000403807 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
VPREB1-202ENST00000403807 ACYP1P07311 99 aa7.17□□□□□ -1.26
VPREB1-202ENST00000403807 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
VPREB1-202ENST00000403807 hDV103S1A0JD37 113 aa7.16□□□□□ -1.26
VPREB1-202ENST00000403807 TMEM254Q8TBM7 123 aa7.16□□□□□ -1.26
VPREB1-202ENST00000403807 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
VPREB1-202ENST00000403807 MRPL34Q9BQ48 92 aaKnown RBP7.15□□□□□ -1.26
VPREB1-202ENST00000403807 KRTAP9-2Q9BYQ4 174 aa7.15□□□□□ -1.26
VPREB1-202ENST00000403807 Q8N9L7 120 aa7.14□□□□□ -1.27
VPREB1-202ENST00000403807 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
VPREB1-202ENST00000403807 FAM240AA0A1B0GVK7 77 aa7.12□□□□□ -1.27
VPREB1-202ENST00000403807 CXCL6P80162 114 aa7.11□□□□□ -1.27
VPREB1-202ENST00000403807 NDUFS5O43920 106 aa7.1□□□□□ -1.27
VPREB1-202ENST00000403807 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
VPREB1-202ENST00000403807 WFDC13Q8IUB5 93 aa7.1□□□□□ -1.27
VPREB1-202ENST00000403807 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
VPREB1-202ENST00000403807 HCG22E2RYF7 251 aa7.06□□□□□ -1.28
VPREB1-202ENST00000403807 COX6B2Q6YFQ2 88 aa7.06□□□□□ -1.28
VPREB1-202ENST00000403807 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
VPREB1-202ENST00000403807 J3QR89 54 aa7.04□□□□□ -1.28
VPREB1-202ENST00000403807 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
VPREB1-202ENST00000403807 SPINK7P58062 85 aa7.02□□□□□ -1.29
VPREB1-202ENST00000403807 LINC00643Q86TS7 51 aa7□□□□□ -1.29
VPREB1-202ENST00000403807 RBM12B-AS1Q9P1G2 102 aa6.99□□□□□ -1.29
VPREB1-202ENST00000403807 HRES1P13985 223 aa6.98□□□□□ -1.29
VPREB1-202ENST00000403807 KRTAP9-6A0A140TA67 174 aa6.96□□□□□ -1.3
VPREB1-202ENST00000403807 HIST1H4AP62805 103 aaKnown RBP6.96□□□□□ -1.3
VPREB1-202ENST00000403807 MT1HP80294 61 aa6.96□□□□□ -1.3
VPREB1-202ENST00000403807 Q5W150 140 aa6.96□□□□□ -1.3
VPREB1-202ENST00000403807 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
VPREB1-202ENST00000403807 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
VPREB1-202ENST00000403807 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
VPREB1-202ENST00000403807 MPLKIPQ8TAP9 179 aa6.94□□□□□ -1.3
VPREB1-202ENST00000403807 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
VPREB1-202ENST00000403807 M0R2T5 61 aa6.91□□□□□ -1.3
VPREB1-202ENST00000403807 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
VPREB1-202ENST00000403807 IGKV2-30P06310 120 aa6.9□□□□□ -1.3
VPREB1-202ENST00000403807 C7orf65Q6ZTY9 151 aa6.9□□□□□ -1.3
VPREB1-202ENST00000403807 K7ERU9 68 aa6.87□□□□□ -1.31
VPREB1-202ENST00000403807 A0A087WVE0 104 aa6.86□□□□□ -1.31
VPREB1-202ENST00000403807 LCE2DQ5TA82 110 aaPredicted RBP6.84□□□□□ -1.31
VPREB1-202ENST00000403807 UQCRQO14949 82 aa6.81□□□□□ -1.32
VPREB1-202ENST00000403807 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
VPREB1-202ENST00000403807 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
VPREB1-202ENST00000403807 LORP23490 312 aaPredicted RBP6.77□□□□□ -1.33
VPREB1-202ENST00000403807 C4orf26Q17RF5 130 aa6.75□□□□□ -1.33
VPREB1-202ENST00000403807 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
VPREB1-202ENST00000403807 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
VPREB1-202ENST00000403807 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
VPREB1-202ENST00000403807 ATOX1O00244 68 aa6.74□□□□□ -1.33
VPREB1-202ENST00000403807 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
VPREB1-202ENST00000403807 H0Y9P7 68 aa6.73□□□□□ -1.33
VPREB1-202ENST00000403807 SCGB1A1P11684 91 aa6.73□□□□□ -1.33
VPREB1-202ENST00000403807 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
VPREB1-202ENST00000403807 MT-ATP8P03928 68 aa6.72□□□□□ -1.33
VPREB1-202ENST00000403807 OCR1Q9BZK8 76 aa6.71□□□□□ -1.34
VPREB1-202ENST00000403807 MP68P56378 58 aa6.68□□□□□ -1.34
VPREB1-202ENST00000403807 C5orf47Q569G3 176 aa6.68□□□□□ -1.34
VPREB1-202ENST00000403807 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
VPREB1-202ENST00000403807 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
VPREB1-202ENST00000403807 LINC00208Q96KT6 92 aa6.66□□□□□ -1.34
VPREB1-202ENST00000403807 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
VPREB1-202ENST00000403807 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
VPREB1-202ENST00000403807 H3BPC8 53 aa6.62□□□□□ -1.35
VPREB1-202ENST00000403807 FAM236AA0A1B0GUQ0 79 aa6.6□□□□□ -1.35
VPREB1-202ENST00000403807 FAM236BA0A1B0GV22 79 aa6.6□□□□□ -1.35
VPREB1-202ENST00000403807 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
VPREB1-202ENST00000403807 S4R3F8 94 aa6.57□□□□□ -1.36
VPREB1-202ENST00000403807 TRAV7A0A075B6U4 112 aa6.56□□□□□ -1.36
VPREB1-202ENST00000403807 MT2AP02795 61 aa6.56□□□□□ -1.36
VPREB1-202ENST00000403807 KLKP1Q107X0 134 aa6.56□□□□□ -1.36
VPREB1-202ENST00000403807 KRTAP10-10P60014 251 aa6.53□□□□□ -1.36
VPREB1-202ENST00000403807 A8MUN3 132 aa6.51□□□□□ -1.37
VPREB1-202ENST00000403807 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
VPREB1-202ENST00000403807 LCA10Q71F78 164 aa6.51□□□□□ -1.37
VPREB1-202ENST00000403807 MT1FP04733 61 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms