RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PCOTHQ58A44 107 aa11.85□□□□□ -0.51
CCDC47-202ENST00000403162 PRR15LQ9BU68 103 aa11.85□□□□□ -0.51
CCDC47-202ENST00000403162 RYR2Q92736 4967 aa11.84□□□□□ -0.51
CCDC47-202ENST00000403162 IGHV6-1A0A0B4J1U7 121 aa11.84□□□□□ -0.51
CCDC47-202ENST00000403162 CHKB-CPT1BH3BT56 60 aa11.83□□□□□ -0.52
CCDC47-202ENST00000403162 LOC101927531A0A1B0GV80 90 aa11.82□□□□□ -0.52
CCDC47-202ENST00000403162 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
CCDC47-202ENST00000403162 CDK2AP2O75956 126 aa11.81□□□□□ -0.52
CCDC47-202ENST00000403162 MRPL34Q9BQ48 92 aaKnown RBP11.81□□□□□ -0.52
CCDC47-202ENST00000403162 Q75L30 129 aa11.81□□□□□ -0.52
CCDC47-202ENST00000403162 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
CCDC47-202ENST00000403162 NDUFS5O43920 106 aa11.79□□□□□ -0.52
CCDC47-202ENST00000403162 PMAIP1Q13794 54 aa11.79□□□□□ -0.52
CCDC47-202ENST00000403162 KRTAP10-2P60368 255 aa11.78□□□□□ -0.52
CCDC47-202ENST00000403162 A8MU10 97 aa11.78□□□□□ -0.52
CCDC47-202ENST00000403162 FAT2Q9NYQ8 4349 aa11.77□□□□□ -0.52
CCDC47-202ENST00000403162 ZNF861PO60384 105 aa11.77□□□□□ -0.53
CCDC47-202ENST00000403162 PLAC8Q9NZF1 115 aa11.75□□□□□ -0.53
CCDC47-202ENST00000403162 HECTD4Q9Y4D8 3996 aa11.74□□□□□ -0.53
CCDC47-202ENST00000403162 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
CCDC47-202ENST00000403162 ANAPC11Q9NYG5 84 aa11.73□□□□□ -0.53
CCDC47-202ENST00000403162 A0A087X002 238 aa11.72□□□□□ -0.53
CCDC47-202ENST00000403162 NOTCH2NLQ7Z3S9 236 aa11.72□□□□□ -0.53
CCDC47-202ENST00000403162 LINC01558Q9Y6Z2 57 aa11.72□□□□□ -0.53
CCDC47-202ENST00000403162 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
CCDC47-202ENST00000403162 HRES1P13985 223 aa11.68□□□□□ -0.54
CCDC47-202ENST00000403162 A6NED7 52 aa11.67□□□□□ -0.54
CCDC47-202ENST00000403162 LCA10Q71F78 164 aa11.67□□□□□ -0.54
CCDC47-202ENST00000403162 PKD1P98161 4303 aa11.67□□□□□ -0.54
CCDC47-202ENST00000403162 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
CCDC47-202ENST00000403162 RYR3Q15413 4870 aa11.65□□□□□ -0.54
CCDC47-202ENST00000403162 DNAH5Q8TE73 4624 aa11.64□□□□□ -0.55
CCDC47-202ENST00000403162 A0A1B0GVY2 172 aa11.64□□□□□ -0.55
CCDC47-202ENST00000403162 KRTAP13-3Q3SY46 172 aa11.64□□□□□ -0.55
CCDC47-202ENST00000403162 ATP11AUNQ6ZP68 121 aa11.64□□□□□ -0.55
CCDC47-202ENST00000403162 SEC61GP60059 68 aa11.62□□□□□ -0.55
CCDC47-202ENST00000403162 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
CCDC47-202ENST00000403162 CDC42SE1Q9NRR8 79 aa11.61□□□□□ -0.55
CCDC47-202ENST00000403162 Q5W150 140 aa11.6□□□□□ -0.55
CCDC47-202ENST00000403162 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
CCDC47-202ENST00000403162 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
CCDC47-202ENST00000403162 SPTSSBQ8NFR3 76 aa11.57□□□□□ -0.56
CCDC47-202ENST00000403162 C8orf87E5RJ46 101 aa11.55□□□□□ -0.56
CCDC47-202ENST00000403162 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
CCDC47-202ENST00000403162 Q6ZSA8 131 aa11.54□□□□□ -0.56
CCDC47-202ENST00000403162 SSBP3-AS1Q7Z2R9 100 aa11.53□□□□□ -0.56
CCDC47-202ENST00000403162 PKHD1P08F94 4074 aa11.53□□□□□ -0.56
CCDC47-202ENST00000403162 KTN1-AS1Q86SY8 53 aa11.5□□□□□ -0.57
CCDC47-202ENST00000403162 A6NN06 94 aa11.49□□□□□ -0.57
CCDC47-202ENST00000403162 ACYP2P14621 99 aa11.48□□□□□ -0.57
CCDC47-202ENST00000403162 SPINK7P58062 85 aa11.47□□□□□ -0.57
CCDC47-202ENST00000403162 PRR26Q8N8Z3 221 aa11.47□□□□□ -0.57
CCDC47-202ENST00000403162 LRP1BQ9NZR2 4599 aa11.45□□□□□ -0.58
CCDC47-202ENST00000403162 DYNC1H1Q14204 4646 aaKnown RBP11.45□□□□□ -0.58
CCDC47-202ENST00000403162 DMAC1Q96GE9 116 aa11.43□□□□□ -0.58
CCDC47-202ENST00000403162 FAM229AH3BQW9 127 aa11.42□□□□□ -0.58
CCDC47-202ENST00000403162 LINC00313P59037 77 aa11.42□□□□□ -0.58
CCDC47-202ENST00000403162 IGKV2-30P06310 120 aa11.35□□□□□ -0.59
CCDC47-202ENST00000403162 KRTAP13-2Q52LG2 175 aa11.33□□□□□ -0.6
CCDC47-202ENST00000403162 APOBP04114 4563 aaKnown RBP11.3□□□□□ -0.6
CCDC47-202ENST00000403162 KRTAP16-1A8MUX0 517 aa11.3□□□□□ -0.6
CCDC47-202ENST00000403162 C7orf65Q6ZTY9 151 aa11.29□□□□□ -0.6
CCDC47-202ENST00000403162 SMR3BP02814 79 aaPredicted RBP11.28□□□□□ -0.6
CCDC47-202ENST00000403162 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.6
CCDC47-202ENST00000403162 RBM12B-AS1Q9P1G2 102 aa11.24□□□□□ -0.61
CCDC47-202ENST00000403162 EPPK1P58107 5090 aaKnown RBP11.23□□□□□ -0.61
CCDC47-202ENST00000403162 A0A1B0GU69 56 aa11.21□□□□□ -0.62
CCDC47-202ENST00000403162 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
CCDC47-202ENST00000403162 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
CCDC47-202ENST00000403162 IGKV2D-30A0A075B6S6 120 aa11.13□□□□□ -0.63
CCDC47-202ENST00000403162 SPATA8Q6RVD6 105 aa11.13□□□□□ -0.63
CCDC47-202ENST00000403162 FAT1Q14517 4588 aa11.12□□□□□ -0.63
CCDC47-202ENST00000403162 HSPG2P98160 4391 aa11.1□□□□□ -0.63
CCDC47-202ENST00000403162 RYR1P21817 5038 aa11.1□□□□□ -0.63
CCDC47-202ENST00000403162 KRTAP10-4P60372 401 aaPredicted RBP11.08□□□□□ -0.64
CCDC47-202ENST00000403162 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
CCDC47-202ENST00000403162 KIAA1109Q2LD37 5005 aa11.06□□□□□ -0.64
CCDC47-202ENST00000403162 C4orf48Q5BLP8 95 aa11.06□□□□□ -0.64
CCDC47-202ENST00000403162 UQCR11O14957 56 aa11.05□□□□□ -0.64
CCDC47-202ENST00000403162 Q5VSD8 79 aa11.05□□□□□ -0.64
CCDC47-202ENST00000403162 SPINK1P00995 79 aa11.04□□□□□ -0.64
CCDC47-202ENST00000403162 MIR22HGQ0VDD5 57 aa11.03□□□□□ -0.64
CCDC47-202ENST00000403162 TYMSOSQ8TAI1 123 aa11.02□□□□□ -0.65
CCDC47-202ENST00000403162 KRTAP17-1Q9BYP8 105 aa11□□□□□ -0.65
CCDC47-202ENST00000403162 Q8N1X5 172 aa10.98□□□□□ -0.65
CCDC47-202ENST00000403162 RPS29P62273 56 aaKnown RBP10.92□□□□□ -0.66
CCDC47-202ENST00000403162 BIRC6Q9NR09 4857 aa10.92□□□□□ -0.66
CCDC47-202ENST00000403162 PRAC1Q96KF2 57 aa10.9□□□□□ -0.66
CCDC47-202ENST00000403162 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
CCDC47-202ENST00000403162 ADM2Q7Z4H4 148 aa10.86□□□□□ -0.67
CCDC47-202ENST00000403162 PKHD1L1Q86WI1 4243 aa10.86□□□□□ -0.67
CCDC47-202ENST00000403162 KRTAP4-5Q9BYR2 181 aa10.79□□□□□ -0.68
CCDC47-202ENST00000403162 A8MUU9 505 aa10.75□□□□□ -0.69
CCDC47-202ENST00000403162 C20orf166-AS1Q96NR2 134 aa10.75□□□□□ -0.69
CCDC47-202ENST00000403162 HERC2O95714 4834 aa10.72□□□□□ -0.69
CCDC47-202ENST00000403162 FLG2Q5D862 2391 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-202ENST00000403162 LRP1Q07954 4544 aaKnown RBP10.68□□□□□ -0.7
CCDC47-202ENST00000403162 C9orf92A6NGG3 77 aa10.66□□□□□ -0.7
CCDC47-202ENST00000403162 LINC01554Q52M75 96 aa10.66□□□□□ -0.7
CCDC47-202ENST00000403162 KRTAP3-1Q9BYR8 98 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms