RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 TRAV7A0A075B6U4 112 aa7.59□□□□□ -1.2
CEACAM1-206ENST00000403136 IGHV6-1A0A0B4J1U7 121 aa7.59□□□□□ -1.2
CEACAM1-206ENST00000403136 KRTAP29-1A8MX34 341 aaPredicted RBP7.59□□□□□ -1.2
CEACAM1-206ENST00000403136 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
CEACAM1-206ENST00000403136 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
CEACAM1-206ENST00000403136 CASC2Q6XLA1 102 aa7.58□□□□□ -1.2
CEACAM1-206ENST00000403136 UQCRQO14949 82 aa7.57□□□□□ -1.2
CEACAM1-206ENST00000403136 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
CEACAM1-206ENST00000403136 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
CEACAM1-206ENST00000403136 OCR1Q9BZK8 76 aa7.56□□□□□ -1.2
CEACAM1-206ENST00000403136 hDV103S1A0JD37 113 aa7.54□□□□□ -1.2
CEACAM1-206ENST00000403136 LRP1Q07954 4544 aaKnown RBP7.54□□□□□ -1.2
CEACAM1-206ENST00000403136 NOTCH2NLQ7Z3S9 236 aa7.54□□□□□ -1.2
CEACAM1-206ENST00000403136 C8orf87E5RJ46 101 aa7.51□□□□□ -1.21
CEACAM1-206ENST00000403136 TNXBP22105 4242 aa7.5□□□□□ -1.21
CEACAM1-206ENST00000403136 FLG2Q5D862 2391 aaPredicted RBP7.5□□□□□ -1.21
CEACAM1-206ENST00000403136 FAT3Q8TDW7 4589 aa7.5□□□□□ -1.21
CEACAM1-206ENST00000403136 LINC00313P59037 77 aa7.49□□□□□ -1.21
CEACAM1-206ENST00000403136 TMEM254Q8TBM7 123 aa7.48□□□□□ -1.21
CEACAM1-206ENST00000403136 MRPL34Q9BQ48 92 aaKnown RBP7.48□□□□□ -1.21
CEACAM1-206ENST00000403136 C20orf197Q8N268 126 aa7.47□□□□□ -1.21
CEACAM1-206ENST00000403136 C5orf47Q569G3 176 aa7.44□□□□□ -1.22
CEACAM1-206ENST00000403136 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
CEACAM1-206ENST00000403136 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
CEACAM1-206ENST00000403136 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
CEACAM1-206ENST00000403136 NDUFS5O43920 106 aa7.42□□□□□ -1.22
CEACAM1-206ENST00000403136 DMBT1Q9UGM3 2413 aaPredicted RBP7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 BIRC6Q9NR09 4857 aa7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 KLKP1Q107X0 134 aa7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 OXTP01178 125 aa7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 CYSTM1Q9H1C7 97 aa7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
CEACAM1-206ENST00000403136 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.23
CEACAM1-206ENST00000403136 A0A0U1RQV1 116 aa7.39□□□□□ -1.23
CEACAM1-206ENST00000403136 Q8N9P0 234 aaPredicted RBP7.38□□□□□ -1.23
CEACAM1-206ENST00000403136 MP68P56378 58 aa7.38□□□□□ -1.23
CEACAM1-206ENST00000403136 H0Y9P7 68 aa7.36□□□□□ -1.23
CEACAM1-206ENST00000403136 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
CEACAM1-206ENST00000403136 ZCCHC13Q8WW36 166 aaKnown RBP7.34□□□□□ -1.23
CEACAM1-206ENST00000403136 H3BPC8 53 aa7.33□□□□□ -1.24
CEACAM1-206ENST00000403136 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
CEACAM1-206ENST00000403136 HERC2O95714 4834 aa7.33□□□□□ -1.24
CEACAM1-206ENST00000403136 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
CEACAM1-206ENST00000403136 H7BZZ5 65 aa7.32□□□□□ -1.24
CEACAM1-206ENST00000403136 NDUFC1O43677 76 aa7.32□□□□□ -1.24
CEACAM1-206ENST00000403136 Q5W150 140 aa7.32□□□□□ -1.24
CEACAM1-206ENST00000403136 FP248Q71RG6 208 aaPredicted RBP7.32□□□□□ -1.24
CEACAM1-206ENST00000403136 C1orf64Q8NEQ6 169 aa7.31□□□□□ -1.24
CEACAM1-206ENST00000403136 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
CEACAM1-206ENST00000403136 KRTAP13-3Q3SY46 172 aa7.28□□□□□ -1.24
CEACAM1-206ENST00000403136 TMEM258P61165 79 aa7.27□□□□□ -1.25
CEACAM1-206ENST00000403136 IGLV7-46A0A075B6I9 117 aa7.26□□□□□ -1.25
CEACAM1-206ENST00000403136 A8MUU9 505 aa7.25□□□□□ -1.25
CEACAM1-206ENST00000403136 C20orf166-AS1Q96NR2 134 aa7.25□□□□□ -1.25
CEACAM1-206ENST00000403136 LOC101927531A0A1B0GV80 90 aa7.22□□□□□ -1.25
CEACAM1-206ENST00000403136 J3QL48 77 aa7.2□□□□□ -1.26
CEACAM1-206ENST00000403136 PRR4Q16378 134 aa7.2□□□□□ -1.26
CEACAM1-206ENST00000403136 FAM236DA0A1B0GTK5 79 aa7.19□□□□□ -1.26
CEACAM1-206ENST00000403136 FAM236CP0DP71 79 aa7.19□□□□□ -1.26
CEACAM1-206ENST00000403136 Q75L30 129 aa7.18□□□□□ -1.26
CEACAM1-206ENST00000403136 CYP4F30PQ9H0H9 118 aa7.18□□□□□ -1.26
CEACAM1-206ENST00000403136 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
CEACAM1-206ENST00000403136 PCOTHQ58A44 107 aa7.17□□□□□ -1.26
CEACAM1-206ENST00000403136 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.27
CEACAM1-206ENST00000403136 XP32Q5T750 250 aa7.13□□□□□ -1.27
CEACAM1-206ENST00000403136 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
CEACAM1-206ENST00000403136 IGKV2D-30A0A075B6S6 120 aa7.12□□□□□ -1.27
CEACAM1-206ENST00000403136 TPRXLQ17RH7 258 aa7.11□□□□□ -1.27
CEACAM1-206ENST00000403136 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
CEACAM1-206ENST00000403136 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
CEACAM1-206ENST00000403136 RPS28P62857 69 aaKnown RBP7.08□□□□□ -1.28
CEACAM1-206ENST00000403136 C7orf65Q6ZTY9 151 aa7.08□□□□□ -1.28
CEACAM1-206ENST00000403136 HRES1P13985 223 aa7.07□□□□□ -1.28
CEACAM1-206ENST00000403136 SERP1Q9Y6X1 66 aa7.06□□□□□ -1.28
CEACAM1-206ENST00000403136 SPINK7P58062 85 aa7.03□□□□□ -1.28
CEACAM1-206ENST00000403136 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
CEACAM1-206ENST00000403136 LPAP08519 4548 aa6.99□□□□□ -1.29
CEACAM1-206ENST00000403136 LRP2P98164 4655 aa6.98□□□□□ -1.29
CEACAM1-206ENST00000403136 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
CEACAM1-206ENST00000403136 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
CEACAM1-206ENST00000403136 ACYP2P14621 99 aa6.93□□□□□ -1.3
CEACAM1-206ENST00000403136 COA5Q86WW8 74 aa6.92□□□□□ -1.3
CEACAM1-206ENST00000403136 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
CEACAM1-206ENST00000403136 HERC1Q15751 4861 aa6.88□□□□□ -1.31
CEACAM1-206ENST00000403136 A8MUN3 132 aa6.87□□□□□ -1.31
CEACAM1-206ENST00000403136 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
CEACAM1-206ENST00000403136 KRTAP3-1Q9BYR8 98 aa6.86□□□□□ -1.31
CEACAM1-206ENST00000403136 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
CEACAM1-206ENST00000403136 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
CEACAM1-206ENST00000403136 CHKB-CPT1BH3BT56 60 aa6.81□□□□□ -1.32
CEACAM1-206ENST00000403136 MUC17Q685J3 4493 aa6.77□□□□□ -1.33
CEACAM1-206ENST00000403136 MPLKIPQ8TAP9 179 aa6.77□□□□□ -1.33
CEACAM1-206ENST00000403136 Q1T7F1 81 aa6.74□□□□□ -1.33
CEACAM1-206ENST00000403136 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
CEACAM1-206ENST00000403136 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
CEACAM1-206ENST00000403136 V9GYY9 64 aa6.71□□□□□ -1.34
CEACAM1-206ENST00000403136 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
CEACAM1-206ENST00000403136 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms