RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 KALRNO60229 2985 aa9.27□□□□□ -0.93
TSC2-204ENST00000401874 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
TSC2-204ENST00000401874 BOD1L1Q8NFC6 3051 aa9.25□□□□□ -0.93
TSC2-204ENST00000401874 ITPR2Q14571 2701 aa9.24□□□□□ -0.93
TSC2-204ENST00000401874 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
TSC2-204ENST00000401874 ITPR1Q14643 2758 aa9.23□□□□□ -0.93
TSC2-204ENST00000401874 A8MUU9 505 aa9.22□□□□□ -0.93
TSC2-204ENST00000401874 NBEAQ8NFP9 2946 aa9.21□□□□□ -0.93
TSC2-204ENST00000401874 KMT2BQ9UMN6 2715 aaPredicted RBP9.2□□□□□ -0.94
TSC2-204ENST00000401874 C20orf166-AS1Q96NR2 134 aa9.18□□□□□ -0.94
TSC2-204ENST00000401874 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
TSC2-204ENST00000401874 STAB2Q8WWQ8 2551 aa9.17□□□□□ -0.94
TSC2-204ENST00000401874 FLG2Q5D862 2391 aaPredicted RBP9.17□□□□□ -0.94
TSC2-204ENST00000401874 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
TSC2-204ENST00000401874 BAHCC1Q9P281 2608 aa9.14□□□□□ -0.95
TSC2-204ENST00000401874 BSNQ9UPA5 3926 aa9.13□□□□□ -0.95
TSC2-204ENST00000401874 ATMQ13315 3056 aa9.13□□□□□ -0.95
TSC2-204ENST00000401874 DMXL2Q8TDJ6 3036 aa9.12□□□□□ -0.95
TSC2-204ENST00000401874 CFAP47Q6ZTR5 3102 aa9.12□□□□□ -0.95
TSC2-204ENST00000401874 FLNCQ14315 2725 aa9.11□□□□□ -0.95
TSC2-204ENST00000401874 LRBAP50851 2863 aa9.11□□□□□ -0.95
TSC2-204ENST00000401874 NDUFAF8A1L188 74 aa9.1□□□□□ -0.95
TSC2-204ENST00000401874 ADGRG4Q8IZF6 3080 aa9.09□□□□□ -0.95
TSC2-204ENST00000401874 LAMA5O15230 3695 aa9.08□□□□□ -0.96
TSC2-204ENST00000401874 APCP25054 2843 aa9.05□□□□□ -0.96
TSC2-204ENST00000401874 UTP20O75691 2785 aaKnown RBP9.05□□□□□ -0.96
TSC2-204ENST00000401874 HRNRQ86YZ3 2850 aaPredicted RBP9.03□□□□□ -0.96
TSC2-204ENST00000401874 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
TSC2-204ENST00000401874 SMG1Q96Q15 3661 aaKnown RBP9.02□□□□□ -0.97
TSC2-204ENST00000401874 ZZEF1O43149 2961 aa9.01□□□□□ -0.97
TSC2-204ENST00000401874 COL12A1Q99715 3063 aa9.01□□□□□ -0.97
TSC2-204ENST00000401874 TACC2O95359 2948 aa9.01□□□□□ -0.97
TSC2-204ENST00000401874 NIPBLQ6KC79 2804 aaeCLIP8.94□□□□□ -0.98
TSC2-204ENST00000401874 HIVEP1P15822 2718 aa8.92□□□□□ -0.98
TSC2-204ENST00000401874 KRTAP21-3Q3LHN1 58 aa8.92□□□□□ -0.98
TSC2-204ENST00000401874 ASH1LQ9NR48 2969 aaKnown RBP8.89□□□□□ -0.99
TSC2-204ENST00000401874 TNP1P09430 55 aa8.88□□□□□ -0.99
TSC2-204ENST00000401874 H0YAA0 97 aa8.88□□□□□ -0.99
TSC2-204ENST00000401874 DCHS1Q96JQ0 3298 aa8.87□□□□□ -0.99
TSC2-204ENST00000401874 XP32Q5T750 250 aa8.85□□□□□ -0.99
TSC2-204ENST00000401874 DCHS2Q6V1P9 2916 aa8.85□□□□□ -0.99
TSC2-204ENST00000401874 RELNP78509 3460 aa8.83□□□□□ -1
TSC2-204ENST00000401874 PP632Q6XCG6 107 aa8.78□□□□□ -1
TSC2-204ENST00000401874 CELSR2Q9HCU4 2923 aa8.75□□□□□ -1.01
TSC2-204ENST00000401874 ZANQ9Y493 2812 aa8.73□□□□□ -1.01
TSC2-204ENST00000401874 C10orf95Q9H7T3 257 aa8.73□□□□□ -1.01
TSC2-204ENST00000401874 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.01
TSC2-204ENST00000401874 CSMD1Q96PZ7 3565 aa8.68□□□□□ -1.02
TSC2-204ENST00000401874 TPRXLQ17RH7 258 aa8.66□□□□□ -1.02
TSC2-204ENST00000401874 P0C880 135 aa8.63□□□□□ -1.03
TSC2-204ENST00000401874 TENM4Q6N022 2769 aa8.61□□□□□ -1.03
TSC2-204ENST00000401874 SVEP1Q4LDE5 3571 aa8.56□□□□□ -1.04
TSC2-204ENST00000401874 CRYBG3Q68DQ2 2970 aa8.53□□□□□ -1.04
TSC2-204ENST00000401874 FBN2P35556 2912 aa8.53□□□□□ -1.04
TSC2-204ENST00000401874 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
TSC2-204ENST00000401874 VPS13CQ709C8 3753 aa8.47□□□□□ -1.05
TSC2-204ENST00000401874 ZFHX3Q15911 3703 aa8.46□□□□□ -1.06
TSC2-204ENST00000401874 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
TSC2-204ENST00000401874 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
TSC2-204ENST00000401874 NF1P21359 2839 aa8.42□□□□□ -1.06
TSC2-204ENST00000401874 MXRA5Q9NR99 2828 aa8.39□□□□□ -1.07
TSC2-204ENST00000401874 TGP01266 2768 aa8.34□□□□□ -1.07
TSC2-204ENST00000401874 ANK3Q12955 4377 aaKnown RBP8.33□□□□□ -1.08
TSC2-204ENST00000401874 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
TSC2-204ENST00000401874 CSMD2Q7Z408 3487 aa8.31□□□□□ -1.08
TSC2-204ENST00000401874 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
TSC2-204ENST00000401874 PDZD2O15018 2839 aa8.29□□□□□ -1.08
TSC2-204ENST00000401874 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
TSC2-204ENST00000401874 KRTAP10-10P60014 251 aa8.26□□□□□ -1.09
TSC2-204ENST00000401874 TENM1Q9UKZ4 2725 aa8.24□□□□□ -1.09
TSC2-204ENST00000401874 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
TSC2-204ENST00000401874 PRO2289Q9P1D8 64 aa8.2□□□□□ -1.1
TSC2-204ENST00000401874 TENM2Q9NT68 2774 aa8.2□□□□□ -1.1
TSC2-204ENST00000401874 NBPF19A0A087WUL8 3843 aa8.2□□□□□ -1.1
TSC2-204ENST00000401874 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
TSC2-204ENST00000401874 ZNF469Q96JG9 3925 aaPredicted RBP8.15□□□□□ -1.1
TSC2-204ENST00000401874 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
TSC2-204ENST00000401874 CUBNO60494 3623 aa8.01□□□□□ -1.13
TSC2-204ENST00000401874 KRTAP10-6P60371 365 aaPredicted RBP8□□□□□ -1.13
TSC2-204ENST00000401874 OTOGQ6ZRI0 2925 aa7.95□□□□□ -1.14
TSC2-204ENST00000401874 VWFP04275 2813 aa7.84□□□□□ -1.15
TSC2-204ENST00000401874 PKD1L1Q8TDX9 2849 aa7.82□□□□□ -1.16
TSC2-204ENST00000401874 TRRAPQ9Y4A5 3859 aa7.75□□□□□ -1.17
TSC2-204ENST00000401874 KRTAP3-2Q9BYR7 98 aa7.73□□□□□ -1.17
TSC2-204ENST00000401874 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
TSC2-204ENST00000401874 FBN1P35555 2871 aaKnown RBP7.67□□□□□ -1.18
TSC2-204ENST00000401874 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
TSC2-204ENST00000401874 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
TSC2-204ENST00000401874 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
TSC2-204ENST00000401874 CMYA5Q8N3K9 4069 aa7.63□□□□□ -1.19
TSC2-204ENST00000401874 HUWE1Q7Z6Z7 4374 aaKnown RBP7.63□□□□□ -1.19
TSC2-204ENST00000401874 DNAH3Q8TD57 4116 aa7.61□□□□□ -1.19
TSC2-204ENST00000401874 KRTAP10-4P60372 401 aaPredicted RBP7.57□□□□□ -1.2
TSC2-204ENST00000401874 MEGF8Q7Z7M0 2845 aa7.55□□□□□ -1.2
TSC2-204ENST00000401874 INE1O15225 51 aa7.5□□□□□ -1.21
TSC2-204ENST00000401874 DNAH1Q9P2D7 4330 aa7.45□□□□□ -1.22
TSC2-204ENST00000401874 ANK2Q01484 3957 aa7.44□□□□□ -1.22
TSC2-204ENST00000401874 SRRM2Q9UQ35 2752 aaKnown RBP7.44□□□□□ -1.22
TSC2-204ENST00000401874 DNAH9Q9NYC9 4486 aa7.41□□□□□ -1.22
TSC2-204ENST00000401874 KRTAP23-1A1A580 65 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms