RNA–Protein interactions for RNA: ENST00000401766.6

SLC6A4-203, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLC6A4, Length 6,543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-203ENST00000401766 A0A087X002 238 aa6.69□□□□□ -1.34
SLC6A4-203ENST00000401766 LINC00472Q9H8W2 130 aa6.69□□□□□ -1.34
SLC6A4-203ENST00000401766 IGSF10Q6WRI0 2623 aa6.69□□□□□ -1.34
SLC6A4-203ENST00000401766 RELNP78509 3460 aa6.69□□□□□ -1.34
SLC6A4-203ENST00000401766 CYSTM1Q9H1C7 97 aa6.68□□□□□ -1.34
SLC6A4-203ENST00000401766 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
SLC6A4-203ENST00000401766 Q5XG85 94 aa6.66□□□□□ -1.34
SLC6A4-203ENST00000401766 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
SLC6A4-203ENST00000401766 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
SLC6A4-203ENST00000401766 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
SLC6A4-203ENST00000401766 SMG1Q96Q15 3661 aaKnown RBP6.65□□□□□ -1.34
SLC6A4-203ENST00000401766 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
SLC6A4-203ENST00000401766 A8MUU9 505 aa6.63□□□□□ -1.35
SLC6A4-203ENST00000401766 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
SLC6A4-203ENST00000401766 Q5VV11 94 aa6.61□□□□□ -1.35
SLC6A4-203ENST00000401766 FBN2P35556 2912 aa6.61□□□□□ -1.35
SLC6A4-203ENST00000401766 CELSR1Q9NYQ6 3014 aa6.6□□□□□ -1.35
SLC6A4-203ENST00000401766 CSMD1Q96PZ7 3565 aa6.59□□□□□ -1.36
SLC6A4-203ENST00000401766 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
SLC6A4-203ENST00000401766 MXRA5Q9NR99 2828 aa6.58□□□□□ -1.36
SLC6A4-203ENST00000401766 CRYBG3Q68DQ2 2970 aa6.58□□□□□ -1.36
SLC6A4-203ENST00000401766 UBR5O95071 2799 aaPredicted RBP6.57□□□□□ -1.36
SLC6A4-203ENST00000401766 UTP20O75691 2785 aaKnown RBP6.56□□□□□ -1.36
SLC6A4-203ENST00000401766 APCP25054 2843 aa6.53□□□□□ -1.36
SLC6A4-203ENST00000401766 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
SLC6A4-203ENST00000401766 CUBNO60494 3623 aa6.52□□□□□ -1.37
SLC6A4-203ENST00000401766 SVEP1Q4LDE5 3571 aa6.52□□□□□ -1.37
SLC6A4-203ENST00000401766 Q6ZRN7 208 aaPredicted RBP6.51□□□□□ -1.37
SLC6A4-203ENST00000401766 CELSR2Q9HCU4 2923 aa6.51□□□□□ -1.37
SLC6A4-203ENST00000401766 SPENQ96T58 3664 aaKnown RBP6.5□□□□□ -1.37
SLC6A4-203ENST00000401766 KRTAP4-16G5E9R7 235 aaPredicted RBP6.49□□□□□ -1.37
SLC6A4-203ENST00000401766 P0C880 135 aa6.49□□□□□ -1.37
SLC6A4-203ENST00000401766 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
SLC6A4-203ENST00000401766 ITPR2Q14571 2701 aa6.45□□□□□ -1.38
SLC6A4-203ENST00000401766 ROMO1P60602 79 aa6.45□□□□□ -1.38
SLC6A4-203ENST00000401766 TENM4Q6N022 2769 aa6.45□□□□□ -1.38
SLC6A4-203ENST00000401766 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
SLC6A4-203ENST00000401766 KMT2BQ9UMN6 2715 aaPredicted RBP6.4□□□□□ -1.39
SLC6A4-203ENST00000401766 TNP1P09430 55 aa6.39□□□□□ -1.39
SLC6A4-203ENST00000401766 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
SLC6A4-203ENST00000401766 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
SLC6A4-203ENST00000401766 H3BS24 57 aa6.37□□□□□ -1.39
SLC6A4-203ENST00000401766 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
SLC6A4-203ENST00000401766 XP32Q5T750 250 aa6.34□□□□□ -1.39
SLC6A4-203ENST00000401766 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
SLC6A4-203ENST00000401766 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
SLC6A4-203ENST00000401766 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
SLC6A4-203ENST00000401766 NSD1Q96L73 2696 aaPredicted RBP6.3□□□□□ -1.4
SLC6A4-203ENST00000401766 HIVEP1P15822 2718 aa6.27□□□□□ -1.41
SLC6A4-203ENST00000401766 KRTAP7-1Q8IUC3 87 aa6.27□□□□□ -1.41
SLC6A4-203ENST00000401766 A6NN06 94 aa6.26□□□□□ -1.41
SLC6A4-203ENST00000401766 VWFP04275 2813 aa6.23□□□□□ -1.41
SLC6A4-203ENST00000401766 A8MU10 97 aa6.19□□□□□ -1.42
SLC6A4-203ENST00000401766 PDZD2O15018 2839 aa6.19□□□□□ -1.42
SLC6A4-203ENST00000401766 KRTAP13-1Q8IUC0 172 aa6.19□□□□□ -1.42
SLC6A4-203ENST00000401766 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.43
SLC6A4-203ENST00000401766 TENM1Q9UKZ4 2725 aa6.13□□□□□ -1.43
SLC6A4-203ENST00000401766 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
SLC6A4-203ENST00000401766 PKD1L1Q8TDX9 2849 aa6.08□□□□□ -1.44
SLC6A4-203ENST00000401766 CSMD2Q7Z408 3487 aa6.08□□□□□ -1.44
SLC6A4-203ENST00000401766 TENM3Q9P273 2699 aa6.07□□□□□ -1.44
SLC6A4-203ENST00000401766 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
SLC6A4-203ENST00000401766 TENM2Q9NT68 2774 aa6.03□□□□□ -1.44
SLC6A4-203ENST00000401766 FBN1P35555 2871 aaKnown RBP6.03□□□□□ -1.44
SLC6A4-203ENST00000401766 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
SLC6A4-203ENST00000401766 KRTAP16-1A8MUX0 517 aa6.02□□□□□ -1.45
SLC6A4-203ENST00000401766 BSNQ9UPA5 3926 aa6.01□□□□□ -1.45
SLC6A4-203ENST00000401766 OTOGQ6ZRI0 2925 aa6□□□□□ -1.45
SLC6A4-203ENST00000401766 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
SLC6A4-203ENST00000401766 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
SLC6A4-203ENST00000401766 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
SLC6A4-203ENST00000401766 H0YAA0 97 aa5.88□□□□□ -1.47
SLC6A4-203ENST00000401766 SRRM2Q9UQ35 2752 aaKnown RBP5.88□□□□□ -1.47
SLC6A4-203ENST00000401766 VPS13CQ709C8 3753 aa5.86□□□□□ -1.47
SLC6A4-203ENST00000401766 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
SLC6A4-203ENST00000401766 ZFHX3Q15911 3703 aa5.8□□□□□ -1.48
SLC6A4-203ENST00000401766 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
SLC6A4-203ENST00000401766 COL7A1Q02388 2944 aa5.71□□□□□ -1.5
SLC6A4-203ENST00000401766 FBN3Q75N90 2809 aa5.71□□□□□ -1.5
SLC6A4-203ENST00000401766 TGP01266 2768 aa5.69□□□□□ -1.5
SLC6A4-203ENST00000401766 TRRAPQ9Y4A5 3859 aa5.63□□□□□ -1.51
SLC6A4-203ENST00000401766 NBPF19A0A087WUL8 3843 aa5.62□□□□□ -1.51
SLC6A4-203ENST00000401766 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
SLC6A4-203ENST00000401766 KRTAP8-1Q8IUC2 63 aa5.57□□□□□ -1.52
SLC6A4-203ENST00000401766 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
SLC6A4-203ENST00000401766 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
SLC6A4-203ENST00000401766 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
SLC6A4-203ENST00000401766 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
SLC6A4-203ENST00000401766 MEGF8Q7Z7M0 2845 aa5.37□□□□□ -1.55
SLC6A4-203ENST00000401766 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
SLC6A4-203ENST00000401766 AKAP9Q99996 3911 aa5.35□□□□□ -1.55
SLC6A4-203ENST00000401766 KRTAP13-4Q3LI77 160 aa5.34□□□□□ -1.55
SLC6A4-203ENST00000401766 CSMD3Q7Z407 3707 aa5.34□□□□□ -1.56
SLC6A4-203ENST00000401766 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.56
SLC6A4-203ENST00000401766 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
SLC6A4-203ENST00000401766 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
SLC6A4-203ENST00000401766 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
SLC6A4-203ENST00000401766 SPRR2EP22531 72 aa5.28□□□□□ -1.56
SLC6A4-203ENST00000401766 SPRR2BP35325 72 aa5.28□□□□□ -1.56
SLC6A4-203ENST00000401766 SPRR2AP35326 72 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms