RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 MMP24-AS1A0A0U1RRL7 71 aa14.68□□□□□ -0.06
CPNE1-205ENST00000401607 C1orf195Q5TG92 126 aa14.68□□□□□ -0.06
CPNE1-205ENST00000401607 OCR1Q9BZK8 76 aa14.66□□□□□ -0.06
CPNE1-205ENST00000401607 SPAG11AQ6PDA7 123 aa14.64□□□□□ -0.07
CPNE1-205ENST00000401607 CASC2Q6XLA1 102 aa14.64□□□□□ -0.07
CPNE1-205ENST00000401607 IGHV6-1A0A0B4J1U7 121 aa14.63□□□□□ -0.07
CPNE1-205ENST00000401607 RPS29P62273 56 aaKnown RBP14.62□□□□□ -0.07
CPNE1-205ENST00000401607 C8orf17Q9NRJ1 99 aa14.62□□□□□ -0.07
CPNE1-205ENST00000401607 Q8N1X5 172 aa14.6□□□□□ -0.07
CPNE1-205ENST00000401607 NOTCH2NLQ7Z3S9 236 aa14.57□□□□□ -0.08
CPNE1-205ENST00000401607 hDV103S1A0JD37 113 aa14.56□□□□□ -0.08
CPNE1-205ENST00000401607 LRP1Q07954 4544 aaKnown RBP14.5□□□□□ -0.09
CPNE1-205ENST00000401607 KRTAP10-8P60410 259 aa14.49□□□□□ -0.09
CPNE1-205ENST00000401607 C20orf197Q8N268 126 aa14.48□□□□□ -0.09
CPNE1-205ENST00000401607 TNXBP22105 4242 aa14.47□□□□□ -0.09
CPNE1-205ENST00000401607 FAT3Q8TDW7 4589 aa14.47□□□□□ -0.09
CPNE1-205ENST00000401607 CYSTM1Q9H1C7 97 aa14.47□□□□□ -0.09
CPNE1-205ENST00000401607 C8orf87E5RJ46 101 aa14.45□□□□□ -0.1
CPNE1-205ENST00000401607 TMEM254Q8TBM7 123 aa14.45□□□□□ -0.1
CPNE1-205ENST00000401607 MRPL34Q9BQ48 92 aaKnown RBP14.43□□□□□ -0.1
CPNE1-205ENST00000401607 LINC00313P59037 77 aa14.39□□□□□ -0.11
CPNE1-205ENST00000401607 KLKP1Q107X0 134 aa14.38□□□□□ -0.11
CPNE1-205ENST00000401607 SNURFQ9Y675 71 aa14.38□□□□□ -0.11
CPNE1-205ENST00000401607 A0A0U1RQV1 116 aa14.34□□□□□ -0.11
CPNE1-205ENST00000401607 C5orf47Q569G3 176 aa14.34□□□□□ -0.11
CPNE1-205ENST00000401607 KRTAP16-1A8MUX0 517 aa14.31□□□□□ -0.12
CPNE1-205ENST00000401607 NDUFS5O43920 106 aa14.31□□□□□ -0.12
CPNE1-205ENST00000401607 TP53AIP1Q9HCN2 124 aa14.3□□□□□ -0.12
CPNE1-205ENST00000401607 FLG2Q5D862 2391 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-205ENST00000401607 MT1HL1P0DM35 61 aa14.29□□□□□ -0.12
CPNE1-205ENST00000401607 KRTAP4-5Q9BYR2 181 aa14.29□□□□□ -0.12
CPNE1-205ENST00000401607 RETNLBQ9BQ08 111 aa14.29□□□□□ -0.12
CPNE1-205ENST00000401607 H0Y9P7 68 aa14.25□□□□□ -0.13
CPNE1-205ENST00000401607 Q8N9P0 234 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-205ENST00000401607 ZCCHC13Q8WW36 166 aaKnown RBP14.24□□□□□ -0.13
CPNE1-205ENST00000401607 TRAV22A0A0B4J277 110 aa14.23□□□□□ -0.13
CPNE1-205ENST00000401607 H7BZZ5 65 aa14.23□□□□□ -0.13
CPNE1-205ENST00000401607 MP68P56378 58 aa14.23□□□□□ -0.13
CPNE1-205ENST00000401607 MYCBP2O75592 4640 aa14.22□□□□□ -0.13
CPNE1-205ENST00000401607 BIRC6Q9NR09 4857 aa14.2□□□□□ -0.14
CPNE1-205ENST00000401607 LINC00208Q96KT6 92 aa14.18□□□□□ -0.14
CPNE1-205ENST00000401607 NDUFC1O43677 76 aa14.16□□□□□ -0.14
CPNE1-205ENST00000401607 H3BPC8 53 aa14.15□□□□□ -0.14
CPNE1-205ENST00000401607 OXTP01178 125 aa14.15□□□□□ -0.14
CPNE1-205ENST00000401607 TMEM258P61165 79 aa14.14□□□□□ -0.15
CPNE1-205ENST00000401607 Q5W150 140 aa14.14□□□□□ -0.15
CPNE1-205ENST00000401607 KRTAP13-3Q3SY46 172 aa14.12□□□□□ -0.15
CPNE1-205ENST00000401607 C1orf64Q8NEQ6 169 aa14.11□□□□□ -0.15
CPNE1-205ENST00000401607 C9orf92A6NGG3 77 aa14.1□□□□□ -0.15
CPNE1-205ENST00000401607 HERC2O95714 4834 aa14.07□□□□□ -0.16
CPNE1-205ENST00000401607 FP248Q71RG6 208 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-205ENST00000401607 DMBT1Q9UGM3 2413 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-205ENST00000401607 ABCA13Q86UQ4 5058 aa14□□□□□ -0.17
CPNE1-205ENST00000401607 FAM236DA0A1B0GTK5 79 aa13.99□□□□□ -0.17
CPNE1-205ENST00000401607 FAM236CP0DP71 79 aa13.99□□□□□ -0.17
CPNE1-205ENST00000401607 C20orf166-AS1Q96NR2 134 aa13.97□□□□□ -0.17
CPNE1-205ENST00000401607 A8MUU9 505 aa13.96□□□□□ -0.18
CPNE1-205ENST00000401607 LOC101927531A0A1B0GV80 90 aa13.94□□□□□ -0.18
CPNE1-205ENST00000401607 IGLV7-46A0A075B6I9 117 aa13.93□□□□□ -0.18
CPNE1-205ENST00000401607 PCOTHQ58A44 107 aa13.88□□□□□ -0.19
CPNE1-205ENST00000401607 ATP5EP56381 51 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-205ENST00000401607 CYP4F30PQ9H0H9 118 aa13.86□□□□□ -0.19
CPNE1-205ENST00000401607 IGKV2-30P06310 120 aa13.84□□□□□ -0.19
CPNE1-205ENST00000401607 Q75L30 129 aa13.82□□□□□ -0.2
CPNE1-205ENST00000401607 PRR4Q16378 134 aa13.81□□□□□ -0.2
CPNE1-205ENST00000401607 SPANXA2-OT1Q8N9U9 137 aa13.8□□□□□ -0.2
CPNE1-205ENST00000401607 J3QL48 77 aa13.75□□□□□ -0.21
CPNE1-205ENST00000401607 XP32Q5T750 250 aa13.75□□□□□ -0.21
CPNE1-205ENST00000401607 IGKV2D-30A0A075B6S6 120 aa13.74□□□□□ -0.21
CPNE1-205ENST00000401607 RPS28P62857 69 aaKnown RBP13.71□□□□□ -0.22
CPNE1-205ENST00000401607 SERP1Q9Y6X1 66 aa13.71□□□□□ -0.22
CPNE1-205ENST00000401607 RPL37P61927 97 aaKnown RBP13.68□□□□□ -0.22
CPNE1-205ENST00000401607 TPRXLQ17RH7 258 aa13.66□□□□□ -0.22
CPNE1-205ENST00000401607 HRES1P13985 223 aa13.66□□□□□ -0.22
CPNE1-205ENST00000401607 C7orf65Q6ZTY9 151 aa13.65□□□□□ -0.22
CPNE1-205ENST00000401607 ATP11AUNQ6ZP68 121 aa13.58□□□□□ -0.23
CPNE1-205ENST00000401607 SPINK7P58062 85 aa13.52□□□□□ -0.25
CPNE1-205ENST00000401607 LPAP08519 4548 aa13.5□□□□□ -0.25
CPNE1-205ENST00000401607 DMAC1Q96GE9 116 aa13.46□□□□□ -0.25
CPNE1-205ENST00000401607 PCLOQ9Y6V0 5065 aa13.43□□□□□ -0.26
CPNE1-205ENST00000401607 COA5Q86WW8 74 aa13.43□□□□□ -0.26
CPNE1-205ENST00000401607 LRP2P98164 4655 aa13.41□□□□□ -0.26
CPNE1-205ENST00000401607 C4orf26Q17RF5 130 aa13.38□□□□□ -0.27
CPNE1-205ENST00000401607 ACYP2P14621 99 aa13.35□□□□□ -0.27
CPNE1-205ENST00000401607 SMIM26A0A096LP01 95 aa13.35□□□□□ -0.27
CPNE1-205ENST00000401607 KRTAP3-1Q9BYR8 98 aa13.25□□□□□ -0.29
CPNE1-205ENST00000401607 A8MUN3 132 aa13.24□□□□□ -0.29
CPNE1-205ENST00000401607 COX6B2Q6YFQ2 88 aa13.2□□□□□ -0.3
CPNE1-205ENST00000401607 SEC61BP60468 96 aaKnown RBP13.15□□□□□ -0.3
CPNE1-205ENST00000401607 HERC1Q15751 4861 aa13.15□□□□□ -0.3
CPNE1-205ENST00000401607 MPLKIPQ8TAP9 179 aa13.15□□□□□ -0.31
CPNE1-205ENST00000401607 CHKB-CPT1BH3BT56 60 aa13.14□□□□□ -0.31
CPNE1-205ENST00000401607 MUC17Q685J3 4493 aa13.08□□□□□ -0.32
CPNE1-205ENST00000401607 HMCN2Q8NDA2 5059 aa13.08□□□□□ -0.32
CPNE1-205ENST00000401607 Q1T7F1 81 aa13.08□□□□□ -0.32
CPNE1-205ENST00000401607 KRTAP4-1Q9BYQ7 146 aa12.98□□□□□ -0.33
CPNE1-205ENST00000401607 V9GYY9 64 aa12.97□□□□□ -0.33
CPNE1-205ENST00000401607 LINC01558Q9Y6Z2 57 aa12.92□□□□□ -0.34
CPNE1-205ENST00000401607 RBM12B-AS1Q9P1G2 102 aa12.88□□□□□ -0.35
CPNE1-205ENST00000401607 PSPHP1O15172 72 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms