RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 CELSR2Q9HCU4 2923 aa7.6□□□□□ -1.19
LDLRAD4-203ENST00000399848 NBEAQ8NFP9 2946 aa7.59□□□□□ -1.2
LDLRAD4-203ENST00000399848 TACC2O95359 2948 aa7.58□□□□□ -1.2
LDLRAD4-203ENST00000399848 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
LDLRAD4-203ENST00000399848 TNP1P09430 55 aa7.56□□□□□ -1.2
LDLRAD4-203ENST00000399848 DNAH14Q0VDD8 3507 aa7.55□□□□□ -1.2
LDLRAD4-203ENST00000399848 LAMA1P25391 3075 aa7.55□□□□□ -1.2
LDLRAD4-203ENST00000399848 TNRC18O15417 2968 aaPredicted RBP7.53□□□□□ -1.2
LDLRAD4-203ENST00000399848 NF1P21359 2839 aa7.52□□□□□ -1.21
LDLRAD4-203ENST00000399848 NIPBLQ6KC79 2804 aaeCLIP7.52□□□□□ -1.21
LDLRAD4-203ENST00000399848 BOD1L1Q8NFC6 3051 aa7.51□□□□□ -1.21
LDLRAD4-203ENST00000399848 ZZEF1O43149 2961 aa7.51□□□□□ -1.21
LDLRAD4-203ENST00000399848 COL6A3P12111 3177 aa7.5□□□□□ -1.21
LDLRAD4-203ENST00000399848 TENM4Q6N022 2769 aa7.48□□□□□ -1.21
LDLRAD4-203ENST00000399848 CDH23Q9H251 3354 aa7.48□□□□□ -1.21
LDLRAD4-203ENST00000399848 C10orf95Q9H7T3 257 aa7.48□□□□□ -1.21
LDLRAD4-203ENST00000399848 KRTAP11-1Q8IUC1 163 aa7.47□□□□□ -1.21
LDLRAD4-203ENST00000399848 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.22
LDLRAD4-203ENST00000399848 USP34Q70CQ2 3546 aa7.45□□□□□ -1.22
LDLRAD4-203ENST00000399848 PP632Q6XCG6 107 aa7.45□□□□□ -1.22
LDLRAD4-203ENST00000399848 ADGRG4Q8IZF6 3080 aa7.43□□□□□ -1.22
LDLRAD4-203ENST00000399848 KRTAP13-1Q8IUC0 172 aa7.43□□□□□ -1.22
LDLRAD4-203ENST00000399848 KRTAP13-2Q52LG2 175 aa7.42□□□□□ -1.22
LDLRAD4-203ENST00000399848 DCHS2Q6V1P9 2916 aa7.4□□□□□ -1.22
LDLRAD4-203ENST00000399848 VCANP13611 3396 aa7.4□□□□□ -1.22
LDLRAD4-203ENST00000399848 TENM3Q9P273 2699 aa7.39□□□□□ -1.23
LDLRAD4-203ENST00000399848 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
LDLRAD4-203ENST00000399848 ATMQ13315 3056 aa7.36□□□□□ -1.23
LDLRAD4-203ENST00000399848 CFAP47Q6ZTR5 3102 aa7.36□□□□□ -1.23
LDLRAD4-203ENST00000399848 TGP01266 2768 aa7.32□□□□□ -1.24
LDLRAD4-203ENST00000399848 P0C880 135 aa7.31□□□□□ -1.24
LDLRAD4-203ENST00000399848 DMXL1Q9Y485 3027 aa7.29□□□□□ -1.24
LDLRAD4-203ENST00000399848 ZANQ9Y493 2812 aa7.29□□□□□ -1.24
LDLRAD4-203ENST00000399848 SPEGQ15772 3267 aa7.28□□□□□ -1.24
LDLRAD4-203ENST00000399848 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
LDLRAD4-203ENST00000399848 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
LDLRAD4-203ENST00000399848 PDZD2O15018 2839 aa7.23□□□□□ -1.25
LDLRAD4-203ENST00000399848 FBN2P35556 2912 aa7.22□□□□□ -1.25
LDLRAD4-203ENST00000399848 CELSR1Q9NYQ6 3014 aa7.21□□□□□ -1.26
LDLRAD4-203ENST00000399848 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
LDLRAD4-203ENST00000399848 H0YAA0 97 aa7.16□□□□□ -1.26
LDLRAD4-203ENST00000399848 SZT2Q5T011 3432 aa7.13□□□□□ -1.27
LDLRAD4-203ENST00000399848 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
LDLRAD4-203ENST00000399848 XP32Q5T750 250 aa7.11□□□□□ -1.27
LDLRAD4-203ENST00000399848 EYSQ5T1H1 3165 aa7.09□□□□□ -1.27
LDLRAD4-203ENST00000399848 HRNRQ86YZ3 2850 aaPredicted RBP7.06□□□□□ -1.28
LDLRAD4-203ENST00000399848 VWFP04275 2813 aa7.05□□□□□ -1.28
LDLRAD4-203ENST00000399848 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
LDLRAD4-203ENST00000399848 SPTBN5Q9NRC6 3674 aaKnown RBP7.01□□□□□ -1.29
LDLRAD4-203ENST00000399848 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
LDLRAD4-203ENST00000399848 MXRA5Q9NR99 2828 aa6.99□□□□□ -1.29
LDLRAD4-203ENST00000399848 NBPF19A0A087WUL8 3843 aa6.98□□□□□ -1.29
LDLRAD4-203ENST00000399848 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
LDLRAD4-203ENST00000399848 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
LDLRAD4-203ENST00000399848 WDFY3Q8IZQ1 3526 aa6.88□□□□□ -1.31
LDLRAD4-203ENST00000399848 LOC400499M0QZD8 3231 aa6.86□□□□□ -1.31
LDLRAD4-203ENST00000399848 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
LDLRAD4-203ENST00000399848 ZFHX4Q86UP3 3567 aa6.79□□□□□ -1.32
LDLRAD4-203ENST00000399848 SRRM2Q9UQ35 2752 aaKnown RBP6.78□□□□□ -1.32
LDLRAD4-203ENST00000399848 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
LDLRAD4-203ENST00000399848 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
LDLRAD4-203ENST00000399848 ASPMQ8IZT6 3477 aa6.71□□□□□ -1.34
LDLRAD4-203ENST00000399848 KRTAP13-4Q3LI77 160 aa6.7□□□□□ -1.34
LDLRAD4-203ENST00000399848 KRTAP12-2P59991 146 aa6.68□□□□□ -1.34
LDLRAD4-203ENST00000399848 LAMA5O15230 3695 aa6.65□□□□□ -1.34
LDLRAD4-203ENST00000399848 MEGF8Q7Z7M0 2845 aa6.61□□□□□ -1.35
LDLRAD4-203ENST00000399848 FBN3Q75N90 2809 aa6.57□□□□□ -1.36
LDLRAD4-203ENST00000399848 RELNP78509 3460 aa6.56□□□□□ -1.36
LDLRAD4-203ENST00000399848 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
LDLRAD4-203ENST00000399848 DCHS1Q96JQ0 3298 aa6.54□□□□□ -1.36
LDLRAD4-203ENST00000399848 FBN1P35555 2871 aaKnown RBP6.53□□□□□ -1.36
LDLRAD4-203ENST00000399848 CSMD1Q96PZ7 3565 aa6.51□□□□□ -1.37
LDLRAD4-203ENST00000399848 SMG1Q96Q15 3661 aaKnown RBP6.48□□□□□ -1.37
LDLRAD4-203ENST00000399848 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
LDLRAD4-203ENST00000399848 SPENQ96T58 3664 aaKnown RBP6.43□□□□□ -1.38
LDLRAD4-203ENST00000399848 INE1O15225 51 aa6.36□□□□□ -1.39
LDLRAD4-203ENST00000399848 DMDP11532 3685 aa6.35□□□□□ -1.39
LDLRAD4-203ENST00000399848 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
LDLRAD4-203ENST00000399848 TRRAPQ9Y4A5 3859 aa6.27□□□□□ -1.41
LDLRAD4-203ENST00000399848 OTOGQ6ZRI0 2925 aa6.26□□□□□ -1.41
LDLRAD4-203ENST00000399848 CUBNO60494 3623 aa6.24□□□□□ -1.41
LDLRAD4-203ENST00000399848 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
LDLRAD4-203ENST00000399848 SVEP1Q4LDE5 3571 aa6.19□□□□□ -1.42
LDLRAD4-203ENST00000399848 VPS13CQ709C8 3753 aa6.14□□□□□ -1.43
LDLRAD4-203ENST00000399848 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
LDLRAD4-203ENST00000399848 MUC3AQ02505 3323 aa6.11□□□□□ -1.43
LDLRAD4-203ENST00000399848 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
LDLRAD4-203ENST00000399848 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
LDLRAD4-203ENST00000399848 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.46
LDLRAD4-203ENST00000399848 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
LDLRAD4-203ENST00000399848 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
LDLRAD4-203ENST00000399848 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.46
LDLRAD4-203ENST00000399848 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.47
LDLRAD4-203ENST00000399848 CSMD2Q7Z408 3487 aa5.89□□□□□ -1.47
LDLRAD4-203ENST00000399848 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
LDLRAD4-203ENST00000399848 AKAP9Q99996 3911 aa5.86□□□□□ -1.47
LDLRAD4-203ENST00000399848 BSNQ9UPA5 3926 aa5.86□□□□□ -1.47
LDLRAD4-203ENST00000399848 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
LDLRAD4-203ENST00000399848 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
LDLRAD4-203ENST00000399848 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms