RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
CACNA1C-216ENST00000399638 LAMA5O15230 3695 aa6.37□□□□□ -1.39
CACNA1C-216ENST00000399638 A6NN06 94 aa6.35□□□□□ -1.39
CACNA1C-216ENST00000399638 FRYQ5TBA9 3013 aa6.35□□□□□ -1.39
CACNA1C-216ENST00000399638 HIVEP1P15822 2718 aa6.34□□□□□ -1.39
CACNA1C-216ENST00000399638 A0A1B0GVY2 172 aa6.34□□□□□ -1.39
CACNA1C-216ENST00000399638 KRTAP21-3Q3LHN1 58 aa6.34□□□□□ -1.4
CACNA1C-216ENST00000399638 PANO1I0J062 215 aa6.33□□□□□ -1.4
CACNA1C-216ENST00000399638 ITPR1Q14643 2758 aa6.31□□□□□ -1.4
CACNA1C-216ENST00000399638 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
CACNA1C-216ENST00000399638 FLNCQ14315 2725 aa6.29□□□□□ -1.4
CACNA1C-216ENST00000399638 LOC400499M0QZD8 3231 aa6.29□□□□□ -1.4
CACNA1C-216ENST00000399638 TENM4Q6N022 2769 aa6.28□□□□□ -1.4
CACNA1C-216ENST00000399638 LRBAP50851 2863 aa6.27□□□□□ -1.41
CACNA1C-216ENST00000399638 KRTAP10-8P60410 259 aa6.27□□□□□ -1.41
CACNA1C-216ENST00000399638 COL12A1Q99715 3063 aa6.25□□□□□ -1.41
CACNA1C-216ENST00000399638 ATMQ13315 3056 aa6.24□□□□□ -1.41
CACNA1C-216ENST00000399638 TNP1P09430 55 aa6.24□□□□□ -1.41
CACNA1C-216ENST00000399638 CSMD1Q96PZ7 3565 aa6.24□□□□□ -1.41
CACNA1C-216ENST00000399638 RELNP78509 3460 aa6.24□□□□□ -1.41
CACNA1C-216ENST00000399638 TACC2O95359 2948 aa6.24□□□□□ -1.41
CACNA1C-216ENST00000399638 UTP20O75691 2785 aaKnown RBP6.23□□□□□ -1.41
CACNA1C-216ENST00000399638 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
CACNA1C-216ENST00000399638 ADGRG4Q8IZF6 3080 aa6.21□□□□□ -1.42
CACNA1C-216ENST00000399638 DMXL2Q8TDJ6 3036 aa6.21□□□□□ -1.42
CACNA1C-216ENST00000399638 KALRNO60229 2985 aa6.21□□□□□ -1.42
CACNA1C-216ENST00000399638 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
CACNA1C-216ENST00000399638 ITPR2Q14571 2701 aa6.19□□□□□ -1.42
CACNA1C-216ENST00000399638 TENM3Q9P273 2699 aa6.18□□□□□ -1.42
CACNA1C-216ENST00000399638 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
CACNA1C-216ENST00000399638 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.42
CACNA1C-216ENST00000399638 SMG1Q96Q15 3661 aaKnown RBP6.15□□□□□ -1.43
CACNA1C-216ENST00000399638 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
CACNA1C-216ENST00000399638 CRYBG3Q68DQ2 2970 aa6.12□□□□□ -1.43
CACNA1C-216ENST00000399638 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
CACNA1C-216ENST00000399638 PRO2289Q9P1D8 64 aa6.09□□□□□ -1.43
CACNA1C-216ENST00000399638 ASH1LQ9NR48 2969 aaKnown RBP6.09□□□□□ -1.44
CACNA1C-216ENST00000399638 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
CACNA1C-216ENST00000399638 SVEP1Q4LDE5 3571 aa6.08□□□□□ -1.44
CACNA1C-216ENST00000399638 SPENQ96T58 3664 aaKnown RBP6.08□□□□□ -1.44
CACNA1C-216ENST00000399638 KRTAP7-1Q8IUC3 87 aa6.07□□□□□ -1.44
CACNA1C-216ENST00000399638 NBEAQ8NFP9 2946 aa6.07□□□□□ -1.44
CACNA1C-216ENST00000399638 Q6ZRN7 208 aaPredicted RBP6.06□□□□□ -1.44
CACNA1C-216ENST00000399638 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
CACNA1C-216ENST00000399638 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
CACNA1C-216ENST00000399638 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
CACNA1C-216ENST00000399638 CELSR2Q9HCU4 2923 aa6□□□□□ -1.45
CACNA1C-216ENST00000399638 APCP25054 2843 aa5.98□□□□□ -1.45
CACNA1C-216ENST00000399638 CUBNO60494 3623 aa5.94□□□□□ -1.46
CACNA1C-216ENST00000399638 ZZEF1O43149 2961 aa5.93□□□□□ -1.46
CACNA1C-216ENST00000399638 XP32Q5T750 250 aa5.92□□□□□ -1.46
CACNA1C-216ENST00000399638 DCHS2Q6V1P9 2916 aa5.9□□□□□ -1.46
CACNA1C-216ENST00000399638 PP632Q6XCG6 107 aa5.9□□□□□ -1.47
CACNA1C-216ENST00000399638 NF1P21359 2839 aa5.88□□□□□ -1.47
CACNA1C-216ENST00000399638 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
CACNA1C-216ENST00000399638 TENM2Q9NT68 2774 aa5.86□□□□□ -1.47
CACNA1C-216ENST00000399638 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
CACNA1C-216ENST00000399638 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
CACNA1C-216ENST00000399638 TENM1Q9UKZ4 2725 aa5.83□□□□□ -1.48
CACNA1C-216ENST00000399638 CSMD2Q7Z408 3487 aa5.82□□□□□ -1.48
CACNA1C-216ENST00000399638 ZANQ9Y493 2812 aa5.79□□□□□ -1.48
CACNA1C-216ENST00000399638 BSNQ9UPA5 3926 aa5.78□□□□□ -1.48
CACNA1C-216ENST00000399638 VPS13CQ709C8 3753 aa5.75□□□□□ -1.49
CACNA1C-216ENST00000399638 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
CACNA1C-216ENST00000399638 PKD1L1Q8TDX9 2849 aa5.71□□□□□ -1.5
CACNA1C-216ENST00000399638 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
CACNA1C-216ENST00000399638 HRNRQ86YZ3 2850 aaPredicted RBP5.67□□□□□ -1.5
CACNA1C-216ENST00000399638 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
CACNA1C-216ENST00000399638 CELSR1Q9NYQ6 3014 aa5.65□□□□□ -1.5
CACNA1C-216ENST00000399638 PDZD2O15018 2839 aa5.64□□□□□ -1.51
CACNA1C-216ENST00000399638 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
CACNA1C-216ENST00000399638 H0YAA0 97 aa5.61□□□□□ -1.51
CACNA1C-216ENST00000399638 VWFP04275 2813 aa5.57□□□□□ -1.52
CACNA1C-216ENST00000399638 FBN2P35556 2912 aa5.57□□□□□ -1.52
CACNA1C-216ENST00000399638 TGP01266 2768 aa5.56□□□□□ -1.52
CACNA1C-216ENST00000399638 MXRA5Q9NR99 2828 aa5.53□□□□□ -1.52
CACNA1C-216ENST00000399638 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
CACNA1C-216ENST00000399638 ANK3Q12955 4377 aaKnown RBP5.4□□□□□ -1.55
CACNA1C-216ENST00000399638 TRRAPQ9Y4A5 3859 aa5.38□□□□□ -1.55
CACNA1C-216ENST00000399638 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
CACNA1C-216ENST00000399638 AKAP9Q99996 3911 aa5.34□□□□□ -1.55
CACNA1C-216ENST00000399638 CSMD3Q7Z407 3707 aa5.33□□□□□ -1.56
CACNA1C-216ENST00000399638 FBN1P35555 2871 aaKnown RBP5.28□□□□□ -1.56
CACNA1C-216ENST00000399638 FBN3Q75N90 2809 aa5.27□□□□□ -1.57
CACNA1C-216ENST00000399638 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
CACNA1C-216ENST00000399638 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
CACNA1C-216ENST00000399638 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
CACNA1C-216ENST00000399638 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
CACNA1C-216ENST00000399638 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
CACNA1C-216ENST00000399638 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
CACNA1C-216ENST00000399638 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.59
CACNA1C-216ENST00000399638 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
CACNA1C-216ENST00000399638 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
CACNA1C-216ENST00000399638 OTOGQ6ZRI0 2925 aa5.04□□□□□ -1.6
CACNA1C-216ENST00000399638 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
CACNA1C-216ENST00000399638 MEGF8Q7Z7M0 2845 aa5.02□□□□□ -1.61
CACNA1C-216ENST00000399638 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
CACNA1C-216ENST00000399638 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
CACNA1C-216ENST00000399638 KRTAP8-1Q8IUC2 63 aa4.98□□□□□ -1.61
CACNA1C-216ENST00000399638 INE1O15225 51 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms