RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 COL12A1Q99715 3063 aa7.06□□□□□ -1.28
CACNA1C-209ENST00000399603 CENPEQ02224 2701 aa7.06□□□□□ -1.28
CACNA1C-209ENST00000399603 CFAP46Q8IYW2 2715 aa7.06□□□□□ -1.28
CACNA1C-209ENST00000399603 BAHCC1Q9P281 2608 aa7.05□□□□□ -1.28
CACNA1C-209ENST00000399603 MGAQ8IWI9 3026 aa7.05□□□□□ -1.28
CACNA1C-209ENST00000399603 ATMQ13315 3056 aa7.04□□□□□ -1.28
CACNA1C-209ENST00000399603 LRBAP50851 2863 aa7.04□□□□□ -1.28
CACNA1C-209ENST00000399603 VPS13CQ709C8 3753 aa7.03□□□□□ -1.28
CACNA1C-209ENST00000399603 CSMD2Q7Z408 3487 aa7.02□□□□□ -1.29
CACNA1C-209ENST00000399603 TRANK1O15050 2925 aa7.02□□□□□ -1.29
CACNA1C-209ENST00000399603 KALRNO60229 2985 aa7.02□□□□□ -1.29
CACNA1C-209ENST00000399603 TEP1Q99973 2627 aaKnown RBP7.01□□□□□ -1.29
CACNA1C-209ENST00000399603 CUBNO60494 3623 aa7□□□□□ -1.29
CACNA1C-209ENST00000399603 PP632Q6XCG6 107 aa7□□□□□ -1.29
CACNA1C-209ENST00000399603 ASH1LQ9NR48 2969 aaKnown RBP6.99□□□□□ -1.29
CACNA1C-209ENST00000399603 DSPP15924 2871 aaKnown RBP6.98□□□□□ -1.29
CACNA1C-209ENST00000399603 DMXL2Q8TDJ6 3036 aa6.98□□□□□ -1.29
CACNA1C-209ENST00000399603 IGSF10Q6WRI0 2623 aa6.94□□□□□ -1.3
CACNA1C-209ENST00000399603 TNRC18O15417 2968 aaPredicted RBP6.94□□□□□ -1.3
CACNA1C-209ENST00000399603 DMXL1Q9Y485 3027 aa6.93□□□□□ -1.3
CACNA1C-209ENST00000399603 BSNQ9UPA5 3926 aa6.93□□□□□ -1.3
CACNA1C-209ENST00000399603 SETXQ7Z333 2677 aaKnown RBP6.92□□□□□ -1.3
CACNA1C-209ENST00000399603 MAP1AP78559 2803 aaPredicted RBP6.91□□□□□ -1.3
CACNA1C-209ENST00000399603 COL6A5A8TX70 2615 aa6.91□□□□□ -1.3
CACNA1C-209ENST00000399603 A0A1B0GVY2 172 aa6.9□□□□□ -1.3
CACNA1C-209ENST00000399603 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.31
CACNA1C-209ENST00000399603 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
CACNA1C-209ENST00000399603 NOTCH1P46531 2555 aa6.88□□□□□ -1.31
CACNA1C-209ENST00000399603 CHD6Q8TD26 2715 aa6.86□□□□□ -1.31
CACNA1C-209ENST00000399603 NSD1Q96L73 2696 aaPredicted RBP6.8□□□□□ -1.32
CACNA1C-209ENST00000399603 TEX15Q9BXT5 2789 aa6.78□□□□□ -1.32
CACNA1C-209ENST00000399603 NBEAQ8NFP9 2946 aa6.78□□□□□ -1.32
CACNA1C-209ENST00000399603 TACC2O95359 2948 aa6.77□□□□□ -1.33
CACNA1C-209ENST00000399603 ZZEF1O43149 2961 aa6.77□□□□□ -1.33
CACNA1C-209ENST00000399603 UBR5O95071 2799 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-209ENST00000399603 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
CACNA1C-209ENST00000399603 GCN1Q92616 2671 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-209ENST00000399603 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-209ENST00000399603 H0YAA0 97 aa6.71□□□□□ -1.34
CACNA1C-209ENST00000399603 KMT2BQ9UMN6 2715 aaPredicted RBP6.7□□□□□ -1.34
CACNA1C-209ENST00000399603 KRTAP13-1Q8IUC0 172 aa6.69□□□□□ -1.34
CACNA1C-209ENST00000399603 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
CACNA1C-209ENST00000399603 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
CACNA1C-209ENST00000399603 CRYBG3Q68DQ2 2970 aa6.65□□□□□ -1.34
CACNA1C-209ENST00000399603 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
CACNA1C-209ENST00000399603 ITPR1Q14643 2758 aa6.62□□□□□ -1.35
CACNA1C-209ENST00000399603 FLNCQ14315 2725 aa6.6□□□□□ -1.35
CACNA1C-209ENST00000399603 CELSR1Q9NYQ6 3014 aa6.58□□□□□ -1.36
CACNA1C-209ENST00000399603 KRTAP21-3Q3LHN1 58 aa6.55□□□□□ -1.36
CACNA1C-209ENST00000399603 HIVEP1P15822 2718 aa6.54□□□□□ -1.36
CACNA1C-209ENST00000399603 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
CACNA1C-209ENST00000399603 AKAP9Q99996 3911 aa6.48□□□□□ -1.37
CACNA1C-209ENST00000399603 XP32Q5T750 250 aa6.47□□□□□ -1.37
CACNA1C-209ENST00000399603 TENM4Q6N022 2769 aa6.46□□□□□ -1.37
CACNA1C-209ENST00000399603 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
CACNA1C-209ENST00000399603 UTP20O75691 2785 aaKnown RBP6.35□□□□□ -1.39
CACNA1C-209ENST00000399603 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
CACNA1C-209ENST00000399603 ITPR2Q14571 2701 aa6.33□□□□□ -1.4
CACNA1C-209ENST00000399603 APCP25054 2843 aa6.33□□□□□ -1.4
CACNA1C-209ENST00000399603 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
CACNA1C-209ENST00000399603 NIPBLQ6KC79 2804 aaeCLIP6.3□□□□□ -1.4
CACNA1C-209ENST00000399603 DCHS2Q6V1P9 2916 aa6.26□□□□□ -1.41
CACNA1C-209ENST00000399603 CSMD3Q7Z407 3707 aa6.24□□□□□ -1.41
CACNA1C-209ENST00000399603 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
CACNA1C-209ENST00000399603 KRTAP13-4Q3LI77 160 aa6.22□□□□□ -1.41
CACNA1C-209ENST00000399603 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
CACNA1C-209ENST00000399603 ZANQ9Y493 2812 aa6.15□□□□□ -1.42
CACNA1C-209ENST00000399603 CELSR2Q9HCU4 2923 aa6.13□□□□□ -1.43
CACNA1C-209ENST00000399603 HRNRQ86YZ3 2850 aaPredicted RBP6.12□□□□□ -1.43
CACNA1C-209ENST00000399603 TENM2Q9NT68 2774 aa6.11□□□□□ -1.43
CACNA1C-209ENST00000399603 FBN2P35556 2912 aa6.1□□□□□ -1.43
CACNA1C-209ENST00000399603 KRTAP13-3Q3SY46 172 aa6.1□□□□□ -1.43
CACNA1C-209ENST00000399603 INE1O15225 51 aa6.09□□□□□ -1.43
CACNA1C-209ENST00000399603 KRTAP12-1P59990 96 aa6.09□□□□□ -1.44
CACNA1C-209ENST00000399603 TRRAPQ9Y4A5 3859 aa6.07□□□□□ -1.44
CACNA1C-209ENST00000399603 NF1P21359 2839 aa6.03□□□□□ -1.44
CACNA1C-209ENST00000399603 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
CACNA1C-209ENST00000399603 TGP01266 2768 aa5.96□□□□□ -1.45
CACNA1C-209ENST00000399603 MXRA5Q9NR99 2828 aa5.87□□□□□ -1.47
CACNA1C-209ENST00000399603 TENM1Q9UKZ4 2725 aa5.87□□□□□ -1.47
CACNA1C-209ENST00000399603 LYSTQ99698 3801 aa5.86□□□□□ -1.47
CACNA1C-209ENST00000399603 PDZD2O15018 2839 aa5.86□□□□□ -1.47
CACNA1C-209ENST00000399603 FRAS1Q86XX4 4008 aa5.83□□□□□ -1.48
CACNA1C-209ENST00000399603 OTOGQ6ZRI0 2925 aa5.78□□□□□ -1.48
CACNA1C-209ENST00000399603 ANK2Q01484 3957 aa5.78□□□□□ -1.48
CACNA1C-209ENST00000399603 CMYA5Q8N3K9 4069 aa5.77□□□□□ -1.49
CACNA1C-209ENST00000399603 KRTAP10-6P60371 365 aaPredicted RBP5.76□□□□□ -1.49
CACNA1C-209ENST00000399603 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
CACNA1C-209ENST00000399603 ANK3Q12955 4377 aaKnown RBP5.73□□□□□ -1.49
CACNA1C-209ENST00000399603 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
CACNA1C-209ENST00000399603 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
CACNA1C-209ENST00000399603 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
CACNA1C-209ENST00000399603 PKD1L1Q8TDX9 2849 aa5.7□□□□□ -1.5
CACNA1C-209ENST00000399603 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
CACNA1C-209ENST00000399603 FBN1P35555 2871 aaKnown RBP5.66□□□□□ -1.5
CACNA1C-209ENST00000399603 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
CACNA1C-209ENST00000399603 VWFP04275 2813 aa5.6□□□□□ -1.51
CACNA1C-209ENST00000399603 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
CACNA1C-209ENST00000399603 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
CACNA1C-209ENST00000399603 FBN3Q75N90 2809 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms