RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 DNAH6Q9C0G6 4158 aa8.08□□□□□ -1.12
PTPN6-202ENST00000399448 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
PTPN6-202ENST00000399448 TGP01266 2768 aa8.06□□□□□ -1.12
PTPN6-202ENST00000399448 NDUFS5O43920 106 aa8.05□□□□□ -1.12
PTPN6-202ENST00000399448 FRAS1Q86XX4 4008 aa8.05□□□□□ -1.12
PTPN6-202ENST00000399448 Q1T7F1 81 aa8.04□□□□□ -1.12
PTPN6-202ENST00000399448 A0A087X002 238 aa8.04□□□□□ -1.12
PTPN6-202ENST00000399448 Q6ZSA8 131 aa8.04□□□□□ -1.12
PTPN6-202ENST00000399448 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
PTPN6-202ENST00000399448 SPINK6Q6UWN8 80 aa8.03□□□□□ -1.12
PTPN6-202ENST00000399448 KRTAP10-1P60331 282 aa8.02□□□□□ -1.13
PTPN6-202ENST00000399448 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
PTPN6-202ENST00000399448 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
PTPN6-202ENST00000399448 ALMS1Q8TCU4 4167 aa7.98□□□□□ -1.13
PTPN6-202ENST00000399448 PCOTHQ58A44 107 aa7.98□□□□□ -1.13
PTPN6-202ENST00000399448 DNAH11Q96DT5 4516 aa7.97□□□□□ -1.13
PTPN6-202ENST00000399448 C8orf87E5RJ46 101 aa7.97□□□□□ -1.13
PTPN6-202ENST00000399448 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
PTPN6-202ENST00000399448 LOC101927531A0A1B0GV80 90 aa7.91□□□□□ -1.14
PTPN6-202ENST00000399448 COA5Q86WW8 74 aa7.91□□□□□ -1.14
PTPN6-202ENST00000399448 Q5W150 140 aa7.91□□□□□ -1.14
PTPN6-202ENST00000399448 KRTAP13-3Q3SY46 172 aa7.9□□□□□ -1.14
PTPN6-202ENST00000399448 PSPHP1O15172 72 aa7.9□□□□□ -1.15
PTPN6-202ENST00000399448 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.15
PTPN6-202ENST00000399448 LINC00313P59037 77 aa7.9□□□□□ -1.15
PTPN6-202ENST00000399448 PKD1P98161 4303 aa7.9□□□□□ -1.15
PTPN6-202ENST00000399448 Q8N9P0 234 aaPredicted RBP7.89□□□□□ -1.15
PTPN6-202ENST00000399448 LIMD2Q9BT23 127 aa7.87□□□□□ -1.15
PTPN6-202ENST00000399448 FAT2Q9NYQ8 4349 aa7.87□□□□□ -1.15
PTPN6-202ENST00000399448 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
PTPN6-202ENST00000399448 LRP1BQ9NZR2 4599 aa7.85□□□□□ -1.15
PTPN6-202ENST00000399448 A8MUN3 132 aa7.85□□□□□ -1.15
PTPN6-202ENST00000399448 HYDINQ4G0P3 5121 aa7.84□□□□□ -1.16
PTPN6-202ENST00000399448 PLA2G1BP04054 148 aaKnown RBP7.83□□□□□ -1.16
PTPN6-202ENST00000399448 FAM229AH3BQW9 127 aa7.82□□□□□ -1.16
PTPN6-202ENST00000399448 HRES1P13985 223 aa7.81□□□□□ -1.16
PTPN6-202ENST00000399448 Q5VV11 94 aa7.81□□□□□ -1.16
PTPN6-202ENST00000399448 TYMSOSQ8TAI1 123 aa7.8□□□□□ -1.16
PTPN6-202ENST00000399448 KRTAP16-1A8MUX0 517 aa7.79□□□□□ -1.16
PTPN6-202ENST00000399448 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
PTPN6-202ENST00000399448 SPINK1P00995 79 aa7.78□□□□□ -1.16
PTPN6-202ENST00000399448 RBM12B-AS1Q9P1G2 102 aa7.77□□□□□ -1.17
PTPN6-202ENST00000399448 KTN1-AS1Q86SY8 53 aa7.76□□□□□ -1.17
PTPN6-202ENST00000399448 IGKV2-30P06310 120 aa7.74□□□□□ -1.17
PTPN6-202ENST00000399448 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
PTPN6-202ENST00000399448 LINC01558Q9Y6Z2 57 aa7.74□□□□□ -1.17
PTPN6-202ENST00000399448 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
PTPN6-202ENST00000399448 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
PTPN6-202ENST00000399448 ACYP2P14621 99 aa7.73□□□□□ -1.17
PTPN6-202ENST00000399448 SPAG11AQ6PDA7 123 aa7.73□□□□□ -1.17
PTPN6-202ENST00000399448 Q75L30 129 aa7.73□□□□□ -1.17
PTPN6-202ENST00000399448 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
PTPN6-202ENST00000399448 RPS29P62273 56 aaKnown RBP7.7□□□□□ -1.18
PTPN6-202ENST00000399448 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
PTPN6-202ENST00000399448 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
PTPN6-202ENST00000399448 SMR3BP02814 79 aaPredicted RBP7.66□□□□□ -1.18
PTPN6-202ENST00000399448 A0A1B0GVY2 172 aa7.65□□□□□ -1.18
PTPN6-202ENST00000399448 A6NED7 52 aa7.64□□□□□ -1.19
PTPN6-202ENST00000399448 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
PTPN6-202ENST00000399448 IGKV2D-30A0A075B6S6 120 aa7.63□□□□□ -1.19
PTPN6-202ENST00000399448 A8MU10 97 aa7.61□□□□□ -1.19
PTPN6-202ENST00000399448 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
PTPN6-202ENST00000399448 LCA10Q71F78 164 aa7.59□□□□□ -1.19
PTPN6-202ENST00000399448 PKHD1P08F94 4074 aa7.59□□□□□ -1.2
PTPN6-202ENST00000399448 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.2
PTPN6-202ENST00000399448 DYNC1H1Q14204 4646 aaKnown RBP7.57□□□□□ -1.2
PTPN6-202ENST00000399448 CDC42SE1Q9NRR8 79 aa7.56□□□□□ -1.2
PTPN6-202ENST00000399448 A6NN06 94 aa7.54□□□□□ -1.2
PTPN6-202ENST00000399448 SPINK7P58062 85 aa7.53□□□□□ -1.2
PTPN6-202ENST00000399448 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
PTPN6-202ENST00000399448 H3BS24 57 aa7.52□□□□□ -1.21
PTPN6-202ENST00000399448 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
PTPN6-202ENST00000399448 A8MUU9 505 aa7.49□□□□□ -1.21
PTPN6-202ENST00000399448 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
PTPN6-202ENST00000399448 APOBP04114 4563 aaKnown RBP7.48□□□□□ -1.21
PTPN6-202ENST00000399448 A0A1B0GU69 56 aa7.47□□□□□ -1.21
PTPN6-202ENST00000399448 C9orf92A6NGG3 77 aa7.47□□□□□ -1.21
PTPN6-202ENST00000399448 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
PTPN6-202ENST00000399448 FAT1Q14517 4588 aa7.44□□□□□ -1.22
PTPN6-202ENST00000399448 Q8N1X5 172 aa7.43□□□□□ -1.22
PTPN6-202ENST00000399448 RYR2Q92736 4967 aa7.39□□□□□ -1.23
PTPN6-202ENST00000399448 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
PTPN6-202ENST00000399448 UQCR11O14957 56 aa7.33□□□□□ -1.24
PTPN6-202ENST00000399448 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
PTPN6-202ENST00000399448 KRTAP3-1Q9BYR8 98 aa7.3□□□□□ -1.24
PTPN6-202ENST00000399448 FLG2Q5D862 2391 aaPredicted RBP7.3□□□□□ -1.24
PTPN6-202ENST00000399448 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
PTPN6-202ENST00000399448 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
PTPN6-202ENST00000399448 Q5VSD8 79 aa7.28□□□□□ -1.24
PTPN6-202ENST00000399448 KMT2CQ8NEZ4 4911 aaKnown RBP7.25□□□□□ -1.25
PTPN6-202ENST00000399448 COX6B2Q6YFQ2 88 aa7.23□□□□□ -1.25
PTPN6-202ENST00000399448 TNXBP22105 4242 aa7.21□□□□□ -1.25
PTPN6-202ENST00000399448 FAT3Q8TDW7 4589 aa7.21□□□□□ -1.26
PTPN6-202ENST00000399448 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
PTPN6-202ENST00000399448 HSPG2P98160 4391 aa7.17□□□□□ -1.26
PTPN6-202ENST00000399448 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
PTPN6-202ENST00000399448 RYR3Q15413 4870 aa7.14□□□□□ -1.27
PTPN6-202ENST00000399448 PRAC1Q96KF2 57 aa7.13□□□□□ -1.27
PTPN6-202ENST00000399448 XP32Q5T750 250 aa7.13□□□□□ -1.27
PTPN6-202ENST00000399448 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 525.7 ms