RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SEC61BP60468 96 aaKnown RBP5.56□□□□□ -1.52
ATL3-201ENST00000398868 DMDP11532 3685 aa5.56□□□□□ -1.52
ATL3-201ENST00000398868 LINC00472Q9H8W2 130 aa5.55□□□□□ -1.52
ATL3-201ENST00000398868 STAB2Q8WWQ8 2551 aa5.54□□□□□ -1.52
ATL3-201ENST00000398868 A0A087X002 238 aa5.53□□□□□ -1.52
ATL3-201ENST00000398868 KMT2BQ9UMN6 2715 aaPredicted RBP5.53□□□□□ -1.52
ATL3-201ENST00000398868 UBR5O95071 2799 aaPredicted RBP5.53□□□□□ -1.52
ATL3-201ENST00000398868 HIVEP1P15822 2718 aa5.53□□□□□ -1.52
ATL3-201ENST00000398868 KRTAP26-1Q6PEX3 210 aa5.52□□□□□ -1.53
ATL3-201ENST00000398868 UTP20O75691 2785 aaKnown RBP5.52□□□□□ -1.53
ATL3-201ENST00000398868 PLAC4Q8WY50 150 aa5.51□□□□□ -1.53
ATL3-201ENST00000398868 IGSF10Q6WRI0 2623 aa5.5□□□□□ -1.53
ATL3-201ENST00000398868 CUBNO60494 3623 aa5.5□□□□□ -1.53
ATL3-201ENST00000398868 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
ATL3-201ENST00000398868 APCP25054 2843 aa5.5□□□□□ -1.53
ATL3-201ENST00000398868 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
ATL3-201ENST00000398868 A6NN06 94 aa5.48□□□□□ -1.53
ATL3-201ENST00000398868 ITPR1Q14643 2758 aa5.47□□□□□ -1.53
ATL3-201ENST00000398868 NSD1Q96L73 2696 aaPredicted RBP5.46□□□□□ -1.53
ATL3-201ENST00000398868 SPRR1AP35321 89 aa5.44□□□□□ -1.54
ATL3-201ENST00000398868 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
ATL3-201ENST00000398868 SPENQ96T58 3664 aaKnown RBP5.44□□□□□ -1.54
ATL3-201ENST00000398868 CELSR2Q9HCU4 2923 aa5.44□□□□□ -1.54
ATL3-201ENST00000398868 Q6ZR54 194 aa5.43□□□□□ -1.54
ATL3-201ENST00000398868 KRTAP11-1Q8IUC1 163 aa5.43□□□□□ -1.54
ATL3-201ENST00000398868 A0A1B0GVY2 172 aa5.41□□□□□ -1.54
ATL3-201ENST00000398868 SVEP1Q4LDE5 3571 aa5.39□□□□□ -1.55
ATL3-201ENST00000398868 SMG1Q96Q15 3661 aaKnown RBP5.39□□□□□ -1.55
ATL3-201ENST00000398868 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
ATL3-201ENST00000398868 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
ATL3-201ENST00000398868 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
ATL3-201ENST00000398868 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
ATL3-201ENST00000398868 CELSR1Q9NYQ6 3014 aa5.33□□□□□ -1.56
ATL3-201ENST00000398868 SPRR1BP22528 89 aa5.33□□□□□ -1.56
ATL3-201ENST00000398868 FLNCQ14315 2725 aa5.32□□□□□ -1.56
ATL3-201ENST00000398868 DCHS2Q6V1P9 2916 aa5.31□□□□□ -1.56
ATL3-201ENST00000398868 MUC3AQ02505 3323 aa5.31□□□□□ -1.56
ATL3-201ENST00000398868 A8MUU9 505 aa5.31□□□□□ -1.56
ATL3-201ENST00000398868 CSMD2Q7Z408 3487 aa5.25□□□□□ -1.57
ATL3-201ENST00000398868 KRTAP4-16G5E9R7 235 aaPredicted RBP5.24□□□□□ -1.57
ATL3-201ENST00000398868 TENM4Q6N022 2769 aa5.24□□□□□ -1.57
ATL3-201ENST00000398868 FBN2P35556 2912 aa5.24□□□□□ -1.57
ATL3-201ENST00000398868 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
ATL3-201ENST00000398868 Q6ZRN7 208 aaPredicted RBP5.2□□□□□ -1.58
ATL3-201ENST00000398868 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.58
ATL3-201ENST00000398868 KRTAP7-1Q8IUC3 87 aa5.19□□□□□ -1.58
ATL3-201ENST00000398868 PKD1L1Q8TDX9 2849 aa5.18□□□□□ -1.58
ATL3-201ENST00000398868 TENM1Q9UKZ4 2725 aa5.18□□□□□ -1.58
ATL3-201ENST00000398868 ZANQ9Y493 2812 aa5.17□□□□□ -1.58
ATL3-201ENST00000398868 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
ATL3-201ENST00000398868 VWFP04275 2813 aa5.15□□□□□ -1.58
ATL3-201ENST00000398868 NF1P21359 2839 aa5.15□□□□□ -1.59
ATL3-201ENST00000398868 TNP1P09430 55 aa5.1□□□□□ -1.59
ATL3-201ENST00000398868 TENM2Q9NT68 2774 aa5.09□□□□□ -1.59
ATL3-201ENST00000398868 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
ATL3-201ENST00000398868 HRNRQ86YZ3 2850 aaPredicted RBP5.05□□□□□ -1.6
ATL3-201ENST00000398868 H0YAA0 97 aa5.04□□□□□ -1.6
ATL3-201ENST00000398868 XP32Q5T750 250 aa4.99□□□□□ -1.61
ATL3-201ENST00000398868 P0C880 135 aa4.98□□□□□ -1.61
ATL3-201ENST00000398868 KRTAP13-1Q8IUC0 172 aa4.96□□□□□ -1.62
ATL3-201ENST00000398868 VPS13CQ709C8 3753 aa4.94□□□□□ -1.62
ATL3-201ENST00000398868 TENM3Q9P273 2699 aa4.94□□□□□ -1.62
ATL3-201ENST00000398868 MXRA5Q9NR99 2828 aa4.93□□□□□ -1.62
ATL3-201ENST00000398868 CSMD3Q7Z407 3707 aa4.92□□□□□ -1.62
ATL3-201ENST00000398868 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.62
ATL3-201ENST00000398868 TRRAPQ9Y4A5 3859 aa4.89□□□□□ -1.63
ATL3-201ENST00000398868 BSNQ9UPA5 3926 aa4.89□□□□□ -1.63
ATL3-201ENST00000398868 KRTAP1-4P0C5Y4 121 aa4.87□□□□□ -1.63
ATL3-201ENST00000398868 PDZD2O15018 2839 aa4.85□□□□□ -1.63
ATL3-201ENST00000398868 FBN1P35555 2871 aaKnown RBP4.85□□□□□ -1.63
ATL3-201ENST00000398868 KRTAP21-3Q3LHN1 58 aa4.85□□□□□ -1.63
ATL3-201ENST00000398868 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
ATL3-201ENST00000398868 TGP01266 2768 aa4.82□□□□□ -1.64
ATL3-201ENST00000398868 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
ATL3-201ENST00000398868 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
ATL3-201ENST00000398868 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
ATL3-201ENST00000398868 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
ATL3-201ENST00000398868 KRTAP13-3Q3SY46 172 aa4.72□□□□□ -1.65
ATL3-201ENST00000398868 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
ATL3-201ENST00000398868 CRCT1Q9UGL9 99 aa4.68□□□□□ -1.66
ATL3-201ENST00000398868 COL7A1Q02388 2944 aa4.68□□□□□ -1.66
ATL3-201ENST00000398868 ANK3Q12955 4377 aaKnown RBP4.66□□□□□ -1.66
ATL3-201ENST00000398868 ZNF469Q96JG9 3925 aaPredicted RBP4.61□□□□□ -1.67
ATL3-201ENST00000398868 OTOGQ6ZRI0 2925 aa4.58□□□□□ -1.68
ATL3-201ENST00000398868 FBN3Q75N90 2809 aa4.56□□□□□ -1.68
ATL3-201ENST00000398868 AKAP9Q99996 3911 aa4.56□□□□□ -1.68
ATL3-201ENST00000398868 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
ATL3-201ENST00000398868 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
ATL3-201ENST00000398868 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
ATL3-201ENST00000398868 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
ATL3-201ENST00000398868 HUWE1Q7Z6Z7 4374 aaKnown RBP4.47□□□□□ -1.69
ATL3-201ENST00000398868 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
ATL3-201ENST00000398868 LORP23490 312 aaPredicted RBP4.29□□□□□ -1.72
ATL3-201ENST00000398868 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
ATL3-201ENST00000398868 INE1O15225 51 aa4.28□□□□□ -1.72
ATL3-201ENST00000398868 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
ATL3-201ENST00000398868 FRAS1Q86XX4 4008 aa4.18□□□□□ -1.74
ATL3-201ENST00000398868 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
ATL3-201ENST00000398868 DNAH10Q8IVF4 4471 aa4.14□□□□□ -1.75
ATL3-201ENST00000398868 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms