RNA–Protein interactions for RNA: ENST00000398514.7

DPYSL3-202, Transcript of dihydropyrimidinase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DPYSL3, Length 5,309 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPYSL3-202ENST00000398514 SPEGQ15772 3267 aa10.5□□□□□ -0.73
DPYSL3-202ENST00000398514 TENM4Q6N022 2769 aa10.49□□□□□ -0.73
DPYSL3-202ENST00000398514 SPTBN5Q9NRC6 3674 aaKnown RBP10.48□□□□□ -0.73
DPYSL3-202ENST00000398514 ZANQ9Y493 2812 aa10.47□□□□□ -0.73
DPYSL3-202ENST00000398514 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
DPYSL3-202ENST00000398514 H1FX-AS1Q4G0G2 97 aa10.44□□□□□ -0.74
DPYSL3-202ENST00000398514 M0QZ58 72 aa10.41□□□□□ -0.74
DPYSL3-202ENST00000398514 DCHS2Q6V1P9 2916 aa10.4□□□□□ -0.74
DPYSL3-202ENST00000398514 ASB16-AS1Q495Z4 193 aa10.39□□□□□ -0.75
DPYSL3-202ENST00000398514 DMXL1Q9Y485 3027 aa10.39□□□□□ -0.75
DPYSL3-202ENST00000398514 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
DPYSL3-202ENST00000398514 KRTAP13-1Q8IUC0 172 aa10.39□□□□□ -0.75
DPYSL3-202ENST00000398514 KRTAP13-2Q52LG2 175 aa10.38□□□□□ -0.75
DPYSL3-202ENST00000398514 TNRC18O15417 2968 aaPredicted RBP10.38□□□□□ -0.75
DPYSL3-202ENST00000398514 USP34Q70CQ2 3546 aa10.38□□□□□ -0.75
DPYSL3-202ENST00000398514 ADM2Q7Z4H4 148 aa10.35□□□□□ -0.75
DPYSL3-202ENST00000398514 ROMO1P60602 79 aa10.32□□□□□ -0.76
DPYSL3-202ENST00000398514 RPS29P62273 56 aaKnown RBP10.3□□□□□ -0.76
DPYSL3-202ENST00000398514 A0A0A0MQY5 61 aa10.27□□□□□ -0.77
DPYSL3-202ENST00000398514 LOC400499M0QZD8 3231 aa10.25□□□□□ -0.77
DPYSL3-202ENST00000398514 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
DPYSL3-202ENST00000398514 FBN2P35556 2912 aa10.2□□□□□ -0.78
DPYSL3-202ENST00000398514 NF1P21359 2839 aa10.17□□□□□ -0.78
DPYSL3-202ENST00000398514 A8MU10 97 aa10.12□□□□□ -0.79
DPYSL3-202ENST00000398514 A6NN06 94 aa10.09□□□□□ -0.79
DPYSL3-202ENST00000398514 PLAC4Q8WY50 150 aa10.09□□□□□ -0.79
DPYSL3-202ENST00000398514 MYO15AQ9UKN7 3530 aa10.09□□□□□ -0.79
DPYSL3-202ENST00000398514 A8MUU9 505 aa10.04□□□□□ -0.8
DPYSL3-202ENST00000398514 KRTAP21-3Q3LHN1 58 aa10.04□□□□□ -0.8
DPYSL3-202ENST00000398514 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
DPYSL3-202ENST00000398514 TENM3Q9P273 2699 aa9.96□□□□□ -0.81
DPYSL3-202ENST00000398514 MUC3AQ02505 3323 aa9.93□□□□□ -0.82
DPYSL3-202ENST00000398514 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
DPYSL3-202ENST00000398514 TENM1Q9UKZ4 2725 aa9.91□□□□□ -0.82
DPYSL3-202ENST00000398514 KRTAP1-4P0C5Y4 121 aa9.91□□□□□ -0.82
DPYSL3-202ENST00000398514 KRTAP25-1Q3LHN0 102 aa9.88□□□□□ -0.83
DPYSL3-202ENST00000398514 RELNP78509 3460 aa9.87□□□□□ -0.83
DPYSL3-202ENST00000398514 MXRA5Q9NR99 2828 aa9.85□□□□□ -0.83
DPYSL3-202ENST00000398514 CELSR1Q9NYQ6 3014 aa9.85□□□□□ -0.83
DPYSL3-202ENST00000398514 DCHS1Q96JQ0 3298 aa9.81□□□□□ -0.84
DPYSL3-202ENST00000398514 TENM2Q9NT68 2774 aa9.79□□□□□ -0.84
DPYSL3-202ENST00000398514 WDFY3Q8IZQ1 3526 aa9.78□□□□□ -0.84
DPYSL3-202ENST00000398514 NDUFAF8A1L188 74 aa9.75□□□□□ -0.85
DPYSL3-202ENST00000398514 XP32Q5T750 250 aa9.75□□□□□ -0.85
DPYSL3-202ENST00000398514 PKD1L1Q8TDX9 2849 aa9.71□□□□□ -0.86
DPYSL3-202ENST00000398514 DMDP11532 3685 aa9.67□□□□□ -0.86
DPYSL3-202ENST00000398514 LAMA5O15230 3695 aa9.62□□□□□ -0.87
DPYSL3-202ENST00000398514 ZFHX4Q86UP3 3567 aa9.58□□□□□ -0.88
DPYSL3-202ENST00000398514 TNP1P09430 55 aa9.58□□□□□ -0.88
DPYSL3-202ENST00000398514 ASPMQ8IZT6 3477 aa9.58□□□□□ -0.88
DPYSL3-202ENST00000398514 VWFP04275 2813 aa9.54□□□□□ -0.88
DPYSL3-202ENST00000398514 TGP01266 2768 aa9.54□□□□□ -0.88
DPYSL3-202ENST00000398514 A0A1B0GVY2 172 aa9.53□□□□□ -0.88
DPYSL3-202ENST00000398514 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
DPYSL3-202ENST00000398514 PDZD2O15018 2839 aa9.49□□□□□ -0.89
DPYSL3-202ENST00000398514 H0YAA0 97 aa9.47□□□□□ -0.89
DPYSL3-202ENST00000398514 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
DPYSL3-202ENST00000398514 C10orf95Q9H7T3 257 aa9.43□□□□□ -0.9
DPYSL3-202ENST00000398514 FBN1P35555 2871 aaKnown RBP9.43□□□□□ -0.9
DPYSL3-202ENST00000398514 KRTAP10-8P60410 259 aa9.39□□□□□ -0.91
DPYSL3-202ENST00000398514 NBPF19A0A087WUL8 3843 aa9.37□□□□□ -0.91
DPYSL3-202ENST00000398514 CSMD1Q96PZ7 3565 aa9.33□□□□□ -0.92
DPYSL3-202ENST00000398514 P0C880 135 aa9.33□□□□□ -0.92
DPYSL3-202ENST00000398514 OTOGQ6ZRI0 2925 aa9.28□□□□□ -0.92
DPYSL3-202ENST00000398514 PP632Q6XCG6 107 aa9.25□□□□□ -0.93
DPYSL3-202ENST00000398514 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
DPYSL3-202ENST00000398514 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
DPYSL3-202ENST00000398514 SMG1Q96Q15 3661 aaKnown RBP9.23□□□□□ -0.93
DPYSL3-202ENST00000398514 SRRM2Q9UQ35 2752 aaKnown RBP9.17□□□□□ -0.94
DPYSL3-202ENST00000398514 SVEP1Q4LDE5 3571 aa9.1□□□□□ -0.95
DPYSL3-202ENST00000398514 CSMD2Q7Z408 3487 aa9.02□□□□□ -0.97
DPYSL3-202ENST00000398514 FBN3Q75N90 2809 aa9.02□□□□□ -0.97
DPYSL3-202ENST00000398514 CUBNO60494 3623 aa9.01□□□□□ -0.97
DPYSL3-202ENST00000398514 ANK3Q12955 4377 aaKnown RBP8.96□□□□□ -0.97
DPYSL3-202ENST00000398514 PRO2289Q9P1D8 64 aa8.96□□□□□ -0.97
DPYSL3-202ENST00000398514 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
DPYSL3-202ENST00000398514 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
DPYSL3-202ENST00000398514 SPENQ96T58 3664 aaKnown RBP8.87□□□□□ -0.99
DPYSL3-202ENST00000398514 TRRAPQ9Y4A5 3859 aa8.85□□□□□ -0.99
DPYSL3-202ENST00000398514 MEGF8Q7Z7M0 2845 aa8.84□□□□□ -0.99
DPYSL3-202ENST00000398514 COL7A1Q02388 2944 aa8.8□□□□□ -1
DPYSL3-202ENST00000398514 KRTAP12-1P59990 96 aa8.77□□□□□ -1.01
DPYSL3-202ENST00000398514 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
DPYSL3-202ENST00000398514 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
DPYSL3-202ENST00000398514 BSNQ9UPA5 3926 aa8.58□□□□□ -1.04
DPYSL3-202ENST00000398514 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
DPYSL3-202ENST00000398514 HUWE1Q7Z6Z7 4374 aaKnown RBP8.43□□□□□ -1.06
DPYSL3-202ENST00000398514 KRTAP10-4P60372 401 aaPredicted RBP8.39□□□□□ -1.07
DPYSL3-202ENST00000398514 VPS13CQ709C8 3753 aa8.38□□□□□ -1.07
DPYSL3-202ENST00000398514 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
DPYSL3-202ENST00000398514 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
DPYSL3-202ENST00000398514 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
DPYSL3-202ENST00000398514 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
DPYSL3-202ENST00000398514 CSMD3Q7Z407 3707 aa8.15□□□□□ -1.1
DPYSL3-202ENST00000398514 ZNF469Q96JG9 3925 aaPredicted RBP8.03□□□□□ -1.12
DPYSL3-202ENST00000398514 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
DPYSL3-202ENST00000398514 KRTAP10-12P60413 245 aa8□□□□□ -1.13
DPYSL3-202ENST00000398514 ALMS1Q8TCU4 4167 aa7.99□□□□□ -1.13
DPYSL3-202ENST00000398514 DNAH5Q8TE73 4624 aa7.98□□□□□ -1.13
DPYSL3-202ENST00000398514 LORP23490 312 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms