RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 A0A087WVE0 104 aa15.44■□□□□ 0.06
CPNE1-203ENST00000397442 NDUFB1O75438 58 aa15.41■□□□□ 0.06
CPNE1-203ENST00000397442 A0A1B0GVX0 72 aa15.41■□□□□ 0.06
CPNE1-203ENST00000397442 J3QL48 77 aa15.39■□□□□ 0.05
CPNE1-203ENST00000397442 IGHV6-1A0A0B4J1U7 121 aa15.37■□□□□ 0.05
CPNE1-203ENST00000397442 PCLOQ9Y6V0 5065 aa15.35■□□□□ 0.05
CPNE1-203ENST00000397442 NOTCH2NLQ7Z3S9 236 aa15.33■□□□□ 0.04
CPNE1-203ENST00000397442 MMP24-AS1A0A0U1RRL7 71 aa15.29■□□□□ 0.04
CPNE1-203ENST00000397442 C8orf17Q9NRJ1 99 aa15.29■□□□□ 0.04
CPNE1-203ENST00000397442 HCG22E2RYF7 251 aa15.27■□□□□ 0.03
CPNE1-203ENST00000397442 FP248Q71RG6 208 aaPredicted RBP15.26■□□□□ 0.03
CPNE1-203ENST00000397442 FAM236AA0A1B0GUQ0 79 aa15.23■□□□□ 0.03
CPNE1-203ENST00000397442 FAM236BA0A1B0GV22 79 aa15.23■□□□□ 0.03
CPNE1-203ENST00000397442 C8orf87E5RJ46 101 aa15.22■□□□□ 0.03
CPNE1-203ENST00000397442 WFDC13Q8IUB5 93 aa15.22■□□□□ 0.03
CPNE1-203ENST00000397442 LINC00313P59037 77 aa15.22■□□□□ 0.03
CPNE1-203ENST00000397442 CASC2Q6XLA1 102 aa15.19■□□□□ 0.02
CPNE1-203ENST00000397442 hDV103S1A0JD37 113 aa15.18■□□□□ 0.02
CPNE1-203ENST00000397442 IGLV7-46A0A075B6I9 117 aa15.16■□□□□ 0.02
CPNE1-203ENST00000397442 KRTAP16-1A8MUX0 517 aa15.14■□□□□ 0.01
CPNE1-203ENST00000397442 PRR4Q16378 134 aa15.13■□□□□ 0.01
CPNE1-203ENST00000397442 SCGB1A1P11684 91 aa15.12■□□□□ 0.01
CPNE1-203ENST00000397442 C9orf92A6NGG3 77 aa15.12■□□□□ 0.01
CPNE1-203ENST00000397442 TMEM254Q8TBM7 123 aa15.12■□□□□ 0.01
CPNE1-203ENST00000397442 MRPL34Q9BQ48 92 aaKnown RBP15.09■□□□□ 0.01
CPNE1-203ENST00000397442 KRTAP13-3Q3SY46 172 aa15.06■□□□□ 0
CPNE1-203ENST00000397442 ATOX1O00244 68 aa15□□□□□ -0.01
CPNE1-203ENST00000397442 Q8N9P0 234 aaPredicted RBP15□□□□□ -0.01
CPNE1-203ENST00000397442 OCR1Q9BZK8 76 aa14.98□□□□□ -0.01
CPNE1-203ENST00000397442 TPRXLQ17RH7 258 aa14.96□□□□□ -0.01
CPNE1-203ENST00000397442 NDUFS5O43920 106 aa14.93□□□□□ -0.02
CPNE1-203ENST00000397442 C20orf166-AS1Q96NR2 134 aa14.92□□□□□ -0.02
CPNE1-203ENST00000397442 HERC1Q15751 4861 aa14.91□□□□□ -0.02
CPNE1-203ENST00000397442 A8MUU9 505 aa14.9□□□□□ -0.02
CPNE1-203ENST00000397442 XP32Q5T750 250 aa14.88□□□□□ -0.03
CPNE1-203ENST00000397442 SMIM20Q8N5G0 67 aa14.88□□□□□ -0.03
CPNE1-203ENST00000397442 TRAV7A0A075B6U4 112 aa14.86□□□□□ -0.03
CPNE1-203ENST00000397442 TP53AIP1Q9HCN2 124 aa14.85□□□□□ -0.03
CPNE1-203ENST00000397442 ANAPC13Q9BS18 74 aa14.84□□□□□ -0.03
CPNE1-203ENST00000397442 LPAP08519 4548 aa14.83□□□□□ -0.04
CPNE1-203ENST00000397442 SERP2Q8N6R1 65 aa14.83□□□□□ -0.04
CPNE1-203ENST00000397442 Q75L30 129 aa14.82□□□□□ -0.04
CPNE1-203ENST00000397442 UQCRQO14949 82 aa14.81□□□□□ -0.04
CPNE1-203ENST00000397442 Q5W150 140 aa14.77□□□□□ -0.04
CPNE1-203ENST00000397442 RPL37P61927 97 aaKnown RBP14.74□□□□□ -0.05
CPNE1-203ENST00000397442 COX7CP15954 63 aa14.71□□□□□ -0.05
CPNE1-203ENST00000397442 TRAV22A0A0B4J277 110 aa14.71□□□□□ -0.06
CPNE1-203ENST00000397442 ZCCHC13Q8WW36 166 aaKnown RBP14.7□□□□□ -0.06
CPNE1-203ENST00000397442 C5orf47Q569G3 176 aa14.69□□□□□ -0.06
CPNE1-203ENST00000397442 LRP2P98164 4655 aa14.69□□□□□ -0.06
CPNE1-203ENST00000397442 HMCN2Q8NDA2 5059 aa14.68□□□□□ -0.06
CPNE1-203ENST00000397442 H0Y9P7 68 aa14.67□□□□□ -0.06
CPNE1-203ENST00000397442 PCP4P48539 62 aa14.61□□□□□ -0.07
CPNE1-203ENST00000397442 MP68P56378 58 aa14.59□□□□□ -0.07
CPNE1-203ENST00000397442 ATP11AUNQ6ZP68 121 aa14.59□□□□□ -0.07
CPNE1-203ENST00000397442 CCDC179H3BU77 68 aa14.57□□□□□ -0.08
CPNE1-203ENST00000397442 C20orf197Q8N268 126 aa14.57□□□□□ -0.08
CPNE1-203ENST00000397442 A0A0U1RQV1 116 aa14.55□□□□□ -0.08
CPNE1-203ENST00000397442 LINC00208Q96KT6 92 aa14.55□□□□□ -0.08
CPNE1-203ENST00000397442 H3BPC8 53 aa14.52□□□□□ -0.08
CPNE1-203ENST00000397442 C1orf64Q8NEQ6 169 aa14.52□□□□□ -0.08
CPNE1-203ENST00000397442 PCOTHQ58A44 107 aa14.51□□□□□ -0.09
CPNE1-203ENST00000397442 SNURFQ9Y675 71 aa14.51□□□□□ -0.09
CPNE1-203ENST00000397442 KLKP1Q107X0 134 aa14.48□□□□□ -0.09
CPNE1-203ENST00000397442 IGKV2-30P06310 120 aa14.46□□□□□ -0.09
CPNE1-203ENST00000397442 LOC101927531A0A1B0GV80 90 aa14.46□□□□□ -0.1
CPNE1-203ENST00000397442 CYSTM1Q9H1C7 97 aa14.44□□□□□ -0.1
CPNE1-203ENST00000397442 IGKV2D-30A0A075B6S6 120 aa14.42□□□□□ -0.1
CPNE1-203ENST00000397442 CYP4F30PQ9H0H9 118 aa14.42□□□□□ -0.1
CPNE1-203ENST00000397442 SEC61BP60468 96 aaKnown RBP14.41□□□□□ -0.1
CPNE1-203ENST00000397442 SPINK7P58062 85 aa14.36□□□□□ -0.11
CPNE1-203ENST00000397442 C7orf65Q6ZTY9 151 aa14.36□□□□□ -0.11
CPNE1-203ENST00000397442 MUC17Q685J3 4493 aa14.31□□□□□ -0.12
CPNE1-203ENST00000397442 H7BZZ5 65 aa14.26□□□□□ -0.13
CPNE1-203ENST00000397442 KRTAP4-1Q9BYQ7 146 aa14.23□□□□□ -0.13
CPNE1-203ENST00000397442 NDUFC1O43677 76 aa14.23□□□□□ -0.13
CPNE1-203ENST00000397442 HRES1P13985 223 aa14.17□□□□□ -0.14
CPNE1-203ENST00000397442 C4orf26Q17RF5 130 aa14.08□□□□□ -0.16
CPNE1-203ENST00000397442 SPANXA2-OT1Q8N9U9 137 aa14.06□□□□□ -0.16
CPNE1-203ENST00000397442 UBR4Q5T4S7 5183 aa14.04□□□□□ -0.16
CPNE1-203ENST00000397442 MPLKIPQ8TAP9 179 aa14.03□□□□□ -0.16
CPNE1-203ENST00000397442 TMEM258P61165 79 aa14□□□□□ -0.17
CPNE1-203ENST00000397442 MUC2Q02817 5179 aa13.95□□□□□ -0.18
CPNE1-203ENST00000397442 COX6B2Q6YFQ2 88 aa13.95□□□□□ -0.18
CPNE1-203ENST00000397442 KRTAP3-1Q9BYR8 98 aa13.95□□□□□ -0.18
CPNE1-203ENST00000397442 FAM236DA0A1B0GTK5 79 aa13.91□□□□□ -0.18
CPNE1-203ENST00000397442 FAM236CP0DP71 79 aa13.91□□□□□ -0.18
CPNE1-203ENST00000397442 DMAC1Q96GE9 116 aa13.9□□□□□ -0.18
CPNE1-203ENST00000397442 RBM12B-AS1Q9P1G2 102 aa13.86□□□□□ -0.19
CPNE1-203ENST00000397442 RNF213Q63HN8 5207 aa13.86□□□□□ -0.19
CPNE1-203ENST00000397442 ATP5EP56381 51 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-203ENST00000397442 KRTAP19-2Q3LHN2 52 aa13.82□□□□□ -0.2
CPNE1-203ENST00000397442 A8MUN3 132 aa13.81□□□□□ -0.2
CPNE1-203ENST00000397442 ACYP2P14621 99 aa13.74□□□□□ -0.21
CPNE1-203ENST00000397442 H1FX-AS1Q4G0G2 97 aa13.68□□□□□ -0.22
CPNE1-203ENST00000397442 COA5Q86WW8 74 aa13.63□□□□□ -0.23
CPNE1-203ENST00000397442 LCE2CQ5TA81 110 aa13.6□□□□□ -0.23
CPNE1-203ENST00000397442 SERP1Q9Y6X1 66 aa13.56□□□□□ -0.24
CPNE1-203ENST00000397442 S4R3F8 94 aa13.51□□□□□ -0.25
CPNE1-203ENST00000397442 LCA10Q71F78 164 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms