RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 IGKV3D-7A0A0C4DH55 119 aa13.17□□□□□ -0.3
TSPAN4-202ENST00000397396 A0A1B0GVX0 72 aa13.17□□□□□ -0.3
TSPAN4-202ENST00000397396 PRR15Q8IV56 129 aa13.16□□□□□ -0.3
TSPAN4-202ENST00000397396 C8orf87E5RJ46 101 aa13.13□□□□□ -0.31
TSPAN4-202ENST00000397396 K7EQZ3 153 aa13.13□□□□□ -0.31
TSPAN4-202ENST00000397396 IGHV6-1A0A0B4J1U7 121 aa13.13□□□□□ -0.31
TSPAN4-202ENST00000397396 Q8N9L7 120 aa13.08□□□□□ -0.32
TSPAN4-202ENST00000397396 LINC00313P59037 77 aa13.07□□□□□ -0.32
TSPAN4-202ENST00000397396 HIST1H4AP62805 103 aaKnown RBP13.06□□□□□ -0.32
TSPAN4-202ENST00000397396 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
TSPAN4-202ENST00000397396 C8orf17Q9NRJ1 99 aa13.05□□□□□ -0.32
TSPAN4-202ENST00000397396 TPRXLQ17RH7 258 aa13.04□□□□□ -0.32
TSPAN4-202ENST00000397396 MT-ATP8P03928 68 aa13.03□□□□□ -0.32
TSPAN4-202ENST00000397396 KRTAP13-3Q3SY46 172 aa13.01□□□□□ -0.33
TSPAN4-202ENST00000397396 MMP24-AS1A0A0U1RRL7 71 aa12.99□□□□□ -0.33
TSPAN4-202ENST00000397396 C9orf92A6NGG3 77 aa12.98□□□□□ -0.33
TSPAN4-202ENST00000397396 HCG22E2RYF7 251 aa12.98□□□□□ -0.33
TSPAN4-202ENST00000397396 hDV103S1A0JD37 113 aa12.95□□□□□ -0.34
TSPAN4-202ENST00000397396 CASC2Q6XLA1 102 aa12.94□□□□□ -0.34
TSPAN4-202ENST00000397396 NOTCH2NLQ7Z3S9 236 aa12.94□□□□□ -0.34
TSPAN4-202ENST00000397396 TMEM254Q8TBM7 123 aa12.94□□□□□ -0.34
TSPAN4-202ENST00000397396 A0A087WVE0 104 aa12.9□□□□□ -0.34
TSPAN4-202ENST00000397396 WFDC13Q8IUB5 93 aa12.9□□□□□ -0.34
TSPAN4-202ENST00000397396 MRPL34Q9BQ48 92 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-202ENST00000397396 KRTAP16-1A8MUX0 517 aa12.88□□□□□ -0.35
TSPAN4-202ENST00000397396 HMCN2Q8NDA2 5059 aa12.87□□□□□ -0.35
TSPAN4-202ENST00000397396 XP32Q5T750 250 aa12.85□□□□□ -0.35
TSPAN4-202ENST00000397396 C20orf166-AS1Q96NR2 134 aa12.83□□□□□ -0.36
TSPAN4-202ENST00000397396 Q8N9P0 234 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-202ENST00000397396 Q75L30 129 aa12.81□□□□□ -0.36
TSPAN4-202ENST00000397396 A8MUU9 505 aa12.8□□□□□ -0.36
TSPAN4-202ENST00000397396 NDUFS5O43920 106 aa12.77□□□□□ -0.37
TSPAN4-202ENST00000397396 FAM236AA0A1B0GUQ0 79 aa12.75□□□□□ -0.37
TSPAN4-202ENST00000397396 FAM236BA0A1B0GV22 79 aa12.75□□□□□ -0.37
TSPAN4-202ENST00000397396 SCGB1A1P11684 91 aa12.75□□□□□ -0.37
TSPAN4-202ENST00000397396 RPL37P61927 97 aaKnown RBP12.75□□□□□ -0.37
TSPAN4-202ENST00000397396 TP53AIP1Q9HCN2 124 aa12.73□□□□□ -0.37
TSPAN4-202ENST00000397396 ATP11AUNQ6ZP68 121 aa12.67□□□□□ -0.38
TSPAN4-202ENST00000397396 SMIM20Q8N5G0 67 aa12.66□□□□□ -0.38
TSPAN4-202ENST00000397396 ATOX1O00244 68 aa12.64□□□□□ -0.39
TSPAN4-202ENST00000397396 LPAP08519 4548 aa12.63□□□□□ -0.39
TSPAN4-202ENST00000397396 SEC61BP60468 96 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-202ENST00000397396 UQCRQO14949 82 aa12.62□□□□□ -0.39
TSPAN4-202ENST00000397396 ZCCHC13Q8WW36 166 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-202ENST00000397396 OCR1Q9BZK8 76 aa12.59□□□□□ -0.39
TSPAN4-202ENST00000397396 LRP2P98164 4655 aa12.55□□□□□ -0.4
TSPAN4-202ENST00000397396 TRAV22A0A0B4J277 110 aa12.53□□□□□ -0.4
TSPAN4-202ENST00000397396 TRAV7A0A075B6U4 112 aa12.52□□□□□ -0.41
TSPAN4-202ENST00000397396 PCOTHQ58A44 107 aa12.52□□□□□ -0.41
TSPAN4-202ENST00000397396 UBR4Q5T4S7 5183 aa12.48□□□□□ -0.41
TSPAN4-202ENST00000397396 C5orf47Q569G3 176 aa12.47□□□□□ -0.41
TSPAN4-202ENST00000397396 Q5W150 140 aa12.47□□□□□ -0.41
TSPAN4-202ENST00000397396 MP68P56378 58 aa12.45□□□□□ -0.42
TSPAN4-202ENST00000397396 H0Y9P7 68 aa12.44□□□□□ -0.42
TSPAN4-202ENST00000397396 SERP2Q8N6R1 65 aa12.44□□□□□ -0.42
TSPAN4-202ENST00000397396 H3BPC8 53 aa12.4□□□□□ -0.42
TSPAN4-202ENST00000397396 MUC17Q685J3 4493 aa12.4□□□□□ -0.42
TSPAN4-202ENST00000397396 LOC101927531A0A1B0GV80 90 aa12.37□□□□□ -0.43
TSPAN4-202ENST00000397396 ANAPC13Q9BS18 74 aa12.37□□□□□ -0.43
TSPAN4-202ENST00000397396 C7orf65Q6ZTY9 151 aa12.37□□□□□ -0.43
TSPAN4-202ENST00000397396 IGKV2-30P06310 120 aa12.34□□□□□ -0.43
TSPAN4-202ENST00000397396 IGKV2D-30A0A075B6S6 120 aa12.32□□□□□ -0.44
TSPAN4-202ENST00000397396 C1orf64Q8NEQ6 169 aa12.32□□□□□ -0.44
TSPAN4-202ENST00000397396 LINC00208Q96KT6 92 aa12.32□□□□□ -0.44
TSPAN4-202ENST00000397396 COX7CP15954 63 aa12.31□□□□□ -0.44
TSPAN4-202ENST00000397396 SPINK7P58062 85 aa12.31□□□□□ -0.44
TSPAN4-202ENST00000397396 CYP4F30PQ9H0H9 118 aa12.23□□□□□ -0.45
TSPAN4-202ENST00000397396 A0A0U1RQV1 116 aa12.21□□□□□ -0.45
TSPAN4-202ENST00000397396 C20orf197Q8N268 126 aa12.21□□□□□ -0.45
TSPAN4-202ENST00000397396 RNF213Q63HN8 5207 aa12.18□□□□□ -0.46
TSPAN4-202ENST00000397396 KRTAP4-1Q9BYQ7 146 aa12.16□□□□□ -0.46
TSPAN4-202ENST00000397396 KLKP1Q107X0 134 aa12.15□□□□□ -0.46
TSPAN4-202ENST00000397396 SNURFQ9Y675 71 aa12.12□□□□□ -0.47
TSPAN4-202ENST00000397396 HRES1P13985 223 aa12.11□□□□□ -0.47
TSPAN4-202ENST00000397396 RBM12B-AS1Q9P1G2 102 aa12.1□□□□□ -0.47
TSPAN4-202ENST00000397396 NDUFC1O43677 76 aa12.06□□□□□ -0.48
TSPAN4-202ENST00000397396 MPLKIPQ8TAP9 179 aa12.03□□□□□ -0.48
TSPAN4-202ENST00000397396 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
TSPAN4-202ENST00000397396 C4orf26Q17RF5 130 aa11.98□□□□□ -0.49
TSPAN4-202ENST00000397396 MUC2Q02817 5179 aa11.97□□□□□ -0.49
TSPAN4-202ENST00000397396 FAM236DA0A1B0GTK5 79 aa11.96□□□□□ -0.49
TSPAN4-202ENST00000397396 FAM236CP0DP71 79 aa11.96□□□□□ -0.49
TSPAN4-202ENST00000397396 COX6B2Q6YFQ2 88 aa11.96□□□□□ -0.49
TSPAN4-202ENST00000397396 PCP4P48539 62 aa11.91□□□□□ -0.5
TSPAN4-202ENST00000397396 SPANXA2-OT1Q8N9U9 137 aa11.91□□□□□ -0.5
TSPAN4-202ENST00000397396 A8MUN3 132 aa11.89□□□□□ -0.51
TSPAN4-202ENST00000397396 H7BZZ5 65 aa11.88□□□□□ -0.51
TSPAN4-202ENST00000397396 CYSTM1Q9H1C7 97 aa11.85□□□□□ -0.51
TSPAN4-202ENST00000397396 DMAC1Q96GE9 116 aa11.81□□□□□ -0.52
TSPAN4-202ENST00000397396 KRTAP19-2Q3LHN2 52 aa11.8□□□□□ -0.52
TSPAN4-202ENST00000397396 H1FX-AS1Q4G0G2 97 aa11.8□□□□□ -0.52
TSPAN4-202ENST00000397396 KRTAP3-1Q9BYR8 98 aa11.77□□□□□ -0.53
TSPAN4-202ENST00000397396 ATP5EP56381 51 aaPredicted RBP11.73□□□□□ -0.53
TSPAN4-202ENST00000397396 ACYP2P14621 99 aa11.72□□□□□ -0.53
TSPAN4-202ENST00000397396 TMEM258P61165 79 aa11.72□□□□□ -0.53
TSPAN4-202ENST00000397396 LCE2CQ5TA81 110 aa11.69□□□□□ -0.54
TSPAN4-202ENST00000397396 S4R3F8 94 aa11.62□□□□□ -0.55
TSPAN4-202ENST00000397396 FAT4Q6V0I7 4981 aa11.62□□□□□ -0.55
TSPAN4-202ENST00000397396 CHKB-CPT1BH3BT56 60 aa11.53□□□□□ -0.56
TSPAN4-202ENST00000397396 MT1HP80294 61 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms