RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KRTAP13-3Q3SY46 172 aa8.18□□□□□ -1.1
SEC13-208ENST00000397109 CD164Q04900 197 aa8.17□□□□□ -1.1
SEC13-208ENST00000397109 A0A087WVE0 104 aa8.16□□□□□ -1.1
SEC13-208ENST00000397109 SMIM20Q8N5G0 67 aa8.16□□□□□ -1.1
SEC13-208ENST00000397109 A0A087WSZ3 146 aa8.15□□□□□ -1.1
SEC13-208ENST00000397109 HRCT1Q6UXD1 115 aa8.15□□□□□ -1.1
SEC13-208ENST00000397109 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
SEC13-208ENST00000397109 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
SEC13-208ENST00000397109 J3KT08 172 aa8.12□□□□□ -1.11
SEC13-208ENST00000397109 UQCRQO14949 82 aa8.12□□□□□ -1.11
SEC13-208ENST00000397109 IGKV4-1P06312 121 aa8.12□□□□□ -1.11
SEC13-208ENST00000397109 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
SEC13-208ENST00000397109 A0A0G2JQZ4 141 aa8.11□□□□□ -1.11
SEC13-208ENST00000397109 SERP2Q8N6R1 65 aa8.11□□□□□ -1.11
SEC13-208ENST00000397109 MUC2Q02817 5179 aa8.11□□□□□ -1.11
SEC13-208ENST00000397109 COX7CP15954 63 aa8.1□□□□□ -1.11
SEC13-208ENST00000397109 Q5XG85 94 aa8.1□□□□□ -1.11
SEC13-208ENST00000397109 DSCR10P59022 87 aa8.09□□□□□ -1.11
SEC13-208ENST00000397109 LINC00472Q9H8W2 130 aa8.09□□□□□ -1.11
SEC13-208ENST00000397109 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
SEC13-208ENST00000397109 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
SEC13-208ENST00000397109 TRAV7A0A075B6U4 112 aa8.05□□□□□ -1.12
SEC13-208ENST00000397109 A8MWP4 228 aa8.03□□□□□ -1.12
SEC13-208ENST00000397109 XP32Q5T750 250 aa8.03□□□□□ -1.12
SEC13-208ENST00000397109 Q8N9L7 120 aa8.03□□□□□ -1.12
SEC13-208ENST00000397109 K7EQZ3 153 aa8.02□□□□□ -1.13
SEC13-208ENST00000397109 NDUFB1O75438 58 aa8.02□□□□□ -1.13
SEC13-208ENST00000397109 CCDC179H3BU77 68 aa8.01□□□□□ -1.13
SEC13-208ENST00000397109 C1orf195Q5TG92 126 aa8.01□□□□□ -1.13
SEC13-208ENST00000397109 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
SEC13-208ENST00000397109 HCG22E2RYF7 251 aa8□□□□□ -1.13
SEC13-208ENST00000397109 Q96NJ1 140 aa7.99□□□□□ -1.13
SEC13-208ENST00000397109 DEFB116Q30KQ4 102 aa7.97□□□□□ -1.13
SEC13-208ENST00000397109 C9orf92A6NGG3 77 aa7.96□□□□□ -1.13
SEC13-208ENST00000397109 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
SEC13-208ENST00000397109 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
SEC13-208ENST00000397109 KLKP1Q107X0 134 aa7.91□□□□□ -1.14
SEC13-208ENST00000397109 CASC2Q6XLA1 102 aa7.9□□□□□ -1.14
SEC13-208ENST00000397109 KRTAP4-1Q9BYQ7 146 aa7.9□□□□□ -1.14
SEC13-208ENST00000397109 A0A1B0GVX0 72 aa7.89□□□□□ -1.15
SEC13-208ENST00000397109 C5orf47Q569G3 176 aa7.89□□□□□ -1.15
SEC13-208ENST00000397109 LCE2AQ5TA79 106 aaPredicted RBP7.88□□□□□ -1.15
SEC13-208ENST00000397109 NDUFC1O43677 76 aa7.87□□□□□ -1.15
SEC13-208ENST00000397109 MMP24-AS1A0A0U1RRL7 71 aa7.87□□□□□ -1.15
SEC13-208ENST00000397109 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
SEC13-208ENST00000397109 C20orf197Q8N268 126 aa7.87□□□□□ -1.15
SEC13-208ENST00000397109 hDV103S1A0JD37 113 aa7.86□□□□□ -1.15
SEC13-208ENST00000397109 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
SEC13-208ENST00000397109 C8orf87E5RJ46 101 aa7.85□□□□□ -1.15
SEC13-208ENST00000397109 WFDC13Q8IUB5 93 aa7.85□□□□□ -1.15
SEC13-208ENST00000397109 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
SEC13-208ENST00000397109 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
SEC13-208ENST00000397109 TMEM258P61165 79 aa7.83□□□□□ -1.16
SEC13-208ENST00000397109 RPL37P61927 97 aaKnown RBP7.83□□□□□ -1.16
SEC13-208ENST00000397109 H3BPC8 53 aa7.82□□□□□ -1.16
SEC13-208ENST00000397109 IGHV6-1A0A0B4J1U7 121 aa7.81□□□□□ -1.16
SEC13-208ENST00000397109 MP68P56378 58 aa7.79□□□□□ -1.16
SEC13-208ENST00000397109 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
SEC13-208ENST00000397109 H7BZZ5 65 aa7.76□□□□□ -1.17
SEC13-208ENST00000397109 LINC00313P59037 77 aa7.75□□□□□ -1.17
SEC13-208ENST00000397109 CYSTM1Q9H1C7 97 aa7.75□□□□□ -1.17
SEC13-208ENST00000397109 Q75L30 129 aa7.75□□□□□ -1.17
SEC13-208ENST00000397109 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
SEC13-208ENST00000397109 ATP5EP56381 51 aaPredicted RBP7.74□□□□□ -1.17
SEC13-208ENST00000397109 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
SEC13-208ENST00000397109 TRAV22A0A0B4J277 110 aa7.72□□□□□ -1.17
SEC13-208ENST00000397109 ATP11AUNQ6ZP68 121 aa7.71□□□□□ -1.18
SEC13-208ENST00000397109 H0Y9P7 68 aa7.7□□□□□ -1.18
SEC13-208ENST00000397109 RPS28P62857 69 aaKnown RBP7.69□□□□□ -1.18
SEC13-208ENST00000397109 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
SEC13-208ENST00000397109 NOTCH2NLQ7Z3S9 236 aa7.69□□□□□ -1.18
SEC13-208ENST00000397109 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
SEC13-208ENST00000397109 Q8N9P0 234 aaPredicted RBP7.68□□□□□ -1.18
SEC13-208ENST00000397109 NDUFS5O43920 106 aa7.68□□□□□ -1.18
SEC13-208ENST00000397109 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
SEC13-208ENST00000397109 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
SEC13-208ENST00000397109 C20orf166-AS1Q96NR2 134 aa7.67□□□□□ -1.18
SEC13-208ENST00000397109 LINC00208Q96KT6 92 aa7.66□□□□□ -1.18
SEC13-208ENST00000397109 A8MUU9 505 aa7.65□□□□□ -1.18
SEC13-208ENST00000397109 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
SEC13-208ENST00000397109 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
SEC13-208ENST00000397109 KRTAP9-2Q9BYQ4 174 aa7.62□□□□□ -1.19
SEC13-208ENST00000397109 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
SEC13-208ENST00000397109 SPANXA2-OT1Q8N9U9 137 aa7.61□□□□□ -1.19
SEC13-208ENST00000397109 LOC101927531A0A1B0GV80 90 aa7.6□□□□□ -1.19
SEC13-208ENST00000397109 MT1HP80294 61 aa7.6□□□□□ -1.19
SEC13-208ENST00000397109 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
SEC13-208ENST00000397109 CYP4F30PQ9H0H9 118 aa7.56□□□□□ -1.2
SEC13-208ENST00000397109 Q5W150 140 aa7.53□□□□□ -1.2
SEC13-208ENST00000397109 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
SEC13-208ENST00000397109 M0R2T5 61 aa7.51□□□□□ -1.21
SEC13-208ENST00000397109 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
SEC13-208ENST00000397109 IGKV2-30P06310 120 aa7.46□□□□□ -1.22
SEC13-208ENST00000397109 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.22
SEC13-208ENST00000397109 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
SEC13-208ENST00000397109 SMIM26A0A096LP01 95 aa7.42□□□□□ -1.22
SEC13-208ENST00000397109 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
SEC13-208ENST00000397109 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
SEC13-208ENST00000397109 KRTAP9-6A0A140TA67 174 aa7.36□□□□□ -1.23
SEC13-208ENST00000397109 HRES1P13985 223 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 340.1 ms