RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 IGHV6-1A0A0B4J1U7 121 aa11.64□□□□□ -0.55
FXN-202ENST00000396364 A8MWP4 228 aa11.64□□□□□ -0.55
FXN-202ENST00000396364 C8orf87E5RJ46 101 aa11.64□□□□□ -0.55
FXN-202ENST00000396364 LINC00846Q9NV44 126 aa11.64□□□□□ -0.55
FXN-202ENST00000396364 SEC61BP60468 96 aaKnown RBP11.62□□□□□ -0.55
FXN-202ENST00000396364 FAM240AA0A1B0GVK7 77 aa11.6□□□□□ -0.55
FXN-202ENST00000396364 DSCR10P59022 87 aa11.59□□□□□ -0.55
FXN-202ENST00000396364 J3QR89 54 aa11.58□□□□□ -0.56
FXN-202ENST00000396364 PRR15Q8IV56 129 aa11.55□□□□□ -0.56
FXN-202ENST00000396364 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
FXN-202ENST00000396364 RPL37P61927 97 aaKnown RBP11.54□□□□□ -0.56
FXN-202ENST00000396364 Q75L30 129 aa11.52□□□□□ -0.57
FXN-202ENST00000396364 C8orf17Q9NRJ1 99 aa11.5□□□□□ -0.57
FXN-202ENST00000396364 C20orf166-AS1Q96NR2 134 aa11.49□□□□□ -0.57
FXN-202ENST00000396364 UBR4Q5T4S7 5183 aa11.48□□□□□ -0.57
FXN-202ENST00000396364 K7EQZ3 153 aa11.48□□□□□ -0.57
FXN-202ENST00000396364 CXCL6P80162 114 aa11.48□□□□□ -0.57
FXN-202ENST00000396364 ATP11AUNQ6ZP68 121 aa11.48□□□□□ -0.57
FXN-202ENST00000396364 NOTCH2NLQ7Z3S9 236 aa11.47□□□□□ -0.57
FXN-202ENST00000396364 A8MUU9 505 aa11.46□□□□□ -0.57
FXN-202ENST00000396364 KRTAP16-1A8MUX0 517 aa11.45□□□□□ -0.58
FXN-202ENST00000396364 ATP5EP2Q5VTU8 51 aa11.44□□□□□ -0.58
FXN-202ENST00000396364 PCOTHQ58A44 107 aa11.43□□□□□ -0.58
FXN-202ENST00000396364 Q8N9L7 120 aa11.4□□□□□ -0.58
FXN-202ENST00000396364 TMEM254Q8TBM7 123 aa11.4□□□□□ -0.58
FXN-202ENST00000396364 MMP24-AS1A0A0U1RRL7 71 aa11.39□□□□□ -0.59
FXN-202ENST00000396364 hDV103S1A0JD37 113 aa11.39□□□□□ -0.59
FXN-202ENST00000396364 MUC17Q685J3 4493 aa11.37□□□□□ -0.59
FXN-202ENST00000396364 LINC00643Q86TS7 51 aa11.37□□□□□ -0.59
FXN-202ENST00000396364 MRPL34Q9BQ48 92 aaKnown RBP11.37□□□□□ -0.59
FXN-202ENST00000396364 K7ERU9 68 aa11.35□□□□□ -0.59
FXN-202ENST00000396364 CASC2Q6XLA1 102 aa11.34□□□□□ -0.59
FXN-202ENST00000396364 Q8N9P0 234 aaPredicted RBP11.34□□□□□ -0.59
FXN-202ENST00000396364 HCG22E2RYF7 251 aa11.32□□□□□ -0.6
FXN-202ENST00000396364 WFDC13Q8IUB5 93 aa11.31□□□□□ -0.6
FXN-202ENST00000396364 NDUFS5O43920 106 aa11.29□□□□□ -0.6
FXN-202ENST00000396364 A0A0U1RQV1 116 aa11.28□□□□□ -0.6
FXN-202ENST00000396364 HIST1H4AP62805 103 aaKnown RBP11.26□□□□□ -0.61
FXN-202ENST00000396364 ZCCHC13Q8WW36 166 aaKnown RBP11.24□□□□□ -0.61
FXN-202ENST00000396364 RNF213Q63HN8 5207 aa11.24□□□□□ -0.61
FXN-202ENST00000396364 KRTAP4-1Q9BYQ7 146 aa11.17□□□□□ -0.62
FXN-202ENST00000396364 MUC2Q02817 5179 aa11.14□□□□□ -0.63
FXN-202ENST00000396364 TP53AIP1Q9HCN2 124 aa11.13□□□□□ -0.63
FXN-202ENST00000396364 A0A087WVE0 104 aa11.05□□□□□ -0.64
FXN-202ENST00000396364 IMUPQ9GZP8 106 aa11.04□□□□□ -0.64
FXN-202ENST00000396364 SPINK7P58062 85 aa11.02□□□□□ -0.65
FXN-202ENST00000396364 Q5W150 140 aa10.98□□□□□ -0.65
FXN-202ENST00000396364 COX6B2Q6YFQ2 88 aa10.98□□□□□ -0.65
FXN-202ENST00000396364 RBM12B-AS1Q9P1G2 102 aa10.97□□□□□ -0.65
FXN-202ENST00000396364 MT-ATP8P03928 68 aa10.96□□□□□ -0.65
FXN-202ENST00000396364 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
FXN-202ENST00000396364 UQCRQO14949 82 aa10.94□□□□□ -0.66
FXN-202ENST00000396364 IGKV2D-30A0A075B6S6 120 aa10.93□□□□□ -0.66
FXN-202ENST00000396364 IGKV2-30P06310 120 aa10.93□□□□□ -0.66
FXN-202ENST00000396364 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
FXN-202ENST00000396364 TRAV22A0A0B4J277 110 aa10.92□□□□□ -0.66
FXN-202ENST00000396364 FAM236DA0A1B0GTK5 79 aa10.89□□□□□ -0.67
FXN-202ENST00000396364 FAM236CP0DP71 79 aa10.89□□□□□ -0.67
FXN-202ENST00000396364 HRES1P13985 223 aa10.89□□□□□ -0.67
FXN-202ENST00000396364 ATOX1O00244 68 aa10.87□□□□□ -0.67
FXN-202ENST00000396364 KRTAP19-2Q3LHN2 52 aa10.83□□□□□ -0.68
FXN-202ENST00000396364 MPLKIPQ8TAP9 179 aa10.82□□□□□ -0.68
FXN-202ENST00000396364 OCR1Q9BZK8 76 aa10.82□□□□□ -0.68
FXN-202ENST00000396364 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
FXN-202ENST00000396364 H0Y9P7 68 aa10.81□□□□□ -0.68
FXN-202ENST00000396364 FAT4Q6V0I7 4981 aa10.81□□□□□ -0.68
FXN-202ENST00000396364 MP68P56378 58 aa10.8□□□□□ -0.68
FXN-202ENST00000396364 FAM236AA0A1B0GUQ0 79 aa10.79□□□□□ -0.68
FXN-202ENST00000396364 FAM236BA0A1B0GV22 79 aa10.79□□□□□ -0.68
FXN-202ENST00000396364 LCE2CQ5TA81 110 aa10.79□□□□□ -0.68
FXN-202ENST00000396364 SMIM20Q8N5G0 67 aa10.79□□□□□ -0.68
FXN-202ENST00000396364 C5orf47Q569G3 176 aa10.78□□□□□ -0.68
FXN-202ENST00000396364 CYP4F30PQ9H0H9 118 aa10.72□□□□□ -0.69
FXN-202ENST00000396364 C1orf64Q8NEQ6 169 aa10.71□□□□□ -0.69
FXN-202ENST00000396364 H3BPC8 53 aa10.7□□□□□ -0.7
FXN-202ENST00000396364 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
FXN-202ENST00000396364 LINC00208Q96KT6 92 aa10.69□□□□□ -0.7
FXN-202ENST00000396364 MT1HP80294 61 aa10.68□□□□□ -0.7
FXN-202ENST00000396364 TRAV7A0A075B6U4 112 aa10.67□□□□□ -0.7
FXN-202ENST00000396364 M0R2T5 61 aa10.67□□□□□ -0.7
FXN-202ENST00000396364 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
FXN-202ENST00000396364 H1FX-AS1Q4G0G2 97 aa10.6□□□□□ -0.71
FXN-202ENST00000396364 FLGP20930 4061 aaPredicted RBP10.55□□□□□ -0.72
FXN-202ENST00000396364 SERP2Q8N6R1 65 aa10.52□□□□□ -0.73
FXN-202ENST00000396364 KLKP1Q107X0 134 aa10.47□□□□□ -0.73
FXN-202ENST00000396364 A8MUN3 132 aa10.43□□□□□ -0.74
FXN-202ENST00000396364 KRTAP3-1Q9BYR8 98 aa10.41□□□□□ -0.74
FXN-202ENST00000396364 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
FXN-202ENST00000396364 S4R3F8 94 aa10.39□□□□□ -0.75
FXN-202ENST00000396364 C20orf197Q8N268 126 aa10.37□□□□□ -0.75
FXN-202ENST00000396364 COX7CP15954 63 aa10.35□□□□□ -0.75
FXN-202ENST00000396364 LORP23490 312 aaPredicted RBP10.35□□□□□ -0.75
FXN-202ENST00000396364 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
FXN-202ENST00000396364 ANAPC13Q9BS18 74 aa10.31□□□□□ -0.76
FXN-202ENST00000396364 CSAG1Q6PB30 78 aa10.26□□□□□ -0.77
FXN-202ENST00000396364 LCA10Q71F78 164 aa10.26□□□□□ -0.77
FXN-202ENST00000396364 DMAC1Q96GE9 116 aa10.25□□□□□ -0.77
FXN-202ENST00000396364 NDUFC1O43677 76 aa10.21□□□□□ -0.77
FXN-202ENST00000396364 SPANXA2-OT1Q8N9U9 137 aa10.19□□□□□ -0.78
FXN-202ENST00000396364 ACYP2P14621 99 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms