RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 LINC00208Q96KT6 92 aa9.21□□□□□ -0.94
RAPGEF3-203ENST00000395360 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
RAPGEF3-203ENST00000395360 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
RAPGEF3-203ENST00000395360 H0Y9P7 68 aa9.19□□□□□ -0.94
RAPGEF3-203ENST00000395360 Q1T7F1 81 aa9.18□□□□□ -0.94
RAPGEF3-203ENST00000395360 Q6ZSA8 131 aa9.17□□□□□ -0.94
RAPGEF3-203ENST00000395360 TRAV22A0A0B4J277 110 aa9.16□□□□□ -0.94
RAPGEF3-203ENST00000395360 IGHV6-1A0A0B4J1U7 121 aa9.16□□□□□ -0.94
RAPGEF3-203ENST00000395360 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
RAPGEF3-203ENST00000395360 DYNC1H1Q14204 4646 aaKnown RBP9.15□□□□□ -0.94
RAPGEF3-203ENST00000395360 LRP1BQ9NZR2 4599 aa9.15□□□□□ -0.94
RAPGEF3-203ENST00000395360 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
RAPGEF3-203ENST00000395360 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
RAPGEF3-203ENST00000395360 PRR4Q16378 134 aa9.14□□□□□ -0.95
RAPGEF3-203ENST00000395360 ASB16-AS1Q495Z4 193 aa9.14□□□□□ -0.95
RAPGEF3-203ENST00000395360 EPPK1P58107 5090 aaKnown RBP9.13□□□□□ -0.95
RAPGEF3-203ENST00000395360 H3BPC8 53 aa9.13□□□□□ -0.95
RAPGEF3-203ENST00000395360 C1orf64Q8NEQ6 169 aa9.11□□□□□ -0.95
RAPGEF3-203ENST00000395360 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
RAPGEF3-203ENST00000395360 VPS13BQ7Z7G8 4022 aa9.1□□□□□ -0.95
RAPGEF3-203ENST00000395360 A0A087X002 238 aa9.08□□□□□ -0.96
RAPGEF3-203ENST00000395360 SSBP3-AS1Q7Z2R9 100 aa9.08□□□□□ -0.96
RAPGEF3-203ENST00000395360 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
RAPGEF3-203ENST00000395360 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
RAPGEF3-203ENST00000395360 NDUFS5O43920 106 aa9.08□□□□□ -0.96
RAPGEF3-203ENST00000395360 TP53AIP1Q9HCN2 124 aa9.08□□□□□ -0.96
RAPGEF3-203ENST00000395360 PSPHP1O15172 72 aa9.07□□□□□ -0.96
RAPGEF3-203ENST00000395360 MRPL34Q9BQ48 92 aaKnown RBP9.05□□□□□ -0.96
RAPGEF3-203ENST00000395360 SPANXA2-OT1Q8N9U9 137 aa9.03□□□□□ -0.96
RAPGEF3-203ENST00000395360 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.96
RAPGEF3-203ENST00000395360 KRTAP13-2Q52LG2 175 aa9.02□□□□□ -0.97
RAPGEF3-203ENST00000395360 KTN1-AS1Q86SY8 53 aa9.01□□□□□ -0.97
RAPGEF3-203ENST00000395360 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
RAPGEF3-203ENST00000395360 RYR1P21817 5038 aa8.98□□□□□ -0.97
RAPGEF3-203ENST00000395360 RBM12B-AS1Q9P1G2 102 aa8.98□□□□□ -0.97
RAPGEF3-203ENST00000395360 PCOTHQ58A44 107 aa8.97□□□□□ -0.97
RAPGEF3-203ENST00000395360 A8MUN3 132 aa8.97□□□□□ -0.97
RAPGEF3-203ENST00000395360 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
RAPGEF3-203ENST00000395360 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
RAPGEF3-203ENST00000395360 KIAA1109Q2LD37 5005 aa8.93□□□□□ -0.98
RAPGEF3-203ENST00000395360 Q5VV11 94 aa8.93□□□□□ -0.98
RAPGEF3-203ENST00000395360 A8MU10 97 aa8.91□□□□□ -0.98
RAPGEF3-203ENST00000395360 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
RAPGEF3-203ENST00000395360 C8orf87E5RJ46 101 aa8.9□□□□□ -0.98
RAPGEF3-203ENST00000395360 Q5W150 140 aa8.9□□□□□ -0.98
RAPGEF3-203ENST00000395360 HSPG2P98160 4391 aa8.9□□□□□ -0.98
RAPGEF3-203ENST00000395360 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
RAPGEF3-203ENST00000395360 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
RAPGEF3-203ENST00000395360 LINC00313P59037 77 aa8.88□□□□□ -0.99
RAPGEF3-203ENST00000395360 CHKB-CPT1BH3BT56 60 aa8.87□□□□□ -0.99
RAPGEF3-203ENST00000395360 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
RAPGEF3-203ENST00000395360 Q8N1X5 172 aa8.86□□□□□ -0.99
RAPGEF3-203ENST00000395360 LIMD2Q9BT23 127 aa8.86□□□□□ -0.99
RAPGEF3-203ENST00000395360 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
RAPGEF3-203ENST00000395360 LOC101927531A0A1B0GV80 90 aa8.85□□□□□ -0.99
RAPGEF3-203ENST00000395360 COA5Q86WW8 74 aa8.85□□□□□ -0.99
RAPGEF3-203ENST00000395360 SPTSSBQ8NFR3 76 aa8.85□□□□□ -0.99
RAPGEF3-203ENST00000395360 TYMSOSQ8TAI1 123 aa8.84□□□□□ -0.99
RAPGEF3-203ENST00000395360 Q5VSD8 79 aa8.83□□□□□ -1
RAPGEF3-203ENST00000395360 C4orf48Q5BLP8 95 aa8.82□□□□□ -1
RAPGEF3-203ENST00000395360 FAT1Q14517 4588 aa8.82□□□□□ -1
RAPGEF3-203ENST00000395360 KRTAP10-4P60372 401 aaPredicted RBP8.82□□□□□ -1
RAPGEF3-203ENST00000395360 Q8N9P0 234 aaPredicted RBP8.82□□□□□ -1
RAPGEF3-203ENST00000395360 PRR15LQ9BU68 103 aa8.81□□□□□ -1
RAPGEF3-203ENST00000395360 A6NN06 94 aa8.8□□□□□ -1
RAPGEF3-203ENST00000395360 RETNLBQ9BQ08 111 aa8.78□□□□□ -1
RAPGEF3-203ENST00000395360 HERC2O95714 4834 aa8.78□□□□□ -1
RAPGEF3-203ENST00000395360 SPINK1P00995 79 aa8.77□□□□□ -1
RAPGEF3-203ENST00000395360 Q75L30 129 aa8.77□□□□□ -1.01
RAPGEF3-203ENST00000395360 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
RAPGEF3-203ENST00000395360 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
RAPGEF3-203ENST00000395360 KRTAP16-1A8MUX0 517 aa8.76□□□□□ -1.01
RAPGEF3-203ENST00000395360 LCA10Q71F78 164 aa8.76□□□□□ -1.01
RAPGEF3-203ENST00000395360 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
RAPGEF3-203ENST00000395360 A6NED7 52 aa8.75□□□□□ -1.01
RAPGEF3-203ENST00000395360 HRES1P13985 223 aa8.74□□□□□ -1.01
RAPGEF3-203ENST00000395360 LINC00304Q8N9R0 145 aa8.71□□□□□ -1.01
RAPGEF3-203ENST00000395360 CDC42SE1Q9NRR8 79 aa8.71□□□□□ -1.01
RAPGEF3-203ENST00000395360 IGKV2-30P06310 120 aa8.67□□□□□ -1.02
RAPGEF3-203ENST00000395360 PKHD1L1Q86WI1 4243 aa8.67□□□□□ -1.02
RAPGEF3-203ENST00000395360 SPAG11AQ6PDA7 123 aa8.66□□□□□ -1.02
RAPGEF3-203ENST00000395360 RPS29P62273 56 aaKnown RBP8.65□□□□□ -1.03
RAPGEF3-203ENST00000395360 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.03
RAPGEF3-203ENST00000395360 ACYP2P14621 99 aa8.63□□□□□ -1.03
RAPGEF3-203ENST00000395360 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
RAPGEF3-203ENST00000395360 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
RAPGEF3-203ENST00000395360 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
RAPGEF3-203ENST00000395360 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
RAPGEF3-203ENST00000395360 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
RAPGEF3-203ENST00000395360 H3BS24 57 aa8.53□□□□□ -1.04
RAPGEF3-203ENST00000395360 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
RAPGEF3-203ENST00000395360 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
RAPGEF3-203ENST00000395360 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
RAPGEF3-203ENST00000395360 LRP1Q07954 4544 aaKnown RBP8.48□□□□□ -1.05
RAPGEF3-203ENST00000395360 SPINK7P58062 85 aa8.47□□□□□ -1.05
RAPGEF3-203ENST00000395360 PCLOQ9Y6V0 5065 aa8.47□□□□□ -1.05
RAPGEF3-203ENST00000395360 KRTAP10-8P60410 259 aa8.46□□□□□ -1.05
RAPGEF3-203ENST00000395360 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
RAPGEF3-203ENST00000395360 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
RAPGEF3-203ENST00000395360 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms