RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CEND1Q8N111 149 aa10.08□□□□□ -0.8
TRAF4-203ENST00000394925 H3BQ85 93 aa10.07□□□□□ -0.8
TRAF4-203ENST00000394925 TMEM256-PLSCR3K7ERE1 68 aa10.06□□□□□ -0.8
TRAF4-203ENST00000394925 TMEM238LA0A1B0GVL6 79 aa10.05□□□□□ -0.8
TRAF4-203ENST00000394925 A6NJY4 79 aa10.05□□□□□ -0.8
TRAF4-203ENST00000394925 WFDC13Q8IUB5 93 aa10.05□□□□□ -0.8
TRAF4-203ENST00000394925 PAM16Q9Y3D7 125 aa10.05□□□□□ -0.8
TRAF4-203ENST00000394925 VPS25Q9BRG1 176 aa10.04□□□□□ -0.8
TRAF4-203ENST00000394925 FXYD2P54710 66 aa10.03□□□□□ -0.8
TRAF4-203ENST00000394925 SPATA45Q537H7 98 aa10.03□□□□□ -0.8
TRAF4-203ENST00000394925 PSMB2P49721 201 aa9.99□□□□□ -0.81
TRAF4-203ENST00000394925 UBE2V1Q13404 147 aa9.98□□□□□ -0.81
TRAF4-203ENST00000394925 LYRM7Q5U5X0 104 aa9.96□□□□□ -0.82
TRAF4-203ENST00000394925 J3KT08 172 aa9.95□□□□□ -0.82
TRAF4-203ENST00000394925 VAMP8Q9BV40 100 aa9.94□□□□□ -0.82
TRAF4-203ENST00000394925 COX6CP09669 75 aa9.93□□□□□ -0.82
TRAF4-203ENST00000394925 RBM3P98179 157 aaKnown RBP9.92□□□□□ -0.82
TRAF4-203ENST00000394925 K7ERJ3 54 aa9.91□□□□□ -0.82
TRAF4-203ENST00000394925 NDUFB1O75438 58 aa9.91□□□□□ -0.82
TRAF4-203ENST00000394925 DSCR8Q96T75 97 aa9.91□□□□□ -0.82
TRAF4-203ENST00000394925 S100A1P23297 94 aa9.89□□□□□ -0.83
TRAF4-203ENST00000394925 C8orf17Q9NRJ1 99 aa9.88□□□□□ -0.83
TRAF4-203ENST00000394925 NEBP20929 6669 aa9.87□□□□□ -0.83
TRAF4-203ENST00000394925 C21orf62-AS1Q17RA5 79 aa9.85□□□□□ -0.83
TRAF4-203ENST00000394925 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
TRAF4-203ENST00000394925 Q6ZQT0 140 aa9.85□□□□□ -0.83
TRAF4-203ENST00000394925 C9JAW5 83 aa9.83□□□□□ -0.84
TRAF4-203ENST00000394925 IGKV3D-7A0A0C4DH55 119 aa9.82□□□□□ -0.84
TRAF4-203ENST00000394925 HSD52Q0P140 79 aa9.81□□□□□ -0.84
TRAF4-203ENST00000394925 Q6ZVQ6 151 aa9.8□□□□□ -0.84
TRAF4-203ENST00000394925 MUC12Q9UKN1 5478 aa9.77□□□□□ -0.85
TRAF4-203ENST00000394925 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
TRAF4-203ENST00000394925 BAALC-AS2P0C853 105 aa9.76□□□□□ -0.85
TRAF4-203ENST00000394925 A6NN06 94 aa9.7□□□□□ -0.86
TRAF4-203ENST00000394925 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
TRAF4-203ENST00000394925 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
TRAF4-203ENST00000394925 TMEM254Q8TBM7 123 aa9.66□□□□□ -0.86
TRAF4-203ENST00000394925 MMP24-AS1A0A0U1RRL7 71 aa9.65□□□□□ -0.86
TRAF4-203ENST00000394925 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
TRAF4-203ENST00000394925 A0A1B0GW54 56 aa9.64□□□□□ -0.87
TRAF4-203ENST00000394925 IGKV2-30P06310 120 aa9.64□□□□□ -0.87
TRAF4-203ENST00000394925 KRTAP20-1Q3LI63 56 aa9.64□□□□□ -0.87
TRAF4-203ENST00000394925 NDUFS5O43920 106 aa9.63□□□□□ -0.87
TRAF4-203ENST00000394925 LOC110117498A0A087WWA1 95 aa9.62□□□□□ -0.87
TRAF4-203ENST00000394925 JMJD7-PLA2G4BH0Y9G9 81 aa9.62□□□□□ -0.87
TRAF4-203ENST00000394925 hDV103S1A0JD37 113 aa9.59□□□□□ -0.87
TRAF4-203ENST00000394925 MT1BP07438 61 aa9.59□□□□□ -0.87
TRAF4-203ENST00000394925 NREPQ16612 68 aa9.59□□□□□ -0.87
TRAF4-203ENST00000394925 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
TRAF4-203ENST00000394925 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
TRAF4-203ENST00000394925 C7orf65Q6ZTY9 151 aa9.58□□□□□ -0.88
TRAF4-203ENST00000394925 PYY3Q5JQD4 70 aa9.57□□□□□ -0.88
TRAF4-203ENST00000394925 PDE6GP18545 87 aa9.56□□□□□ -0.88
TRAF4-203ENST00000394925 Q5VV11 94 aa9.56□□□□□ -0.88
TRAF4-203ENST00000394925 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
TRAF4-203ENST00000394925 UQCR10Q9UDW1 63 aa9.55□□□□□ -0.88
TRAF4-203ENST00000394925 C5orf47Q569G3 176 aa9.54□□□□□ -0.88
TRAF4-203ENST00000394925 Q5W150 140 aa9.54□□□□□ -0.88
TRAF4-203ENST00000394925 ATXN8Q156A1 80 aa9.53□□□□□ -0.88
TRAF4-203ENST00000394925 K7EQZ3 153 aa9.52□□□□□ -0.89
TRAF4-203ENST00000394925 C4orf26Q17RF5 130 aa9.52□□□□□ -0.89
TRAF4-203ENST00000394925 KRTAP19-8Q3LI54 63 aa9.49□□□□□ -0.89
TRAF4-203ENST00000394925 KRTAP10-5P60370 271 aa9.47□□□□□ -0.89
TRAF4-203ENST00000394925 NAA38Q9BRA0 125 aaKnown RBP9.47□□□□□ -0.89
TRAF4-203ENST00000394925 MDN1Q9NU22 5596 aa9.46□□□□□ -0.89
TRAF4-203ENST00000394925 KRTAP5-9P26371 169 aa9.46□□□□□ -0.9
TRAF4-203ENST00000394925 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
TRAF4-203ENST00000394925 KMT2DO14686 5537 aa9.45□□□□□ -0.9
TRAF4-203ENST00000394925 S4R3F8 94 aa9.38□□□□□ -0.91
TRAF4-203ENST00000394925 HCG22E2RYF7 251 aa9.37□□□□□ -0.91
TRAF4-203ENST00000394925 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
TRAF4-203ENST00000394925 BPY2O14599 106 aa9.36□□□□□ -0.91
TRAF4-203ENST00000394925 KRTAP3-1Q9BYR8 98 aa9.35□□□□□ -0.91
TRAF4-203ENST00000394925 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
TRAF4-203ENST00000394925 LCA10Q71F78 164 aa9.31□□□□□ -0.92
TRAF4-203ENST00000394925 Q8N9L7 120 aa9.31□□□□□ -0.92
TRAF4-203ENST00000394925 CXCL6P80162 114 aa9.29□□□□□ -0.92
TRAF4-203ENST00000394925 KLKP1Q107X0 134 aa9.29□□□□□ -0.92
TRAF4-203ENST00000394925 M0R143 59 aa9.27□□□□□ -0.93
TRAF4-203ENST00000394925 C1orf64Q8NEQ6 169 aa9.27□□□□□ -0.93
TRAF4-203ENST00000394925 IMUPQ9GZP8 106 aa9.26□□□□□ -0.93
TRAF4-203ENST00000394925 KRTAP2-3P0C7H8 128 aa9.25□□□□□ -0.93
TRAF4-203ENST00000394925 KRTAP2-4Q9BYR9 128 aa9.25□□□□□ -0.93
TRAF4-203ENST00000394925 H3BT86 120 aa9.15□□□□□ -0.94
TRAF4-203ENST00000394925 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
TRAF4-203ENST00000394925 TSTD3H0UI37 97 aa9.12□□□□□ -0.95
TRAF4-203ENST00000394925 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
TRAF4-203ENST00000394925 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
TRAF4-203ENST00000394925 SPRR2FQ96RM1 72 aa9.1□□□□□ -0.95
TRAF4-203ENST00000394925 CRIPTQ9P021 101 aa9.1□□□□□ -0.95
TRAF4-203ENST00000394925 SPRR2EP22531 72 aa9.09□□□□□ -0.95
TRAF4-203ENST00000394925 SPRR2BP35325 72 aa9.09□□□□□ -0.95
TRAF4-203ENST00000394925 SPRR2AP35326 72 aa9.09□□□□□ -0.95
TRAF4-203ENST00000394925 BATFQ16520 125 aa9.03□□□□□ -0.96
TRAF4-203ENST00000394925 A0A087WVE0 104 aa8.99□□□□□ -0.97
TRAF4-203ENST00000394925 C9orf118A6NHY6 69 aa8.97□□□□□ -0.97
TRAF4-203ENST00000394925 UBL5Q9BZL1 73 aa8.96□□□□□ -0.98
TRAF4-203ENST00000394925 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
TRAF4-203ENST00000394925 A0A1W2PPM0 123 aa8.95□□□□□ -0.98
TRAF4-203ENST00000394925 KRTAP2-2Q9BYT5 123 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms