RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 SPANXA2-OT1Q8N9U9 137 aa9.08□□□□□ -0.96
UBE2D3-207ENST00000394801 PSPHP1O15172 72 aa9.08□□□□□ -0.96
UBE2D3-207ENST00000394801 LINC00208Q96KT6 92 aa9.08□□□□□ -0.96
UBE2D3-207ENST00000394801 LRP1BQ9NZR2 4599 aa9.07□□□□□ -0.96
UBE2D3-207ENST00000394801 H0Y9P7 68 aa9.06□□□□□ -0.96
UBE2D3-207ENST00000394801 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
UBE2D3-207ENST00000394801 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
UBE2D3-207ENST00000394801 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
UBE2D3-207ENST00000394801 CD164Q04900 197 aa9.05□□□□□ -0.96
UBE2D3-207ENST00000394801 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
UBE2D3-207ENST00000394801 KRTAP10-1P60331 282 aa9.04□□□□□ -0.96
UBE2D3-207ENST00000394801 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.96
UBE2D3-207ENST00000394801 A8MUN3 132 aa9.01□□□□□ -0.97
UBE2D3-207ENST00000394801 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
UBE2D3-207ENST00000394801 IGHV6-1A0A0B4J1U7 121 aa9□□□□□ -0.97
UBE2D3-207ENST00000394801 PMAIP1Q13794 54 aa8.99□□□□□ -0.97
UBE2D3-207ENST00000394801 Q5VV11 94 aa8.98□□□□□ -0.97
UBE2D3-207ENST00000394801 LIMD2Q9BT23 127 aa8.98□□□□□ -0.97
UBE2D3-207ENST00000394801 SEC61GP60059 68 aa8.97□□□□□ -0.97
UBE2D3-207ENST00000394801 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
UBE2D3-207ENST00000394801 MRPL34Q9BQ48 92 aaKnown RBP8.96□□□□□ -0.98
UBE2D3-207ENST00000394801 A0A087X002 238 aa8.95□□□□□ -0.98
UBE2D3-207ENST00000394801 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
UBE2D3-207ENST00000394801 BIRC6Q9NR09 4857 aa8.94□□□□□ -0.98
UBE2D3-207ENST00000394801 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
UBE2D3-207ENST00000394801 SACSQ9NZJ4 4579 aa8.92□□□□□ -0.98
UBE2D3-207ENST00000394801 SPINK6Q6UWN8 80 aa8.92□□□□□ -0.98
UBE2D3-207ENST00000394801 VPS13BQ7Z7G8 4022 aa8.9□□□□□ -0.98
UBE2D3-207ENST00000394801 IGLV7-46A0A075B6I9 117 aa8.9□□□□□ -0.98
UBE2D3-207ENST00000394801 KRTAP1-4P0C5Y4 121 aa8.9□□□□□ -0.99
UBE2D3-207ENST00000394801 NDUFS5O43920 106 aa8.89□□□□□ -0.99
UBE2D3-207ENST00000394801 CHKB-CPT1BH3BT56 60 aa8.88□□□□□ -0.99
UBE2D3-207ENST00000394801 PRR15LQ9BU68 103 aa8.87□□□□□ -0.99
UBE2D3-207ENST00000394801 C8orf87E5RJ46 101 aa8.87□□□□□ -0.99
UBE2D3-207ENST00000394801 COA5Q86WW8 74 aa8.87□□□□□ -0.99
UBE2D3-207ENST00000394801 EPPK1P58107 5090 aaKnown RBP8.86□□□□□ -0.99
UBE2D3-207ENST00000394801 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
UBE2D3-207ENST00000394801 A8MU10 97 aa8.85□□□□□ -0.99
UBE2D3-207ENST00000394801 Q75L30 129 aa8.85□□□□□ -0.99
UBE2D3-207ENST00000394801 KRTAP17-1Q9BYP8 105 aa8.85□□□□□ -0.99
UBE2D3-207ENST00000394801 PKHD1P08F94 4074 aa8.82□□□□□ -1
UBE2D3-207ENST00000394801 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
UBE2D3-207ENST00000394801 PCOTHQ58A44 107 aa8.8□□□□□ -1
UBE2D3-207ENST00000394801 Q5W150 140 aa8.79□□□□□ -1
UBE2D3-207ENST00000394801 RYR2Q92736 4967 aa8.79□□□□□ -1
UBE2D3-207ENST00000394801 LINC00313P59037 77 aa8.79□□□□□ -1
UBE2D3-207ENST00000394801 PLA2G1BP04054 148 aaKnown RBP8.78□□□□□ -1
UBE2D3-207ENST00000394801 ATP11AUNQ6ZP68 121 aa8.78□□□□□ -1
UBE2D3-207ENST00000394801 DYNC1H1Q14204 4646 aaKnown RBP8.78□□□□□ -1
UBE2D3-207ENST00000394801 LCA10Q71F78 164 aa8.77□□□□□ -1.01
UBE2D3-207ENST00000394801 A6NED7 52 aa8.77□□□□□ -1.01
UBE2D3-207ENST00000394801 LINC01558Q9Y6Z2 57 aa8.76□□□□□ -1.01
UBE2D3-207ENST00000394801 TYMSOSQ8TAI1 123 aa8.73□□□□□ -1.01
UBE2D3-207ENST00000394801 CDC42SE1Q9NRR8 79 aa8.73□□□□□ -1.01
UBE2D3-207ENST00000394801 KTN1-AS1Q86SY8 53 aa8.73□□□□□ -1.01
UBE2D3-207ENST00000394801 SPINK1P00995 79 aa8.72□□□□□ -1.01
UBE2D3-207ENST00000394801 SPTSSBQ8NFR3 76 aa8.72□□□□□ -1.01
UBE2D3-207ENST00000394801 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
UBE2D3-207ENST00000394801 A0A1B0GVY2 172 aa8.71□□□□□ -1.02
UBE2D3-207ENST00000394801 KRTAP16-1A8MUX0 517 aa8.71□□□□□ -1.02
UBE2D3-207ENST00000394801 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
UBE2D3-207ENST00000394801 SPAG11AQ6PDA7 123 aa8.69□□□□□ -1.02
UBE2D3-207ENST00000394801 A6NN06 94 aa8.68□□□□□ -1.02
UBE2D3-207ENST00000394801 HRES1P13985 223 aa8.68□□□□□ -1.02
UBE2D3-207ENST00000394801 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-207ENST00000394801 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-207ENST00000394801 FAT1Q14517 4588 aa8.64□□□□□ -1.03
UBE2D3-207ENST00000394801 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
UBE2D3-207ENST00000394801 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-207ENST00000394801 LINC00304Q8N9R0 145 aa8.62□□□□□ -1.03
UBE2D3-207ENST00000394801 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-207ENST00000394801 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
UBE2D3-207ENST00000394801 SPINK7P58062 85 aa8.58□□□□□ -1.04
UBE2D3-207ENST00000394801 RBM12B-AS1Q9P1G2 102 aa8.57□□□□□ -1.04
UBE2D3-207ENST00000394801 RETNLBQ9BQ08 111 aa8.56□□□□□ -1.04
UBE2D3-207ENST00000394801 PKHD1L1Q86WI1 4243 aa8.55□□□□□ -1.04
UBE2D3-207ENST00000394801 C7orf65Q6ZTY9 151 aa8.55□□□□□ -1.04
UBE2D3-207ENST00000394801 ACYP2P14621 99 aa8.54□□□□□ -1.04
UBE2D3-207ENST00000394801 DMAC1Q96GE9 116 aa8.54□□□□□ -1.04
UBE2D3-207ENST00000394801 HERC2O95714 4834 aa8.52□□□□□ -1.05
UBE2D3-207ENST00000394801 PCLOQ9Y6V0 5065 aa8.46□□□□□ -1.06
UBE2D3-207ENST00000394801 IGKV2D-30A0A075B6S6 120 aa8.45□□□□□ -1.06
UBE2D3-207ENST00000394801 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.07
UBE2D3-207ENST00000394801 A8MUU9 505 aa8.39□□□□□ -1.07
UBE2D3-207ENST00000394801 RYR1P21817 5038 aa8.39□□□□□ -1.07
UBE2D3-207ENST00000394801 A0A1B0GU69 56 aa8.35□□□□□ -1.07
UBE2D3-207ENST00000394801 C9orf92A6NGG3 77 aa8.34□□□□□ -1.07
UBE2D3-207ENST00000394801 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
UBE2D3-207ENST00000394801 FAT3Q8TDW7 4589 aa8.32□□□□□ -1.08
UBE2D3-207ENST00000394801 HSPG2P98160 4391 aa8.31□□□□□ -1.08
UBE2D3-207ENST00000394801 FLG2Q5D862 2391 aaPredicted RBP8.31□□□□□ -1.08
UBE2D3-207ENST00000394801 TNXBP22105 4242 aa8.3□□□□□ -1.08
UBE2D3-207ENST00000394801 LRP1Q07954 4544 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-207ENST00000394801 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
UBE2D3-207ENST00000394801 Q8N1X5 172 aa8.28□□□□□ -1.08
UBE2D3-207ENST00000394801 UQCR11O14957 56 aa8.26□□□□□ -1.09
UBE2D3-207ENST00000394801 Q5VSD8 79 aa8.25□□□□□ -1.09
UBE2D3-207ENST00000394801 MIR22HGQ0VDD5 57 aa8.24□□□□□ -1.09
UBE2D3-207ENST00000394801 PRAC1Q96KF2 57 aa8.24□□□□□ -1.09
UBE2D3-207ENST00000394801 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms