RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 hDV103S1A0JD37 113 aa11.74□□□□□ -0.53
PRKCD-202ENST00000394729 HSPG2P98160 4391 aa11.72□□□□□ -0.53
PRKCD-202ENST00000394729 A0A1B0GVX0 72 aa11.71□□□□□ -0.53
PRKCD-202ENST00000394729 KRTAP29-1A8MX34 341 aaPredicted RBP11.71□□□□□ -0.54
PRKCD-202ENST00000394729 C8orf17Q9NRJ1 99 aa11.7□□□□□ -0.54
PRKCD-202ENST00000394729 FAM229BQ4G0N7 80 aa11.7□□□□□ -0.54
PRKCD-202ENST00000394729 KRTAP10-4P60372 401 aaPredicted RBP11.68□□□□□ -0.54
PRKCD-202ENST00000394729 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
PRKCD-202ENST00000394729 RETNLBQ9BQ08 111 aa11.67□□□□□ -0.54
PRKCD-202ENST00000394729 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
PRKCD-202ENST00000394729 PRR4Q16378 134 aa11.65□□□□□ -0.54
PRKCD-202ENST00000394729 H7BZZ5 65 aa11.65□□□□□ -0.54
PRKCD-202ENST00000394729 KRTAP17-1Q9BYP8 105 aa11.65□□□□□ -0.54
PRKCD-202ENST00000394729 LINC00208Q96KT6 92 aa11.64□□□□□ -0.55
PRKCD-202ENST00000394729 RPS28P62857 69 aaKnown RBP11.64□□□□□ -0.55
PRKCD-202ENST00000394729 Q5VSD8 79 aa11.64□□□□□ -0.55
PRKCD-202ENST00000394729 Q5XG85 94 aa11.64□□□□□ -0.55
PRKCD-202ENST00000394729 LINC00304Q8N9R0 145 aa11.63□□□□□ -0.55
PRKCD-202ENST00000394729 TMEM258P61165 79 aa11.62□□□□□ -0.55
PRKCD-202ENST00000394729 KLKP1Q107X0 134 aa11.62□□□□□ -0.55
PRKCD-202ENST00000394729 CD164Q04900 197 aa11.62□□□□□ -0.55
PRKCD-202ENST00000394729 FAM229AH3BQW9 127 aa11.61□□□□□ -0.55
PRKCD-202ENST00000394729 RYR1P21817 5038 aa11.61□□□□□ -0.55
PRKCD-202ENST00000394729 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
PRKCD-202ENST00000394729 H0Y9P7 68 aa11.59□□□□□ -0.55
PRKCD-202ENST00000394729 PKHD1L1Q86WI1 4243 aa11.58□□□□□ -0.56
PRKCD-202ENST00000394729 MRPL34Q9BQ48 92 aaKnown RBP11.55□□□□□ -0.56
PRKCD-202ENST00000394729 MP68P56378 58 aa11.54□□□□□ -0.56
PRKCD-202ENST00000394729 LIMD2Q9BT23 127 aa11.54□□□□□ -0.56
PRKCD-202ENST00000394729 SPINK1P00995 79 aa11.52□□□□□ -0.56
PRKCD-202ENST00000394729 LINC00313P59037 77 aa11.52□□□□□ -0.56
PRKCD-202ENST00000394729 FAM236DA0A1B0GTK5 79 aa11.51□□□□□ -0.57
PRKCD-202ENST00000394729 FAM236CP0DP71 79 aa11.51□□□□□ -0.57
PRKCD-202ENST00000394729 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
PRKCD-202ENST00000394729 C9orf92A6NGG3 77 aa11.49□□□□□ -0.57
PRKCD-202ENST00000394729 TRAV22A0A0B4J277 110 aa11.49□□□□□ -0.57
PRKCD-202ENST00000394729 C1orf64Q8NEQ6 169 aa11.49□□□□□ -0.57
PRKCD-202ENST00000394729 Q5W150 140 aa11.46□□□□□ -0.57
PRKCD-202ENST00000394729 ASB16-AS1Q495Z4 193 aa11.43□□□□□ -0.58
PRKCD-202ENST00000394729 Q8N1X5 172 aa11.43□□□□□ -0.58
PRKCD-202ENST00000394729 ZCCHC13Q8WW36 166 aaKnown RBP11.4□□□□□ -0.59
PRKCD-202ENST00000394729 NDUFC1O43677 76 aa11.37□□□□□ -0.59
PRKCD-202ENST00000394729 FAT3Q8TDW7 4589 aa11.37□□□□□ -0.59
PRKCD-202ENST00000394729 TNXBP22105 4242 aa11.35□□□□□ -0.59
PRKCD-202ENST00000394729 SPAG11AQ6PDA7 123 aa11.34□□□□□ -0.59
PRKCD-202ENST00000394729 TP53AIP1Q9HCN2 124 aa11.34□□□□□ -0.59
PRKCD-202ENST00000394729 C8orf87E5RJ46 101 aa11.33□□□□□ -0.6
PRKCD-202ENST00000394729 FP248Q71RG6 208 aaPredicted RBP11.32□□□□□ -0.6
PRKCD-202ENST00000394729 KRTAP4-5Q9BYR2 181 aa11.31□□□□□ -0.6
PRKCD-202ENST00000394729 KRTAP16-1A8MUX0 517 aa11.29□□□□□ -0.6
PRKCD-202ENST00000394729 SERP1Q9Y6X1 66 aa11.28□□□□□ -0.6
PRKCD-202ENST00000394729 PRO0628Q9UI54 55 aa11.28□□□□□ -0.6
PRKCD-202ENST00000394729 Q8N9P0 234 aaPredicted RBP11.27□□□□□ -0.61
PRKCD-202ENST00000394729 IGKV2D-30A0A075B6S6 120 aa11.26□□□□□ -0.61
PRKCD-202ENST00000394729 IGKV2-30P06310 120 aa11.26□□□□□ -0.61
PRKCD-202ENST00000394729 BRK1Q8WUW1 75 aa11.23□□□□□ -0.61
PRKCD-202ENST00000394729 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
PRKCD-202ENST00000394729 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.61
PRKCD-202ENST00000394729 KRTAP10-8P60410 259 aa11.2□□□□□ -0.62
PRKCD-202ENST00000394729 SMIM26A0A096LP01 95 aa11.17□□□□□ -0.62
PRKCD-202ENST00000394729 RPS29P62273 56 aaKnown RBP11.17□□□□□ -0.62
PRKCD-202ENST00000394729 KRTAP13-3Q3SY46 172 aa11.17□□□□□ -0.62
PRKCD-202ENST00000394729 H3BPC8 53 aa11.16□□□□□ -0.62
PRKCD-202ENST00000394729 CYP4F30PQ9H0H9 118 aa11.14□□□□□ -0.63
PRKCD-202ENST00000394729 MT1HL1P0DM35 61 aa11.1□□□□□ -0.63
PRKCD-202ENST00000394729 ATP5EP56381 51 aaPredicted RBP11.1□□□□□ -0.63
PRKCD-202ENST00000394729 LOC101927531A0A1B0GV80 90 aa11.09□□□□□ -0.63
PRKCD-202ENST00000394729 HRES1P13985 223 aa11.06□□□□□ -0.64
PRKCD-202ENST00000394729 HERC2O95714 4834 aa11.04□□□□□ -0.64
PRKCD-202ENST00000394729 LPAP08519 4548 aa11.04□□□□□ -0.64
PRKCD-202ENST00000394729 IGLV7-46A0A075B6I9 117 aa11.03□□□□□ -0.64
PRKCD-202ENST00000394729 SPANXA2-OT1Q8N9U9 137 aa10.99□□□□□ -0.65
PRKCD-202ENST00000394729 COA5Q86WW8 74 aa10.97□□□□□ -0.65
PRKCD-202ENST00000394729 LRP2P98164 4655 aa10.96□□□□□ -0.65
PRKCD-202ENST00000394729 V9GYY9 64 aa10.95□□□□□ -0.66
PRKCD-202ENST00000394729 SEC61GP60059 68 aa10.94□□□□□ -0.66
PRKCD-202ENST00000394729 C20orf166-AS1Q96NR2 134 aa10.92□□□□□ -0.66
PRKCD-202ENST00000394729 A8MUU9 505 aa10.91□□□□□ -0.66
PRKCD-202ENST00000394729 PSPHP1O15172 72 aa10.89□□□□□ -0.67
PRKCD-202ENST00000394729 C7orf65Q6ZTY9 151 aa10.88□□□□□ -0.67
PRKCD-202ENST00000394729 BIRC6Q9NR09 4857 aa10.87□□□□□ -0.67
PRKCD-202ENST00000394729 SPINK7P58062 85 aa10.85□□□□□ -0.67
PRKCD-202ENST00000394729 J3QL48 77 aa10.85□□□□□ -0.67
PRKCD-202ENST00000394729 XP32Q5T750 250 aa10.85□□□□□ -0.67
PRKCD-202ENST00000394729 ATP11AUNQ6ZP68 121 aa10.83□□□□□ -0.68
PRKCD-202ENST00000394729 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
PRKCD-202ENST00000394729 A8MU10 97 aa10.8□□□□□ -0.68
PRKCD-202ENST00000394729 CHKB-CPT1BH3BT56 60 aa10.8□□□□□ -0.68
PRKCD-202ENST00000394729 Q75L30 129 aa10.78□□□□□ -0.68
PRKCD-202ENST00000394729 ACYP2P14621 99 aa10.76□□□□□ -0.69
PRKCD-202ENST00000394729 DMAC1Q96GE9 116 aa10.75□□□□□ -0.69
PRKCD-202ENST00000394729 HERC1Q15751 4861 aa10.74□□□□□ -0.69
PRKCD-202ENST00000394729 A8MUN3 132 aa10.73□□□□□ -0.69
PRKCD-202ENST00000394729 PMAIP1Q13794 54 aa10.71□□□□□ -0.7
PRKCD-202ENST00000394729 RPL37P61927 97 aaKnown RBP10.7□□□□□ -0.7
PRKCD-202ENST00000394729 PRR15LQ9BU68 103 aa10.68□□□□□ -0.7
PRKCD-202ENST00000394729 MUC2Q02817 5179 aa10.66□□□□□ -0.7
PRKCD-202ENST00000394729 Q1T7F1 81 aa10.63□□□□□ -0.71
PRKCD-202ENST00000394729 KRTAP3-1Q9BYR8 98 aa10.62□□□□□ -0.71
PRKCD-202ENST00000394729 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms