RNA–Protein interactions for RNA: ENST00000394684.8

SGMS2-202, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 6,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-202ENST00000394684 CFAP47Q6ZTR5 3102 aa5.07□□□□□ -1.6
SGMS2-202ENST00000394684 UTP20O75691 2785 aaKnown RBP5.06□□□□□ -1.6
SGMS2-202ENST00000394684 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
SGMS2-202ENST00000394684 LAMA5O15230 3695 aa5.04□□□□□ -1.6
SGMS2-202ENST00000394684 ASPMQ8IZT6 3477 aa5.04□□□□□ -1.6
SGMS2-202ENST00000394684 UBR5O95071 2799 aaPredicted RBP5.03□□□□□ -1.6
SGMS2-202ENST00000394684 DCHS1Q96JQ0 3298 aa5.03□□□□□ -1.6
SGMS2-202ENST00000394684 A8MU10 97 aa5.02□□□□□ -1.61
SGMS2-202ENST00000394684 APCP25054 2843 aa5.01□□□□□ -1.61
SGMS2-202ENST00000394684 TNP1P09430 55 aa5.01□□□□□ -1.61
SGMS2-202ENST00000394684 NOTCH1P46531 2555 aa5.01□□□□□ -1.61
SGMS2-202ENST00000394684 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
SGMS2-202ENST00000394684 WDFY3Q8IZQ1 3526 aa4.99□□□□□ -1.61
SGMS2-202ENST00000394684 RELNP78509 3460 aa4.99□□□□□ -1.61
SGMS2-202ENST00000394684 CRYBG3Q68DQ2 2970 aa4.98□□□□□ -1.61
SGMS2-202ENST00000394684 HIVEP1P15822 2718 aa4.98□□□□□ -1.61
SGMS2-202ENST00000394684 ZANQ9Y493 2812 aa4.97□□□□□ -1.61
SGMS2-202ENST00000394684 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
SGMS2-202ENST00000394684 KRTAP29-1A8MX34 341 aaPredicted RBP4.97□□□□□ -1.61
SGMS2-202ENST00000394684 RPS29P62273 56 aaKnown RBP4.97□□□□□ -1.61
SGMS2-202ENST00000394684 C10orf95Q9H7T3 257 aa4.97□□□□□ -1.61
SGMS2-202ENST00000394684 KRTAP4-16G5E9R7 235 aaPredicted RBP4.96□□□□□ -1.62
SGMS2-202ENST00000394684 CELSR2Q9HCU4 2923 aa4.95□□□□□ -1.62
SGMS2-202ENST00000394684 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
SGMS2-202ENST00000394684 HRNRQ86YZ3 2850 aaPredicted RBP4.94□□□□□ -1.62
SGMS2-202ENST00000394684 KRTAP10-8P60410 259 aa4.91□□□□□ -1.62
SGMS2-202ENST00000394684 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
SGMS2-202ENST00000394684 NSD1Q96L73 2696 aaPredicted RBP4.9□□□□□ -1.62
SGMS2-202ENST00000394684 DCHS2Q6V1P9 2916 aa4.9□□□□□ -1.63
SGMS2-202ENST00000394684 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
SGMS2-202ENST00000394684 NBEAL2Q6ZNJ1 2754 aa4.89□□□□□ -1.63
SGMS2-202ENST00000394684 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
SGMS2-202ENST00000394684 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
SGMS2-202ENST00000394684 Q6ZRN7 208 aaPredicted RBP4.86□□□□□ -1.63
SGMS2-202ENST00000394684 NIPBLQ6KC79 2804 aaeCLIP4.85□□□□□ -1.63
SGMS2-202ENST00000394684 ZFHX4Q86UP3 3567 aa4.85□□□□□ -1.63
SGMS2-202ENST00000394684 KMT2BQ9UMN6 2715 aaPredicted RBP4.84□□□□□ -1.63
SGMS2-202ENST00000394684 NF1P21359 2839 aa4.83□□□□□ -1.64
SGMS2-202ENST00000394684 SMG1Q96Q15 3661 aaKnown RBP4.82□□□□□ -1.64
SGMS2-202ENST00000394684 TENM4Q6N022 2769 aa4.82□□□□□ -1.64
SGMS2-202ENST00000394684 ASH1LQ9NR48 2969 aaKnown RBP4.81□□□□□ -1.64
SGMS2-202ENST00000394684 FBN2P35556 2912 aa4.79□□□□□ -1.64
SGMS2-202ENST00000394684 A6NN06 94 aa4.79□□□□□ -1.64
SGMS2-202ENST00000394684 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
SGMS2-202ENST00000394684 KRTAP7-1Q8IUC3 87 aa4.76□□□□□ -1.65
SGMS2-202ENST00000394684 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
SGMS2-202ENST00000394684 MXRA5Q9NR99 2828 aa4.75□□□□□ -1.65
SGMS2-202ENST00000394684 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
SGMS2-202ENST00000394684 KRTAP13-1Q8IUC0 172 aa4.74□□□□□ -1.65
SGMS2-202ENST00000394684 P0C880 135 aa4.71□□□□□ -1.66
SGMS2-202ENST00000394684 XP32Q5T750 250 aa4.7□□□□□ -1.66
SGMS2-202ENST00000394684 KRTAP21-3Q3LHN1 58 aa4.7□□□□□ -1.66
SGMS2-202ENST00000394684 PDZD2O15018 2839 aa4.68□□□□□ -1.66
SGMS2-202ENST00000394684 NBPF19A0A087WUL8 3843 aa4.67□□□□□ -1.66
SGMS2-202ENST00000394684 SPENQ96T58 3664 aaKnown RBP4.65□□□□□ -1.66
SGMS2-202ENST00000394684 OTOGQ6ZRI0 2925 aa4.64□□□□□ -1.67
SGMS2-202ENST00000394684 CSMD1Q96PZ7 3565 aa4.62□□□□□ -1.67
SGMS2-202ENST00000394684 CELSR1Q9NYQ6 3014 aa4.62□□□□□ -1.67
SGMS2-202ENST00000394684 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
SGMS2-202ENST00000394684 BSNQ9UPA5 3926 aa4.61□□□□□ -1.67
SGMS2-202ENST00000394684 ZFHX3Q15911 3703 aa4.6□□□□□ -1.67
SGMS2-202ENST00000394684 TENM1Q9UKZ4 2725 aa4.59□□□□□ -1.67
SGMS2-202ENST00000394684 SVEP1Q4LDE5 3571 aa4.59□□□□□ -1.68
SGMS2-202ENST00000394684 CSMD2Q7Z408 3487 aa4.57□□□□□ -1.68
SGMS2-202ENST00000394684 KRTAP1-4P0C5Y4 121 aa4.56□□□□□ -1.68
SGMS2-202ENST00000394684 H0YAA0 97 aa4.53□□□□□ -1.68
SGMS2-202ENST00000394684 FBN1P35555 2871 aaKnown RBP4.52□□□□□ -1.69
SGMS2-202ENST00000394684 VWFP04275 2813 aa4.49□□□□□ -1.69
SGMS2-202ENST00000394684 KRTAP13-3Q3SY46 172 aa4.48□□□□□ -1.69
SGMS2-202ENST00000394684 TENM3Q9P273 2699 aa4.48□□□□□ -1.69
SGMS2-202ENST00000394684 CUBNO60494 3623 aa4.43□□□□□ -1.7
SGMS2-202ENST00000394684 PKD1L1Q8TDX9 2849 aa4.41□□□□□ -1.7
SGMS2-202ENST00000394684 ANK3Q12955 4377 aaKnown RBP4.39□□□□□ -1.71
SGMS2-202ENST00000394684 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
SGMS2-202ENST00000394684 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
SGMS2-202ENST00000394684 TGP01266 2768 aa4.36□□□□□ -1.71
SGMS2-202ENST00000394684 TRRAPQ9Y4A5 3859 aa4.34□□□□□ -1.71
SGMS2-202ENST00000394684 VPS13CQ709C8 3753 aa4.34□□□□□ -1.72
SGMS2-202ENST00000394684 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
SGMS2-202ENST00000394684 KRTAP13-4Q3LI77 160 aa4.29□□□□□ -1.72
SGMS2-202ENST00000394684 ZNF469Q96JG9 3925 aaPredicted RBP4.29□□□□□ -1.72
SGMS2-202ENST00000394684 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
SGMS2-202ENST00000394684 AKAP9Q99996 3911 aa4.19□□□□□ -1.74
SGMS2-202ENST00000394684 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
SGMS2-202ENST00000394684 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
SGMS2-202ENST00000394684 COL7A1Q02388 2944 aa4.07□□□□□ -1.76
SGMS2-202ENST00000394684 SRRM2Q9UQ35 2752 aaKnown RBP4.07□□□□□ -1.76
SGMS2-202ENST00000394684 MEGF8Q7Z7M0 2845 aa4.06□□□□□ -1.76
SGMS2-202ENST00000394684 KRTAP3-1Q9BYR8 98 aa4.02□□□□□ -1.77
SGMS2-202ENST00000394684 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
SGMS2-202ENST00000394684 HUWE1Q7Z6Z7 4374 aaKnown RBP4□□□□□ -1.77
SGMS2-202ENST00000394684 INE1O15225 51 aa3.96□□□□□ -1.77
SGMS2-202ENST00000394684 DNHD1Q96M86 4753 aa3.96□□□□□ -1.78
SGMS2-202ENST00000394684 KRTAP10-6P60371 365 aaPredicted RBP3.93□□□□□ -1.78
SGMS2-202ENST00000394684 DNAH9Q9NYC9 4486 aa3.91□□□□□ -1.78
SGMS2-202ENST00000394684 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
SGMS2-202ENST00000394684 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
SGMS2-202ENST00000394684 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
SGMS2-202ENST00000394684 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
SGMS2-202ENST00000394684 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms