RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SPINK1P00995 79 aa11.25□□□□□ -0.61
RAB5C-202ENST00000393860 Q5XG85 94 aa11.25□□□□□ -0.61
RAB5C-202ENST00000393860 CASC2Q6XLA1 102 aa11.25□□□□□ -0.61
RAB5C-202ENST00000393860 TRAV7A0A075B6U4 112 aa11.24□□□□□ -0.61
RAB5C-202ENST00000393860 UQCRQO14949 82 aa11.23□□□□□ -0.61
RAB5C-202ENST00000393860 KRTAP29-1A8MX34 341 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-202ENST00000393860 NOTCH2NLQ7Z3S9 236 aa11.22□□□□□ -0.61
RAB5C-202ENST00000393860 OCR1Q9BZK8 76 aa11.21□□□□□ -0.61
RAB5C-202ENST00000393860 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.61
RAB5C-202ENST00000393860 Q8N1X5 172 aa11.2□□□□□ -0.62
RAB5C-202ENST00000393860 SPAG11AQ6PDA7 123 aa11.19□□□□□ -0.62
RAB5C-202ENST00000393860 hDV103S1A0JD37 113 aa11.17□□□□□ -0.62
RAB5C-202ENST00000393860 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
RAB5C-202ENST00000393860 SEC61GP60059 68 aa11.16□□□□□ -0.62
RAB5C-202ENST00000393860 C20orf197Q8N268 126 aa11.13□□□□□ -0.63
RAB5C-202ENST00000393860 RPS29P62273 56 aaKnown RBP11.13□□□□□ -0.63
RAB5C-202ENST00000393860 CYSTM1Q9H1C7 97 aa11.12□□□□□ -0.63
RAB5C-202ENST00000393860 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
RAB5C-202ENST00000393860 SNURFQ9Y675 71 aa11.09□□□□□ -0.63
RAB5C-202ENST00000393860 FAT3Q8TDW7 4589 aa11.08□□□□□ -0.64
RAB5C-202ENST00000393860 TNXBP22105 4242 aa11.08□□□□□ -0.64
RAB5C-202ENST00000393860 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
RAB5C-202ENST00000393860 NDUFS5O43920 106 aa11.06□□□□□ -0.64
RAB5C-202ENST00000393860 MRPL34Q9BQ48 92 aaKnown RBP11.06□□□□□ -0.64
RAB5C-202ENST00000393860 FLG2Q5D862 2391 aaPredicted RBP11.05□□□□□ -0.64
RAB5C-202ENST00000393860 TMEM254Q8TBM7 123 aa11.05□□□□□ -0.64
RAB5C-202ENST00000393860 C8orf87E5RJ46 101 aa11.05□□□□□ -0.64
RAB5C-202ENST00000393860 LINC00313P59037 77 aa11.05□□□□□ -0.64
RAB5C-202ENST00000393860 KRTAP4-5Q9BYR2 181 aa11.05□□□□□ -0.64
RAB5C-202ENST00000393860 PRO0628Q9UI54 55 aa11.05□□□□□ -0.64
RAB5C-202ENST00000393860 MYCBP2O75592 4640 aa10.99□□□□□ -0.65
RAB5C-202ENST00000393860 A0A0U1RQV1 116 aa10.97□□□□□ -0.65
RAB5C-202ENST00000393860 KLKP1Q107X0 134 aa10.97□□□□□ -0.65
RAB5C-202ENST00000393860 MT1HL1P0DM35 61 aa10.96□□□□□ -0.65
RAB5C-202ENST00000393860 H0Y9P7 68 aa10.96□□□□□ -0.66
RAB5C-202ENST00000393860 KRTAP16-1A8MUX0 517 aa10.95□□□□□ -0.66
RAB5C-202ENST00000393860 V9GYY9 64 aa10.95□□□□□ -0.66
RAB5C-202ENST00000393860 C4orf26Q17RF5 130 aa10.93□□□□□ -0.66
RAB5C-202ENST00000393860 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
RAB5C-202ENST00000393860 C9orf92A6NGG3 77 aa10.92□□□□□ -0.66
RAB5C-202ENST00000393860 TRAV22A0A0B4J277 110 aa10.91□□□□□ -0.66
RAB5C-202ENST00000393860 MP68P56378 58 aa10.91□□□□□ -0.66
RAB5C-202ENST00000393860 LINC00208Q96KT6 92 aa10.91□□□□□ -0.66
RAB5C-202ENST00000393860 H7BZZ5 65 aa10.88□□□□□ -0.67
RAB5C-202ENST00000393860 TMEM258P61165 79 aa10.88□□□□□ -0.67
RAB5C-202ENST00000393860 BIRC6Q9NR09 4857 aa10.88□□□□□ -0.67
RAB5C-202ENST00000393860 Q8N9P0 234 aaPredicted RBP10.87□□□□□ -0.67
RAB5C-202ENST00000393860 ZCCHC13Q8WW36 166 aaKnown RBP10.87□□□□□ -0.67
RAB5C-202ENST00000393860 Q5W150 140 aa10.86□□□□□ -0.67
RAB5C-202ENST00000393860 C1orf64Q8NEQ6 169 aa10.84□□□□□ -0.67
RAB5C-202ENST00000393860 OXTP01178 125 aa10.82□□□□□ -0.68
RAB5C-202ENST00000393860 DMBT1Q9UGM3 2413 aaPredicted RBP10.82□□□□□ -0.68
RAB5C-202ENST00000393860 NDUFC1O43677 76 aa10.8□□□□□ -0.68
RAB5C-202ENST00000393860 KRTAP13-3Q3SY46 172 aa10.78□□□□□ -0.68
RAB5C-202ENST00000393860 H3BPC8 53 aa10.78□□□□□ -0.68
RAB5C-202ENST00000393860 ABCA13Q86UQ4 5058 aa10.77□□□□□ -0.68
RAB5C-202ENST00000393860 HERC2O95714 4834 aa10.77□□□□□ -0.68
RAB5C-202ENST00000393860 FAM236DA0A1B0GTK5 79 aa10.74□□□□□ -0.69
RAB5C-202ENST00000393860 FAM236CP0DP71 79 aa10.74□□□□□ -0.69
RAB5C-202ENST00000393860 IGLV7-46A0A075B6I9 117 aa10.72□□□□□ -0.69
RAB5C-202ENST00000393860 PCOTHQ58A44 107 aa10.72□□□□□ -0.69
RAB5C-202ENST00000393860 FP248Q71RG6 208 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-202ENST00000393860 PRR4Q16378 134 aa10.68□□□□□ -0.7
RAB5C-202ENST00000393860 C20orf166-AS1Q96NR2 134 aa10.68□□□□□ -0.7
RAB5C-202ENST00000393860 A8MUU9 505 aa10.67□□□□□ -0.7
RAB5C-202ENST00000393860 LOC101927531A0A1B0GV80 90 aa10.66□□□□□ -0.7
RAB5C-202ENST00000393860 J3QL48 77 aa10.62□□□□□ -0.71
RAB5C-202ENST00000393860 CYP4F30PQ9H0H9 118 aa10.62□□□□□ -0.71
RAB5C-202ENST00000393860 IGKV2D-30A0A075B6S6 120 aa10.6□□□□□ -0.71
RAB5C-202ENST00000393860 IGKV2-30P06310 120 aa10.6□□□□□ -0.71
RAB5C-202ENST00000393860 ATP5EP56381 51 aaPredicted RBP10.57□□□□□ -0.72
RAB5C-202ENST00000393860 Q75L30 129 aa10.56□□□□□ -0.72
RAB5C-202ENST00000393860 SERP1Q9Y6X1 66 aa10.56□□□□□ -0.72
RAB5C-202ENST00000393860 XP32Q5T750 250 aa10.56□□□□□ -0.72
RAB5C-202ENST00000393860 SPANXA2-OT1Q8N9U9 137 aa10.52□□□□□ -0.73
RAB5C-202ENST00000393860 SMIM26A0A096LP01 95 aa10.51□□□□□ -0.73
RAB5C-202ENST00000393860 HRES1P13985 223 aa10.48□□□□□ -0.73
RAB5C-202ENST00000393860 RPL37P61927 97 aaKnown RBP10.48□□□□□ -0.73
RAB5C-202ENST00000393860 C7orf65Q6ZTY9 151 aa10.46□□□□□ -0.73
RAB5C-202ENST00000393860 PMAIP1Q13794 54 aa10.45□□□□□ -0.74
RAB5C-202ENST00000393860 TPRXLQ17RH7 258 aa10.45□□□□□ -0.74
RAB5C-202ENST00000393860 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
RAB5C-202ENST00000393860 LPAP08519 4548 aa10.42□□□□□ -0.74
RAB5C-202ENST00000393860 BRK1Q8WUW1 75 aa10.39□□□□□ -0.75
RAB5C-202ENST00000393860 SPINK7P58062 85 aa10.39□□□□□ -0.75
RAB5C-202ENST00000393860 PCLOQ9Y6V0 5065 aa10.34□□□□□ -0.75
RAB5C-202ENST00000393860 LRP2P98164 4655 aa10.31□□□□□ -0.76
RAB5C-202ENST00000393860 COA5Q86WW8 74 aa10.31□□□□□ -0.76
RAB5C-202ENST00000393860 DMAC1Q96GE9 116 aa10.29□□□□□ -0.76
RAB5C-202ENST00000393860 ACYP2P14621 99 aa10.23□□□□□ -0.77
RAB5C-202ENST00000393860 KRTAP3-1Q9BYR8 98 aa10.16□□□□□ -0.78
RAB5C-202ENST00000393860 MPLKIPQ8TAP9 179 aa10.15□□□□□ -0.78
RAB5C-202ENST00000393860 HERC1Q15751 4861 aa10.15□□□□□ -0.78
RAB5C-202ENST00000393860 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
RAB5C-202ENST00000393860 COX6B2Q6YFQ2 88 aa10.1□□□□□ -0.79
RAB5C-202ENST00000393860 A8MUN3 132 aa10.09□□□□□ -0.79
RAB5C-202ENST00000393860 SEC61BP60468 96 aaKnown RBP10.08□□□□□ -0.8
RAB5C-202ENST00000393860 RBM12B-AS1Q9P1G2 102 aa10.05□□□□□ -0.8
RAB5C-202ENST00000393860 HMCN2Q8NDA2 5059 aa10.01□□□□□ -0.81
RAB5C-202ENST00000393860 KRTAP4-1Q9BYQ7 146 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms