RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
SCFD2-201ENST00000388940 FBN3Q75N90 2809 aa8.89□□□□□ -0.99
SCFD2-201ENST00000388940 A0A1B0GVX0 72 aa8.89□□□□□ -0.99
SCFD2-201ENST00000388940 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
SCFD2-201ENST00000388940 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
SCFD2-201ENST00000388940 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
SCFD2-201ENST00000388940 A8MU10 97 aa8.84□□□□□ -0.99
SCFD2-201ENST00000388940 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
SCFD2-201ENST00000388940 PRR4Q16378 134 aa8.83□□□□□ -1
SCFD2-201ENST00000388940 SSBP3-AS1Q7Z2R9 100 aa8.83□□□□□ -1
SCFD2-201ENST00000388940 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
SCFD2-201ENST00000388940 A6NN06 94 aa8.82□□□□□ -1
SCFD2-201ENST00000388940 KRTAP10-2P60368 255 aa8.82□□□□□ -1
SCFD2-201ENST00000388940 TGP01266 2768 aa8.82□□□□□ -1
SCFD2-201ENST00000388940 KRTAP21-3Q3LHN1 58 aa8.81□□□□□ -1
SCFD2-201ENST00000388940 Q8N9P0 234 aaPredicted RBP8.81□□□□□ -1
SCFD2-201ENST00000388940 FRAS1Q86XX4 4008 aa8.81□□□□□ -1
SCFD2-201ENST00000388940 MRPL34Q9BQ48 92 aaKnown RBP8.81□□□□□ -1
SCFD2-201ENST00000388940 Q75L30 129 aa8.8□□□□□ -1
SCFD2-201ENST00000388940 Q6ZSA8 131 aa8.79□□□□□ -1
SCFD2-201ENST00000388940 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
SCFD2-201ENST00000388940 C7orf65Q6ZTY9 151 aa8.78□□□□□ -1
SCFD2-201ENST00000388940 IGLV7-46A0A075B6I9 117 aa8.77□□□□□ -1.01
SCFD2-201ENST00000388940 A0A087X002 238 aa8.76□□□□□ -1.01
SCFD2-201ENST00000388940 LOC101927531A0A1B0GV80 90 aa8.76□□□□□ -1.01
SCFD2-201ENST00000388940 LCA10Q71F78 164 aa8.76□□□□□ -1.01
SCFD2-201ENST00000388940 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
SCFD2-201ENST00000388940 DNAH5Q8TE73 4624 aa8.76□□□□□ -1.01
SCFD2-201ENST00000388940 PRR15LQ9BU68 103 aa8.75□□□□□ -1.01
SCFD2-201ENST00000388940 DNAH11Q96DT5 4516 aa8.75□□□□□ -1.01
SCFD2-201ENST00000388940 CDC42SE1Q9NRR8 79 aa8.74□□□□□ -1.01
SCFD2-201ENST00000388940 ALMS1Q8TCU4 4167 aa8.74□□□□□ -1.01
SCFD2-201ENST00000388940 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
SCFD2-201ENST00000388940 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
SCFD2-201ENST00000388940 A6NED7 52 aa8.72□□□□□ -1.01
SCFD2-201ENST00000388940 C8orf87E5RJ46 101 aa8.71□□□□□ -1.02
SCFD2-201ENST00000388940 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
SCFD2-201ENST00000388940 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
SCFD2-201ENST00000388940 PKD1P98161 4303 aa8.67□□□□□ -1.02
SCFD2-201ENST00000388940 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
SCFD2-201ENST00000388940 COA5Q86WW8 74 aa8.64□□□□□ -1.03
SCFD2-201ENST00000388940 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
SCFD2-201ENST00000388940 Q5W150 140 aa8.62□□□□□ -1.03
SCFD2-201ENST00000388940 LINC00313P59037 77 aa8.61□□□□□ -1.03
SCFD2-201ENST00000388940 HYDINQ4G0P3 5121 aa8.6□□□□□ -1.03
SCFD2-201ENST00000388940 FAT2Q9NYQ8 4349 aa8.6□□□□□ -1.03
SCFD2-201ENST00000388940 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
SCFD2-201ENST00000388940 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
SCFD2-201ENST00000388940 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
SCFD2-201ENST00000388940 HRES1P13985 223 aa8.53□□□□□ -1.04
SCFD2-201ENST00000388940 H3BS24 57 aa8.53□□□□□ -1.04
SCFD2-201ENST00000388940 KRTAP16-1A8MUX0 517 aa8.52□□□□□ -1.05
SCFD2-201ENST00000388940 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
SCFD2-201ENST00000388940 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
SCFD2-201ENST00000388940 SPINK1P00995 79 aa8.49□□□□□ -1.05
SCFD2-201ENST00000388940 VPS13BQ7Z7G8 4022 aa8.48□□□□□ -1.05
SCFD2-201ENST00000388940 LINC01554Q52M75 96 aa8.46□□□□□ -1.05
SCFD2-201ENST00000388940 IGKV2-30P06310 120 aa8.46□□□□□ -1.06
SCFD2-201ENST00000388940 ACYP2P14621 99 aa8.44□□□□□ -1.06
SCFD2-201ENST00000388940 SPINK7P58062 85 aa8.44□□□□□ -1.06
SCFD2-201ENST00000388940 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
SCFD2-201ENST00000388940 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
SCFD2-201ENST00000388940 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
SCFD2-201ENST00000388940 RETNLBQ9BQ08 111 aa8.4□□□□□ -1.06
SCFD2-201ENST00000388940 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
SCFD2-201ENST00000388940 SACSQ9NZJ4 4579 aa8.38□□□□□ -1.07
SCFD2-201ENST00000388940 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
SCFD2-201ENST00000388940 A0A1B0GVY2 172 aa8.35□□□□□ -1.07
SCFD2-201ENST00000388940 PRAC1Q96KF2 57 aa8.35□□□□□ -1.07
SCFD2-201ENST00000388940 SMR3BP02814 79 aaPredicted RBP8.3□□□□□ -1.08
SCFD2-201ENST00000388940 DYNC1H1Q14204 4646 aaKnown RBP8.3□□□□□ -1.08
SCFD2-201ENST00000388940 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
SCFD2-201ENST00000388940 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
SCFD2-201ENST00000388940 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
SCFD2-201ENST00000388940 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
SCFD2-201ENST00000388940 APOBP04114 4563 aaKnown RBP8.2□□□□□ -1.1
SCFD2-201ENST00000388940 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
SCFD2-201ENST00000388940 A8MUU9 505 aa8.19□□□□□ -1.1
SCFD2-201ENST00000388940 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
SCFD2-201ENST00000388940 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
SCFD2-201ENST00000388940 A0A1B0GU69 56 aa8.15□□□□□ -1.1
SCFD2-201ENST00000388940 RYR2Q92736 4967 aa8.14□□□□□ -1.11
SCFD2-201ENST00000388940 C9orf92A6NGG3 77 aa8.12□□□□□ -1.11
SCFD2-201ENST00000388940 FAT1Q14517 4588 aa8.12□□□□□ -1.11
SCFD2-201ENST00000388940 KMT2CQ8NEZ4 4911 aaKnown RBP8.1□□□□□ -1.11
SCFD2-201ENST00000388940 CSAG1Q6PB30 78 aa8.09□□□□□ -1.12
SCFD2-201ENST00000388940 Q8N1X5 172 aa8.07□□□□□ -1.12
SCFD2-201ENST00000388940 MIR22HGQ0VDD5 57 aa8.06□□□□□ -1.12
SCFD2-201ENST00000388940 UQCR11O14957 56 aa8.06□□□□□ -1.12
SCFD2-201ENST00000388940 FLG2Q5D862 2391 aaPredicted RBP8.01□□□□□ -1.13
SCFD2-201ENST00000388940 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
SCFD2-201ENST00000388940 KRTAP3-1Q9BYR8 98 aa7.98□□□□□ -1.13
SCFD2-201ENST00000388940 Q5VSD8 79 aa7.93□□□□□ -1.14
SCFD2-201ENST00000388940 ROMO1P60602 79 aa7.91□□□□□ -1.14
SCFD2-201ENST00000388940 FAT3Q8TDW7 4589 aa7.9□□□□□ -1.14
SCFD2-201ENST00000388940 TNXBP22105 4242 aa7.9□□□□□ -1.15
SCFD2-201ENST00000388940 COX6B2Q6YFQ2 88 aa7.89□□□□□ -1.15
SCFD2-201ENST00000388940 RYR3Q15413 4870 aa7.88□□□□□ -1.15
SCFD2-201ENST00000388940 KRTAP25-1Q3LHN0 102 aa7.84□□□□□ -1.15
SCFD2-201ENST00000388940 HSPG2P98160 4391 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms