RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 TRACP01848 142 aa8.87□□□□□ -0.99
RPUSD3-201ENST00000383820 KRTAP10-10P60014 251 aa8.87□□□□□ -0.99
RPUSD3-201ENST00000383820 NAA38Q9BRA0 125 aaKnown RBP8.87□□□□□ -0.99
RPUSD3-201ENST00000383820 VPS25Q9BRG1 176 aa8.86□□□□□ -0.99
RPUSD3-201ENST00000383820 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
RPUSD3-201ENST00000383820 BATFQ16520 125 aa8.84□□□□□ -0.99
RPUSD3-201ENST00000383820 NOTCH2NLQ7Z3S9 236 aa8.84□□□□□ -0.99
RPUSD3-201ENST00000383820 CCKP06307 115 aa8.83□□□□□ -1
RPUSD3-201ENST00000383820 UBE2V1Q13404 147 aa8.83□□□□□ -1
RPUSD3-201ENST00000383820 LINC00472Q9H8W2 130 aa8.82□□□□□ -1
RPUSD3-201ENST00000383820 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
RPUSD3-201ENST00000383820 ATXN8Q156A1 80 aa8.8□□□□□ -1
RPUSD3-201ENST00000383820 RBM3P98179 157 aaKnown RBP8.79□□□□□ -1
RPUSD3-201ENST00000383820 MTURNQ8N3F0 131 aa8.79□□□□□ -1
RPUSD3-201ENST00000383820 DSCR8Q96T75 97 aa8.79□□□□□ -1
RPUSD3-201ENST00000383820 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
RPUSD3-201ENST00000383820 DEFB116Q30KQ4 102 aa8.78□□□□□ -1
RPUSD3-201ENST00000383820 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
RPUSD3-201ENST00000383820 LOC105371267A0A1B0GV96 52 aa8.75□□□□□ -1.01
RPUSD3-201ENST00000383820 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
RPUSD3-201ENST00000383820 LYRM7Q5U5X0 104 aa8.74□□□□□ -1.01
RPUSD3-201ENST00000383820 C9JAW5 83 aa8.72□□□□□ -1.01
RPUSD3-201ENST00000383820 A0A1B0GVX0 72 aa8.71□□□□□ -1.02
RPUSD3-201ENST00000383820 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
RPUSD3-201ENST00000383820 KRTAP19-6Q3LI70 58 aa8.68□□□□□ -1.02
RPUSD3-201ENST00000383820 SPINK7P58062 85 aa8.67□□□□□ -1.02
RPUSD3-201ENST00000383820 JMJD7-PLA2G4BH0Y9G9 81 aa8.66□□□□□ -1.02
RPUSD3-201ENST00000383820 MACF1Q9UPN3 7388 aaKnown RBP8.66□□□□□ -1.02
RPUSD3-201ENST00000383820 A8MWP4 228 aa8.64□□□□□ -1.03
RPUSD3-201ENST00000383820 J3KT08 172 aa8.64□□□□□ -1.03
RPUSD3-201ENST00000383820 C14orf132Q9NPU4 83 aa8.64□□□□□ -1.03
RPUSD3-201ENST00000383820 C21orf62-AS1Q17RA5 79 aa8.63□□□□□ -1.03
RPUSD3-201ENST00000383820 C9orf118A6NHY6 69 aa8.62□□□□□ -1.03
RPUSD3-201ENST00000383820 Q6ZQT0 140 aa8.62□□□□□ -1.03
RPUSD3-201ENST00000383820 Q8N9P0 234 aaPredicted RBP8.61□□□□□ -1.03
RPUSD3-201ENST00000383820 LOC110117498A0A087WWA1 95 aa8.59□□□□□ -1.03
RPUSD3-201ENST00000383820 A0A1W2PPM0 123 aa8.59□□□□□ -1.03
RPUSD3-201ENST00000383820 TAX1BP3O14907 124 aa8.59□□□□□ -1.03
RPUSD3-201ENST00000383820 SYNE2Q8WXH0 6885 aaKnown RBP8.58□□□□□ -1.04
RPUSD3-201ENST00000383820 PDE6GP18545 87 aa8.58□□□□□ -1.04
RPUSD3-201ENST00000383820 NDUFB1O75438 58 aa8.57□□□□□ -1.04
RPUSD3-201ENST00000383820 WFDC13Q8IUB5 93 aa8.56□□□□□ -1.04
RPUSD3-201ENST00000383820 H3BT86 120 aa8.53□□□□□ -1.04
RPUSD3-201ENST00000383820 SPCS1Q9Y6A9 102 aa8.51□□□□□ -1.05
RPUSD3-201ENST00000383820 A0A1B0GW54 56 aa8.5□□□□□ -1.05
RPUSD3-201ENST00000383820 NREPQ16612 68 aa8.5□□□□□ -1.05
RPUSD3-201ENST00000383820 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
RPUSD3-201ENST00000383820 KRTAP6-3Q3LI67 103 aa8.47□□□□□ -1.05
RPUSD3-201ENST00000383820 COL5A1-AS1Q5SY13 56 aa8.46□□□□□ -1.06
RPUSD3-201ENST00000383820 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
RPUSD3-201ENST00000383820 Q6ZVQ6 151 aa8.44□□□□□ -1.06
RPUSD3-201ENST00000383820 H1FX-AS1Q4G0G2 97 aa8.42□□□□□ -1.06
RPUSD3-201ENST00000383820 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
RPUSD3-201ENST00000383820 PRR15Q8IV56 129 aa8.39□□□□□ -1.07
RPUSD3-201ENST00000383820 BPY2O14599 106 aa8.37□□□□□ -1.07
RPUSD3-201ENST00000383820 K7EP34 96 aa8.36□□□□□ -1.07
RPUSD3-201ENST00000383820 K7EQZ3 153 aa8.36□□□□□ -1.07
RPUSD3-201ENST00000383820 TMEM254Q8TBM7 123 aa8.36□□□□□ -1.07
RPUSD3-201ENST00000383820 NDUFS5O43920 106 aa8.35□□□□□ -1.07
RPUSD3-201ENST00000383820 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
RPUSD3-201ENST00000383820 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
RPUSD3-201ENST00000383820 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
RPUSD3-201ENST00000383820 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
RPUSD3-201ENST00000383820 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
RPUSD3-201ENST00000383820 PRO0461Q9UI25 63 aa8.29□□□□□ -1.08
RPUSD3-201ENST00000383820 Q8N9L7 120 aa8.28□□□□□ -1.08
RPUSD3-201ENST00000383820 C7orf65Q6ZTY9 151 aa8.25□□□□□ -1.09
RPUSD3-201ENST00000383820 UBL5Q9BZL1 73 aa8.25□□□□□ -1.09
RPUSD3-201ENST00000383820 IGKV2D-30A0A075B6S6 120 aa8.23□□□□□ -1.09
RPUSD3-201ENST00000383820 IGKV2-30P06310 120 aa8.23□□□□□ -1.09
RPUSD3-201ENST00000383820 CASC2Q6XLA1 102 aa8.22□□□□□ -1.09
RPUSD3-201ENST00000383820 Q5W150 140 aa8.19□□□□□ -1.1
RPUSD3-201ENST00000383820 HCG22E2RYF7 251 aa8.18□□□□□ -1.1
RPUSD3-201ENST00000383820 F8W1H4 67 aa8.17□□□□□ -1.1
RPUSD3-201ENST00000383820 ETDBQ3ZM63 59 aa8.17□□□□□ -1.1
RPUSD3-201ENST00000383820 A6NN06 94 aa8.15□□□□□ -1.1
RPUSD3-201ENST00000383820 C4orf26Q17RF5 130 aa8.13□□□□□ -1.11
RPUSD3-201ENST00000383820 NEBP20929 6669 aa8.11□□□□□ -1.11
RPUSD3-201ENST00000383820 MT1BP07438 61 aa8.11□□□□□ -1.11
RPUSD3-201ENST00000383820 FAM236AA0A1B0GUQ0 79 aa8.1□□□□□ -1.11
RPUSD3-201ENST00000383820 FAM236BA0A1B0GV22 79 aa8.1□□□□□ -1.11
RPUSD3-201ENST00000383820 C5orf47Q569G3 176 aa8.09□□□□□ -1.11
RPUSD3-201ENST00000383820 Q5VV11 94 aa8.09□□□□□ -1.11
RPUSD3-201ENST00000383820 CXCL6P80162 114 aa8.07□□□□□ -1.12
RPUSD3-201ENST00000383820 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
RPUSD3-201ENST00000383820 SPRR2GQ9BYE4 73 aa8.06□□□□□ -1.12
RPUSD3-201ENST00000383820 MUC12Q9UKN1 5478 aa8.05□□□□□ -1.12
RPUSD3-201ENST00000383820 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
RPUSD3-201ENST00000383820 S4R3F8 94 aa8.02□□□□□ -1.13
RPUSD3-201ENST00000383820 KRTAP10-5P60370 271 aa8.01□□□□□ -1.13
RPUSD3-201ENST00000383820 KRTAP3-1Q9BYR8 98 aa8□□□□□ -1.13
RPUSD3-201ENST00000383820 KRTAP20-1Q3LI63 56 aa7.98□□□□□ -1.13
RPUSD3-201ENST00000383820 ACYP1P07311 99 aa7.95□□□□□ -1.14
RPUSD3-201ENST00000383820 KRTAP5-9P26371 169 aa7.95□□□□□ -1.14
RPUSD3-201ENST00000383820 LCA10Q71F78 164 aa7.95□□□□□ -1.14
RPUSD3-201ENST00000383820 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
RPUSD3-201ENST00000383820 TP53AIP1Q9HCN2 124 aa7.94□□□□□ -1.14
RPUSD3-201ENST00000383820 KLKP1Q107X0 134 aa7.93□□□□□ -1.14
RPUSD3-201ENST00000383820 HIST1H4AP62805 103 aaKnown RBP7.91□□□□□ -1.14
RPUSD3-201ENST00000383820 FAM240AA0A1B0GVK7 77 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms