RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 H3BQ85 93 aa7.05□□□□□ -1.28
SHOX-202ENST00000381575 RBM12B-AS1Q9P1G2 102 aa7.04□□□□□ -1.28
SHOX-202ENST00000381575 MT1FP04733 61 aa7.03□□□□□ -1.28
SHOX-202ENST00000381575 UBE2V1Q13404 147 aa7.03□□□□□ -1.28
SHOX-202ENST00000381575 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.29
SHOX-202ENST00000381575 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
SHOX-202ENST00000381575 SCGB1C2P0DMR2 95 aa7□□□□□ -1.29
SHOX-202ENST00000381575 RBM3P98179 157 aaKnown RBP6.99□□□□□ -1.29
SHOX-202ENST00000381575 COL5A1-AS1Q5SY13 56 aa6.99□□□□□ -1.29
SHOX-202ENST00000381575 FCGBPQ9Y6R7 5405 aaPredicted RBP6.99□□□□□ -1.29
SHOX-202ENST00000381575 C8orf87E5RJ46 101 aa6.98□□□□□ -1.29
SHOX-202ENST00000381575 LCE2BO14633 110 aa6.98□□□□□ -1.29
SHOX-202ENST00000381575 KRTAP9-7A8MTY7 169 aa6.97□□□□□ -1.29
SHOX-202ENST00000381575 KRTAP10-10P60014 251 aa6.97□□□□□ -1.29
SHOX-202ENST00000381575 BATFQ16520 125 aa6.97□□□□□ -1.29
SHOX-202ENST00000381575 DSCR8Q96T75 97 aa6.97□□□□□ -1.29
SHOX-202ENST00000381575 BAALC-AS2P0C853 105 aa6.95□□□□□ -1.3
SHOX-202ENST00000381575 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
SHOX-202ENST00000381575 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
SHOX-202ENST00000381575 C9JAW5 83 aa6.93□□□□□ -1.3
SHOX-202ENST00000381575 SPINK7P58062 85 aa6.93□□□□□ -1.3
SHOX-202ENST00000381575 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
SHOX-202ENST00000381575 NAA38Q9BRA0 125 aaKnown RBP6.93□□□□□ -1.3
SHOX-202ENST00000381575 A0A1B0GV90 55 aa6.92□□□□□ -1.3
SHOX-202ENST00000381575 Q6ZQT0 140 aa6.92□□□□□ -1.3
SHOX-202ENST00000381575 J3KT08 172 aa6.91□□□□□ -1.3
SHOX-202ENST00000381575 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
SHOX-202ENST00000381575 C8orf17Q9NRJ1 99 aa6.88□□□□□ -1.31
SHOX-202ENST00000381575 NDUFB1O75438 58 aa6.87□□□□□ -1.31
SHOX-202ENST00000381575 WFDC13Q8IUB5 93 aa6.87□□□□□ -1.31
SHOX-202ENST00000381575 Q8N9P0 234 aaPredicted RBP6.87□□□□□ -1.31
SHOX-202ENST00000381575 TAX1BP3O14907 124 aa6.86□□□□□ -1.31
SHOX-202ENST00000381575 LYRM7Q5U5X0 104 aa6.86□□□□□ -1.31
SHOX-202ENST00000381575 IGKV3D-7A0A0C4DH55 119 aa6.85□□□□□ -1.31
SHOX-202ENST00000381575 A8MWP4 228 aa6.84□□□□□ -1.31
SHOX-202ENST00000381575 ATXN8Q156A1 80 aa6.84□□□□□ -1.31
SHOX-202ENST00000381575 C21orf62-AS1Q17RA5 79 aa6.84□□□□□ -1.31
SHOX-202ENST00000381575 C14orf132Q9NPU4 83 aa6.83□□□□□ -1.32
SHOX-202ENST00000381575 LOC110117498A0A087WWA1 95 aa6.82□□□□□ -1.32
SHOX-202ENST00000381575 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
SHOX-202ENST00000381575 JMJD7-PLA2G4BH0Y9G9 81 aa6.81□□□□□ -1.32
SHOX-202ENST00000381575 Q6ZVQ6 151 aa6.81□□□□□ -1.32
SHOX-202ENST00000381575 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
SHOX-202ENST00000381575 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
SHOX-202ENST00000381575 A0A1W2PPM0 123 aa6.76□□□□□ -1.33
SHOX-202ENST00000381575 GTF2H5Q6ZYL4 71 aa6.76□□□□□ -1.33
SHOX-202ENST00000381575 A0A1B0GW54 56 aa6.75□□□□□ -1.33
SHOX-202ENST00000381575 PDE6GP18545 87 aa6.75□□□□□ -1.33
SHOX-202ENST00000381575 NREPQ16612 68 aa6.75□□□□□ -1.33
SHOX-202ENST00000381575 K7EP34 96 aa6.73□□□□□ -1.33
SHOX-202ENST00000381575 MRPL34Q9BQ48 92 aaKnown RBP6.73□□□□□ -1.33
SHOX-202ENST00000381575 NDUFS5O43920 106 aa6.72□□□□□ -1.33
SHOX-202ENST00000381575 TMEM254Q8TBM7 123 aa6.72□□□□□ -1.33
SHOX-202ENST00000381575 SPCS1Q9Y6A9 102 aa6.72□□□□□ -1.33
SHOX-202ENST00000381575 K7EQZ3 153 aa6.71□□□□□ -1.33
SHOX-202ENST00000381575 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.33
SHOX-202ENST00000381575 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
SHOX-202ENST00000381575 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
SHOX-202ENST00000381575 IGKV2D-30A0A075B6S6 120 aa6.68□□□□□ -1.34
SHOX-202ENST00000381575 IGKV2-30P06310 120 aa6.68□□□□□ -1.34
SHOX-202ENST00000381575 H1FX-AS1Q4G0G2 97 aa6.68□□□□□ -1.34
SHOX-202ENST00000381575 Q5W150 140 aa6.66□□□□□ -1.34
SHOX-202ENST00000381575 LINC00846Q9NV44 126 aa6.65□□□□□ -1.35
SHOX-202ENST00000381575 Q8N9L7 120 aa6.64□□□□□ -1.35
SHOX-202ENST00000381575 SYNE2Q8WXH0 6885 aaKnown RBP6.64□□□□□ -1.35
SHOX-202ENST00000381575 F8W1H4 67 aa6.63□□□□□ -1.35
SHOX-202ENST00000381575 BPY2O14599 106 aa6.62□□□□□ -1.35
SHOX-202ENST00000381575 H3BT86 120 aa6.61□□□□□ -1.35
SHOX-202ENST00000381575 C7orf65Q6ZTY9 151 aa6.61□□□□□ -1.35
SHOX-202ENST00000381575 PRO0461Q9UI25 63 aa6.59□□□□□ -1.35
SHOX-202ENST00000381575 HCG22E2RYF7 251 aa6.57□□□□□ -1.36
SHOX-202ENST00000381575 C4orf26Q17RF5 130 aa6.57□□□□□ -1.36
SHOX-202ENST00000381575 CASC2Q6XLA1 102 aa6.57□□□□□ -1.36
SHOX-202ENST00000381575 K7ERU9 68 aa6.54□□□□□ -1.36
SHOX-202ENST00000381575 SMCPP49901 116 aaPredicted RBP6.53□□□□□ -1.36
SHOX-202ENST00000381575 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
SHOX-202ENST00000381575 J3QR89 54 aa6.51□□□□□ -1.37
SHOX-202ENST00000381575 ETDBQ3ZM63 59 aa6.51□□□□□ -1.37
SHOX-202ENST00000381575 KRTAP3-3Q9BYR6 98 aa6.48□□□□□ -1.37
SHOX-202ENST00000381575 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
SHOX-202ENST00000381575 CXCL6P80162 114 aa6.47□□□□□ -1.37
SHOX-202ENST00000381575 FAM236AA0A1B0GUQ0 79 aa6.46□□□□□ -1.37
SHOX-202ENST00000381575 FAM236BA0A1B0GV22 79 aa6.46□□□□□ -1.37
SHOX-202ENST00000381575 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.37
SHOX-202ENST00000381575 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.37
SHOX-202ENST00000381575 S4R3F8 94 aa6.44□□□□□ -1.38
SHOX-202ENST00000381575 UBL5Q9BZL1 73 aa6.42□□□□□ -1.38
SHOX-202ENST00000381575 MT1BP07438 61 aa6.41□□□□□ -1.38
SHOX-202ENST00000381575 C1orf64Q8NEQ6 169 aa6.41□□□□□ -1.38
SHOX-202ENST00000381575 LCA10Q71F78 164 aa6.4□□□□□ -1.39
SHOX-202ENST00000381575 A6NN06 94 aa6.37□□□□□ -1.39
SHOX-202ENST00000381575 Q5VV11 94 aa6.36□□□□□ -1.39
SHOX-202ENST00000381575 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
SHOX-202ENST00000381575 FAM240AA0A1B0GVK7 77 aa6.34□□□□□ -1.39
SHOX-202ENST00000381575 ACYP1P07311 99 aa6.33□□□□□ -1.4
SHOX-202ENST00000381575 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
SHOX-202ENST00000381575 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
SHOX-202ENST00000381575 MUC12Q9UKN1 5478 aa6.31□□□□□ -1.4
SHOX-202ENST00000381575 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
SHOX-202ENST00000381575 A0A087WVE0 104 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms